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PDB: 21 件

5CA5
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Structure of the C. elegans NONO-1 homodimer
分子名称: 1,2-ETHANEDIOL, NONO-1
著者Knott, G.J, Bond, C.S.
登録日2015-06-29
公開日2015-12-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Caenorhabditis elegans NONO-1: Insights into DBHS protein structure, architecture, and function.
Protein Sci., 24, 2015
6VPC
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BU of 6vpc by Molmil
Structure of the SpCas9 DNA adenine base editor - ABE8e
分子名称: CRISPR-associated endonuclease Cas9, Cas9 (SpCas9) single-guide RNA (sgRNA), DNA non-target strand (NTS), ...
著者Knott, G.J, Lapinaite, A, Doudna, J.A.
登録日2020-02-03
公開日2020-07-29
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献DNA capture by a CRISPR-Cas9-guided adenine base editor.
Science, 369, 2020
5W1H
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BU of 5w1h by Molmil
Crystal structure of LbaCas13a (C2c2) bound to mature crRNA (24-nt spacer)
分子名称: GLYCEROL, IODIDE ION, LbaCas13a (C2c2), ...
著者Knott, G.J, Doudna, J.A.
登録日2017-06-03
公開日2017-09-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Guide-bound structures of an RNA-targeting A-cleaving CRISPR-Cas13a enzyme.
Nat. Struct. Mol. Biol., 24, 2017
5W1I
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Crystal structure of LbaCas13a (C2c2) bound to mature crRNA (20-nt spacer)
分子名称: IODIDE ION, LbaCas13a (C2c2), mature crRNA
著者Knott, G.J, Doudna, J.A.
登録日2017-06-03
公開日2017-09-13
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Guide-bound structures of an RNA-targeting A-cleaving CRISPR-Cas13a enzyme.
Nat. Struct. Mol. Biol., 24, 2017
5WLH
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Crystal structure of LbaCas13a H328A (C2c2) bound to pre-crRNA (24-nt spacer)
分子名称: GLYCEROL, IODIDE ION, LbaCas13a H328A (C2c2), ...
著者Knott, G.J, Doudna, J.A.
登録日2017-07-26
公開日2017-09-13
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.80001032 Å)
主引用文献Guide-bound structures of an RNA-targeting A-cleaving CRISPR-Cas13a enzyme.
Nat. Struct. Mol. Biol., 24, 2017
5IFN
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BU of 5ifn by Molmil
Human PSPC1 Homodimer
分子名称: Paraspeckle component 1
著者Knott, G.J, Passon, D.M, Bond, C.S.
登録日2016-02-26
公開日2017-08-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.17 Å)
主引用文献Human PSPC1 Homodimer
To Be Published
5IFM
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BU of 5ifm by Molmil
Human NONO (p54nrb) Homodimer
分子名称: CHLORIDE ION, GLYCEROL, Non-POU domain-containing octamer-binding protein, ...
著者Knott, G.J, Bond, C.S.
登録日2016-02-26
公開日2016-11-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A crystallographic study of human NONO (p54(nrb)): overcoming pathological problems with purification, data collection and noncrystallographic symmetry.
Acta Crystallogr D Struct Biol, 72, 2016
6P7M
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Cryo-EM structure of LbCas12a-crRNA: AcrVA4 (1:2 complex)
分子名称: Cas12a, MAGNESIUM ION, anti-CRISPR VA4, ...
著者Knott, G.J, Liu, J.J, Doudna, J.A.
登録日2019-06-06
公開日2019-08-21
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis for AcrVA4 inhibition of specific CRISPR-Cas12a.
Elife, 8, 2019
6P7N
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Cryo-EM structure of LbCas12a-crRNA: AcrVA4 (2:2 complex)
分子名称: Cas12a, MAGNESIUM ION, anti-CRISPR VA4, ...
著者Knott, G.J, Liu, J.J, Doudna, J.A.
登録日2019-06-06
公開日2019-08-21
最終更新日2023-08-16
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Structural basis for AcrVA4 inhibition of specific CRISPR-Cas12a.
Elife, 8, 2019
7THB
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Crystal structure of an RNA-5'/DNA-3' strand exchange junction
分子名称: DNA (5'-D(*GP*AP*TP*GP*CP*TP*C)-3'), DNA (5'-D(*GP*TP*AP*AP*GP*CP*AP*GP*CP*AP*TP*C)-3'), RNA (5'-R(*AP*GP*CP*UP*UP*AP*C)-3')
著者Cofsky, J.C, Knott, G.J, Gee, C.L, Doudna, J.A.
登録日2022-01-10
公開日2022-04-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Crystal structure of an RNA/DNA strand exchange junction.
Plos One, 17, 2022
7S37
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Cas9:sgRNA (S. pyogenes) in the open-protein conformation
分子名称: CRISPR-associated endonuclease Cas9/Csn1, Single-guide RNA
著者Cofsky, J.C, Soczek, K.M, Knott, G.J, Nogales, E, Doudna, J.A.
登録日2021-09-04
公開日2022-04-20
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献CRISPR-Cas9 bends and twists DNA to read its sequence.
Nat.Struct.Mol.Biol., 29, 2022
7S38
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Cas9:sgRNA:DNA (S. pyogenes) forming a 3-base-pair R-loop
分子名称: CRISPR-associated endonuclease Cas9/Csn1, Non-target DNA strand, Single-guide RNA, ...
著者Cofsky, J.C, Soczek, K.M, Knott, G.J, Nogales, E, Doudna, J.A.
登録日2021-09-04
公開日2022-04-20
最終更新日2022-05-04
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献CRISPR-Cas9 bends and twists DNA to read its sequence.
Nat.Struct.Mol.Biol., 29, 2022
7S3H
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BU of 7s3h by Molmil
Cas9:sgRNA:DNA (S. pyogenes) with 0 RNA:DNA base pairs, open-protein/linear-DNA conformation
分子名称: CRISPR-associated endonuclease Cas9/Csn1, Non-target DNA strand, Single-guide RNA, ...
著者Cofsky, J.C, Soczek, K.M, Knott, G.J, Nogales, E, Doudna, J.A.
登録日2021-09-06
公開日2022-04-20
最終更新日2022-05-04
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献CRISPR-Cas9 bends and twists DNA to read its sequence.
Nat.Struct.Mol.Biol., 29, 2022
7S36
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BU of 7s36 by Molmil
Cas9:sgRNA:DNA (S. pyogenes) with 0 RNA:DNA base pairs, closed-protein/bent-DNA conformation
分子名称: CRISPR-associated endonuclease Cas9/Csn1, Non-target DNA strand, Single-guide RNA, ...
著者Cofsky, J.C, Soczek, K.M, Knott, G.J, Nogales, E, Doudna, J.A.
登録日2021-09-04
公開日2022-04-20
最終更新日2022-05-04
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献CRISPR-Cas9 bends and twists DNA to read its sequence.
Nat.Struct.Mol.Biol., 29, 2022
6X0Q
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BU of 6x0q by Molmil
A Circular Permutant of the Tobacco Mosaic Virus (TMV) mutant Q101H coordinated with heme
分子名称: Capsid protein Circular Permutant, PROTOPORPHYRIN IX CONTAINING FE
著者Dai, J, Knott, G.J, Francis, M.B.
登録日2020-05-17
公開日2020-12-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Protein-Embedded Metalloporphyrin Arrays Templated by Circularly Permuted Tobacco Mosaic Virus Coat Proteins.
Acs Nano, 15, 2021
6X0R
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BU of 6x0r by Molmil
A Circular Permutant of the Tobacco Mosaic Virus (TMV) mutant Q101H
分子名称: Capsid protein Circular Permutant
著者Dai, J, Knott, G.J, Francis, M.B.
登録日2020-05-17
公開日2020-12-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Protein-Embedded Metalloporphyrin Arrays Templated by Circularly Permuted Tobacco Mosaic Virus Coat Proteins.
Acs Nano, 15, 2021
5VVK
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BU of 5vvk by Molmil
Cas1-Cas2 bound to full-site mimic
分子名称: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (5'-D(*GP*AP*CP*CP*AP*CP*CP*AP*GP*TP*G)-3'), ...
著者Wright, A.V, Knott, G.J, Doxzen, K.D, Doudna, J.A.
登録日2017-05-19
公開日2017-08-02
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structures of the CRISPR genome integration complex.
Science, 357, 2017
5VVJ
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BU of 5vvj by Molmil
Cas1-Cas2 bound to half-site intermediate
分子名称: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (112-MER), ...
著者Wright, A.V, Knott, G.J, Doxzen, K.W, Doudna, J.A.
登録日2017-05-19
公開日2017-08-02
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.89 Å)
主引用文献Structures of the CRISPR genome integration complex.
Science, 357, 2017
7LRU
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BU of 7lru by Molmil
Crystal structure of SFPQ-NONO-SFPQ chimeric protein homodimer
分子名称: Splicing factor, proline- and glutamine-rich,Isoform 2 of Non-POU domain-containing octamer-binding protein,Isoform Short of Splicing factor, proline- and glutamine-rich
著者Marshall, A.C, Bond, C.S, Mohnen, I, Knott, G.J.
登録日2021-02-17
公開日2021-05-12
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of SFPQ-NONO-SFPQ chimeric protein homodimer
To Be Published
5VGB
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BU of 5vgb by Molmil
Crystal structure of NmeCas9 HNH domain bound to anti-CRISPR AcrIIC1
分子名称: Anti-CRISPR protein (AcrIIC1), CRISPR-associated endonuclease Cas9, GLYCEROL, ...
著者Harrington, L.B, Doxzen, K.W, Ma, E, Knott, G.J, Kranzusch, P.J, Doudna, J.A.
登録日2017-04-10
公開日2017-08-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.497 Å)
主引用文献A Broad-Spectrum Inhibitor of CRISPR-Cas9.
Cell, 170, 2017
5VVL
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BU of 5vvl by Molmil
Cas1-Cas2 bound to full-site mimic with Ni
分子名称: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (11-MER), ...
著者Wright, A.V, Knott, G.J, Doxzen, K.D, Doudna, J.A.
登録日2017-05-19
公開日2017-08-02
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.31 Å)
主引用文献Structures of the CRISPR genome integration complex.
Science, 357, 2017

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