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PDB: 444 results

3A7G
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Human MST3 kinase
Descriptor: Serine/threonine kinase 24 (STE20 homolog, yeast)
Authors:Ko, T.P, Jeng, W.Y, Liu, C.I, Lai, M.D, Wang, A.H.J.
Deposit date:2009-09-26
Release date:2010-02-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of human MST3 kinase in complex with adenine, ADP and Mn2+.
Acta Crystallogr.,Sect.D, 66, 2010
1UAQ
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The crystal structure of yeast cytosine deaminase
Descriptor: DIHYDROPYRIMIDINE-2,4(1H,3H)-DIONE, ZINC ION, cytosine deaminase
Authors:Ko, T.-P, Lin, J.-J, Hu, C.-Y, Hsu, Y.-H, Wang, A.H.-J, Liaw, S.-H.
Deposit date:2003-03-14
Release date:2003-04-29
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of yeast cytosine deaminase. Insights into enzyme mechanism and evolution
J.Biol.Chem., 278, 2003
1WD0
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Crystal structures of the hyperthermophilic chromosomal protein Sac7d in complex with DNA decamers
Descriptor: 5'-D(*CP*CP*TP*AP*TP*AP*TP*AP*GP*G)-3', DNA-binding proteins 7a/7b/7d
Authors:Ko, T.-P, Chu, H.-M, Chen, C.-Y, Chou, C.-C, Wang, A.H.-J.
Deposit date:2004-05-10
Release date:2004-08-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of the hyperthermophilic chromosomal protein Sac7d in complex with DNA decamers.
Acta Crystallogr.,Sect.D, 60, 2004
1WD1
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Crystal structures of the hyperthermophilic chromosomal protein Sac7d in complex with DNA decamers
Descriptor: 5'-D(*CP*CP*TP*AP*CP*GP*TP*AP*GP*G)-3', DNA-binding proteins 7a/7b/7d
Authors:Ko, T.-P, Chu, H.-M, Chen, C.-Y, Chou, C.-C, Wang, A.H.-J.
Deposit date:2004-05-10
Release date:2004-08-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of the hyperthermophilic chromosomal protein Sac7d in complex with DNA decamers.
Acta Crystallogr.,Sect.D, 60, 2004
3LBM
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D-sialic acid aldolase
Descriptor: N-acetylneuraminate lyase, SULFATE ION
Authors:Ko, T.-P, Chou, C.-Y, Wang, A.H.-J.
Deposit date:2010-01-08
Release date:2011-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Modulation of substrate specificities of D-sialic acid aldolase through single mutations of Val251
To be Published
3A7F
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Human MST3 kinase
Descriptor: Serine/threonine kinase 24 (STE20 homolog, yeast)
Authors:Ko, T.P, Jeng, W.Y, Liu, C.I, Lai, M.D, Wang, A.H.J.
Deposit date:2009-09-26
Release date:2010-02-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structures of human MST3 kinase in complex with adenine, ADP and Mn2+.
Acta Crystallogr.,Sect.D, 66, 2010
5Z6O
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Crystal structure of Penicillium cyclopium protease
Descriptor: CALCIUM ION, phenylmethanesulfonic acid, protease
Authors:Ko, T.-P, Koszelak, S, Ng, J, Day, J, Greenwood, A, McPherson, A.
Deposit date:2018-01-24
Release date:2018-02-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The crystallographic structure of the subtilisin protease from Penicillium cyclopium.
Biochemistry, 36, 1997
5ZLR
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Structure of NeuC
Descriptor: GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (Hydrolyzing), LITHIUM ION, SULFATE ION
Authors:Ko, T.P, Hsieh, T.J, Yang, C.S, Chen, Y.
Deposit date:2018-03-29
Release date:2018-05-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:The tetrameric structure of sialic acid-synthesizing UDP-GlcNAc 2-epimerase fromAcinetobacter baumannii: A comparative study with human GNE.
J. Biol. Chem., 293, 2018
6ACS
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poly-cis-prenyltransferase
Descriptor: CITRIC ACID, Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific), GLYCEROL, ...
Authors:Ko, T.-P, Chen, Y.
Deposit date:2018-07-27
Release date:2018-12-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structure of undecaprenyl pyrophosphate synthase from Acinetobacter baumannii
Acta Crystallogr F Struct Biol Commun, 74, 2018
5ZLT
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Crystal structure of UDP-GlcNAc 2-epimerase NeuC complexed with UDP
Descriptor: GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (Hydrolyzing), SULFATE ION, URIDINE-5'-DIPHOSPHATE
Authors:Ko, T.P, Hsieh, T.J, Yang, C.S, Chen, Y.
Deposit date:2018-03-29
Release date:2018-05-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The tetrameric structure of sialic acid-synthesizing UDP-GlcNAc 2-epimerase fromAcinetobacter baumannii: A comparative study with human GNE.
J. Biol. Chem., 293, 2018
5YEQ
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The structure of Sac-KARI protein
Descriptor: 1,2-ETHANEDIOL, Ketol-acid reductoisomerase (NADP(+)), MAGNESIUM ION, ...
Authors:Ko, T.P, Chen, C.Y, Lin, K.F, Lin, B.L, Huang, C.H, Chiang, C.H, Horng, J.C, Tsai, M.D.
Deposit date:2017-09-19
Release date:2018-07-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:NADH/NADPH bi-cofactor-utilizing and thermoactive ketol-acid reductoisomerase from Sulfolobus acidocaldarius
Sci Rep, 8, 2018
6JC5
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Crystal structure of the blue fluorescent protein with a Leu-Leu-Gly tri-peptide chromophore derived from the purple chromoprotein of Stichodactyla haddoni
Descriptor: shBFP
Authors:Ko, T.P, Huang, K.F, Chang, H.Y.
Deposit date:2019-01-28
Release date:2019-03-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.051 Å)
Cite:Crystal structure of the blue fluorescent protein with a Leu-Leu-Gly tri-peptide chromophore derived from the purple chromoprotein of Stichodactyla haddoni.
Int. J. Biol. Macromol., 130, 2019
6JC6
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Crystal structure of the purple chromoprotein of Stichodactyla haddoni with a Glu-Tyr-Gly tri-peptide chromophore
Descriptor: shCP
Authors:Ko, T.P, Huang, K.F, Chang, H.Y.
Deposit date:2019-01-28
Release date:2019-03-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the blue fluorescent protein with a Leu-Leu-Gly tri-peptide chromophore derived from the purple chromoprotein of Stichodactyla haddoni.
Int. J. Biol. Macromol., 130, 2019
7CEI
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THE ENDONUCLEASE DOMAIN OF COLICIN E7 IN COMPLEX WITH ITS INHIBITOR IM7 PROTEIN
Descriptor: PROTEIN (COLICIN E7 IMMUNITY PROTEIN), ZINC ION
Authors:Ko, T.P, Liao, C.C, Ku, W.Y, Chak, K.F, Yuan, H.S.
Deposit date:1998-09-17
Release date:1999-09-17
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of the DNase domain of colicin E7 in complex with its inhibitor Im7 protein.
Structure Fold.Des., 7, 1999
7EBL
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Bacterial STING in complex with c-di-GMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), STING
Authors:Ko, T.-P, Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
Deposit date:2021-03-10
Release date:2021-09-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Crystal structure and functional implication of bacterial STING.
Nat Commun, 13, 2022
7EBD
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Bacterial STING in complex with c-di-GMP
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), ACETATE ION, TIR-like domain-containing protein
Authors:Ko, T.-P, Wang, Y.-C, Yang, C.-S, Hou, M.-H, Chen, Y.
Deposit date:2021-03-09
Release date:2021-09-15
Last modified:2022-01-19
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure and functional implication of bacterial STING.
Nat Commun, 13, 2022
7DD0
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BU of 7dd0 by Molmil
Crystal structure of the N-terminal domain of TagH from Bacillus subtilis
Descriptor: Teichoic acids export ATP-binding protein TagH
Authors:Ko, T.P, Yang, C.S, Wang, Y.C, Chen, Y.
Deposit date:2020-10-27
Release date:2020-12-23
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the N-terminal domain of TagH reveals a potential drug targeting site.
Biochem.Biophys.Res.Commun., 536, 2020
3TAT
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BU of 3tat by Molmil
TYROSINE AMINOTRANSFERASE FROM E. COLI
Descriptor: PYRIDOXAL-5'-PHOSPHATE, TYROSINE AMINOTRANSFERASE
Authors:Ko, T.P, Yang, W.Z, Wu, S.P, Tsai, H, Yuan, H.S.
Deposit date:1998-08-12
Release date:1999-08-12
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystallization and preliminary crystallographic analysis of the Escherichia coli tyrosine aminotransferase.
Acta Crystallogr.,Sect.D, 55, 1999
7YIB
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BU of 7yib by Molmil
Crystal structure of wild-type Cap4 SAVED domain-containing receptor from Enterobacter cloacae
Descriptor: CD-NTase-associated protein 4, CHLORIDE ION
Authors:Ko, T.-P, Yang, C.-S, Hou, M.-H, Wang, Y.-C, Chen, Y.
Deposit date:2022-07-15
Release date:2023-05-31
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Specific recognition of cyclic oligonucleotides by Cap4 for phage infection.
Int.J.Biol.Macromol., 237, 2023
7YIA
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Crystal structure of K74A mutant of Cap4 SAVED domain-containing receptor from Enterobacter cloacae
Descriptor: CD-NTase-associated protein 4, MAGNESIUM ION
Authors:Ko, T.-P, Yang, C.-S, Hou, M.-H, Wang, Y.-C, Chen, Y.
Deposit date:2022-07-15
Release date:2023-05-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.428 Å)
Cite:Specific recognition of cyclic oligonucleotides by Cap4 for phage infection.
Int.J.Biol.Macromol., 237, 2023
5CUY
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Crystal structure of Trypanosoma brucei Vacuolar Soluble Pyrophosphatases in apo form
Descriptor: Acidocalcisomal pyrophosphatase, CITRIC ACID, MAGNESIUM ION
Authors:Yang, Y.Y, Ko, T.P, Liu, W.D, Zheng, Y.Y, Chen, C.C, Guo, R.T.
Deposit date:2015-07-25
Release date:2016-03-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Trypanosoma cruzi protein in complex with ligand
Acs Chem.Biol., 2016
5DBF
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BU of 5dbf by Molmil
Crystal Structure of Iridoid Synthase from Cantharanthus roseus in complex with NADPH
Descriptor: Iridoid synthase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Hu, Y.M, Liu, W.D, Zheng, Y.Y, Xu, Z.X, Ko, T.P, Chen, C.C, Guo, R.T.
Deposit date:2015-08-21
Release date:2015-11-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of Iridoid Synthase from Cantharanthus roseus with Bound NAD(+) , NADPH, or NAD(+) /10-Oxogeranial: Reaction Mechanisms
Angew.Chem.Int.Ed.Engl., 54, 2015
5CUU
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Crystal structure of Trypanosoma cruzi Vacuolar Soluble Pyrophosphatases in complex with bisphosphonate inhibitor BPH-1260
Descriptor: 1-butyl-3-(2-hydroxy-2,2-diphosphonoethyl)-1H-imidazol-3-ium, Acidocalcisomal pyrophosphatase, D-MALATE, ...
Authors:Liu, W.D, Yang, Y.Y, Ko, T.P, Zheng, Y.Y, Chen, C.C, Guo, R.T.
Deposit date:2015-07-25
Release date:2016-03-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:Crystal structure of Trypanosoma cruzi protein in complex with ligand
Acs Chem.Biol., 2016
5DBI
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Crystal Structure of Iridoid Synthase from Cantharanthus roseus in complex with NAD+ and 10-oxogeranial
Descriptor: (2E,6E)-2,6-dimethylocta-2,6-dienedial, Iridoid synthase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Hu, Y.M, Liu, W.D, Zheng, Y.Y, Xu, Z.X, Ko, T.P, Chen, C.C, Guo, R.T.
Deposit date:2015-08-21
Release date:2015-11-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of Iridoid Synthase from Cantharanthus roseus with Bound NAD(+) , NADPH, or NAD(+) /10-Oxogeranial: Reaction Mechanisms
Angew.Chem.Int.Ed.Engl., 54, 2015
3X0T
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Crystal structure of PirA
Descriptor: NITRATE ION, Uncharacterized protein
Authors:Wang, H.C, Ko, T.P, Wang, A.H.J, Lo, C.F.
Deposit date:2014-10-22
Release date:2015-08-26
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:The opportunistic marine pathogen Vibrio parahaemolyticus becomes virulent by acquiring a plasmid that expresses a deadly toxin.
Proc.Natl.Acad.Sci.USA, 112, 2015

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