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PDB: 1653 results

6SDO
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BU of 6sdo by Molmil
Trypanosoma cruzi farnesyl diphosphate synthase in complex with 3np
Descriptor: 3-nitrophenol, Farnesyl diphosphate synthase, SULFATE ION, ...
Authors:Magari, F, Heine, A, Klebe, G.
Deposit date:2019-07-29
Release date:2020-08-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Trypanosoma cruzi farnesyl diphosphate synthase in complex with 3np
To Be Published
6SEY
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BU of 6sey by Molmil
Human Carbonic Anhydrase II in complex with aliphatically substituted benzenesulfonamide
Descriptor: (4-CARBOXYPHENYL)(CHLORO)MERCURY, 4-(4-oxidanylbutyl)benzenesulfonamide, Carbonic anhydrase 2, ...
Authors:Gloeckner, S, Ngo, K, Heine, A, Klebe, G.
Deposit date:2019-07-30
Release date:2020-08-26
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Human Carbonic Anhydrase II in complex with aliphatically substituted benzenesulfonamide
To Be Published
6SAC
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BU of 6sac by Molmil
N-terminal expression tag remainder of human Carbonic Anhydrase II covalently modified by fragment
Descriptor: (4-CARBOXYPHENYL)(CHLORO)MERCURY, 1-(1,3-dimethyl-1H-pyrazol-5-yl)methanamine, Carbonic anhydrase 2, ...
Authors:Gloeckner, S, Heine, A, Klebe, G.
Deposit date:2019-07-16
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:A Proof-of-Concept Fragment Screening of a Hit-Validated 96-Compounds Library against Human Carbonic Anhydrase II.
Biomolecules, 10, 2020
6SFA
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BU of 6sfa by Molmil
Trypanosoma cruzi farnesyl diphosphate synthase apo structure with Mn ions
Descriptor: Farnesyl diphosphate synthase, MANGANESE (II) ION, SULFATE ION
Authors:Magari, F, Heine, A, Klebe, G.
Deposit date:2019-08-01
Release date:2020-08-26
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Trypanosoma cruzi farnesyl diphosphate synthase apo structure with Mn ions
To Be Published
6RJJ
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BU of 6rjj by Molmil
Human Carbonic Anhydrase II in complex with fluorinated benzenesulfonamide
Descriptor: (4-CARBOXYPHENYL)(CHLORO)MERCURY, 2,3-bis(fluoranyl)benzenesulfonamide, Carbonic anhydrase 2, ...
Authors:Gloeckner, S, Heine, A, Klebe, G.
Deposit date:2019-04-27
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.056 Å)
Cite:The Influence of Varying Fluorination Patterns on the Thermodynamics and Kinetics of Benzenesulfonamide Binding to Human Carbonic Anhydrase II.
Biomolecules, 10, 2020
6RQI
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BU of 6rqi by Molmil
Human Carbonic Anhydrase II in complex with fluorinated benzenesulfonamide
Descriptor: (4-CARBOXYPHENYL)(CHLORO)MERCURY, 3-fluorobenzenesulfonamide, Carbonic anhydrase 2, ...
Authors:Gloeckner, S, Heine, A, Klebe, G.
Deposit date:2019-05-15
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:The Influence of Varying Fluorination Patterns on the Thermodynamics and Kinetics of Benzenesulfonamide Binding to Human Carbonic Anhydrase II.
Biomolecules, 10, 2020
6RSV
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BU of 6rsv by Molmil
Endothiapepsin in complex with 017
Descriptor: 1~{H}-1,2,3,4-tetrazol-5-ylmethyldiazane, DIMETHYL SULFOXIDE, Endothiapepsin, ...
Authors:Magari, F, Heine, A, Klebe, G.
Deposit date:2019-05-22
Release date:2020-07-08
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Endothiapepsin in complex with 017
To Be Published
6ROE
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BU of 6roe by Molmil
Human Carbonic Anhydrase II in complex with fluorinated benzenesulfonamide
Descriptor: (4-CARBOXYPHENYL)(CHLORO)MERCURY, 2,6-DIFLUOROBENZENESULFONAMIDE, Carbonic anhydrase 2, ...
Authors:Gloeckner, S, Heine, A, Klebe, G.
Deposit date:2019-05-12
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (0.939 Å)
Cite:The Influence of Varying Fluorination Patterns on the Thermodynamics and Kinetics of Benzenesulfonamide Binding to Human Carbonic Anhydrase II.
Biomolecules, 10, 2020
3LJO
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BU of 3ljo by Molmil
Bovine trypsin in complex with UB-THR 11
Descriptor: (S)-N-(4-carbamimidoylbenzyl)-1-(2-(cyclohexylamino)ethanoyl)pyrrolidine-2-carboxamide, CALCIUM ION, Cationic trypsin, ...
Authors:Wegscheid-Gerlach, C, Heine, A, Klebe, G.
Deposit date:2010-01-26
Release date:2010-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Congeneric but still distinct: how closely related trypsin ligands exhibit different thermodynamic and structural properties.
J.Mol.Biol., 405, 2011
6RNP
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BU of 6rnp by Molmil
Human Carbonic Anhydrase II in complex with fluorinated benzenesulfonamide
Descriptor: (4-CARBOXYPHENYL)(CHLORO)MERCURY, 2,5-bis(fluoranyl)benzenesulfonamide, Carbonic anhydrase 2, ...
Authors:Gloeckner, S, Heine, A, Klebe, G.
Deposit date:2019-05-09
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:The Influence of Varying Fluorination Patterns on the Thermodynamics and Kinetics of Benzenesulfonamide Binding to Human Carbonic Anhydrase II.
Biomolecules, 10, 2020
6RON
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BU of 6ron by Molmil
Endothiapepsin in complex with compound 046
Descriptor: DIMETHYL SULFOXIDE, Endothiapepsin, GLYCEROL, ...
Authors:Magari, F, Heine, A, Klebe, G.
Deposit date:2019-05-13
Release date:2020-07-08
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Endothiapepsin in complex with compound 046
To Be Published
6SPM
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BU of 6spm by Molmil
Crystal structure of cAMP-dependent protein kinase A (CHO PKA) in complex with 4-(trifluoromethyl)benzoic acid
Descriptor: 4-(trifluoromethyl)benzoic acid, DIMETHYL SULFOXIDE, METHANOL, ...
Authors:Oebbeke, M, Siefker, C, Heine, A, Klebe, G.
Deposit date:2019-09-02
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Fragment Binding to Kinase Hinge: If Charge Distribution and Local pK a Shifts Mislead Popular Bioisosterism Concepts.
Angew.Chem.Int.Ed.Engl., 60, 2021
6SPU
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BU of 6spu by Molmil
Crystal structure of cAMP-dependent protein kinase A (CHO PKA) in complex with 3-aminobenzoic acid
Descriptor: 3-AMINOBENZOIC ACID, DIMETHYL SULFOXIDE, cAMP-dependent protein kinase catalytic subunit alpha
Authors:Oebbeke, M, Siefker, C, Heine, A, Klebe, G.
Deposit date:2019-09-02
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Fragment Binding to Kinase Hinge: If Charge Distribution and Local pK a Shifts Mislead Popular Bioisosterism Concepts.
Angew.Chem.Int.Ed.Engl., 60, 2021
6SQ1
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BU of 6sq1 by Molmil
Crystal structure of cAMP-dependent Protein Kinase A (CHO PKA) in complex with Aminofasudil
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 5-(1,4-diazepan-1-ylsulfonyl)isoquinolin-1-amine, DIMETHYL SULFOXIDE, ...
Authors:Oebbeke, M, Siefker, C, Heine, A, Klebe, G.
Deposit date:2019-09-03
Release date:2020-09-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:A crystallographic study of cAMP-dependent Protein Kinase A in complex with different Fasudil-derivatives
To Be Published
6T0P
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BU of 6t0p by Molmil
Cationic Trypsin in Complex with a D-Phe-Pro-2-aminopyridine derivative
Descriptor: (2~{S})-1-[(2~{R})-2-azanyl-3-phenyl-propanoyl]-~{N}-[(2-azanylpyridin-4-yl)methyl]pyrrolidine-2-carboxamide, CALCIUM ION, Cationic Trypsin, ...
Authors:Ngo, K, Heine, A, Klebe, G.
Deposit date:2019-10-03
Release date:2020-05-13
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Protein-Induced Change in Ligand Protonation during Trypsin and Thrombin Binding: Hint on Differences in Selectivity Determinants of Both Proteins?
J.Med.Chem., 63, 2020
6SY3
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BU of 6sy3 by Molmil
Cationic Trypsin in Complex with a D-DiPhe-Pro-pyridine derivative
Descriptor: (2~{S})-1-[(2~{R})-2-azanyl-3,3-diphenyl-propanoyl]-~{N}-(pyridin-4-ylmethyl)pyrrolidine-2-carboxamide, CALCIUM ION, Cationic Trypsin, ...
Authors:Ngo, K, Heine, A, Klebe, G.
Deposit date:2019-09-27
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Protein-Induced Change in Ligand Protonation during Trypsin and Thrombin Binding: Hint on Differences in Selectivity Determinants of Both Proteins?
J.Med.Chem., 63, 2020
6T0M
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BU of 6t0m by Molmil
Cationic Trypsin in Complex with a D-Phe-Pro-diaminopyridine derivative
Descriptor: (2~{S})-1-[(2~{R})-2-azanyl-3-phenyl-propanoyl]-~{N}-[[2,6-bis(azanyl)pyridin-4-yl]methyl]pyrrolidine-2-carboxamide, CALCIUM ION, Cationic trypsin, ...
Authors:Ngo, K, Heine, A, Klebe, G.
Deposit date:2019-10-03
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Protein-Induced Change in Ligand Protonation during Trypsin and Thrombin Binding: Hint on Differences in Selectivity Determinants of Both Proteins?
J.Med.Chem., 63, 2020
6QL0
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BU of 6ql0 by Molmil
Cationic Trypsin in Complex with a D-Phe-Pro-p-aminopyridine derivative
Descriptor: (2~{S})-1-[(2~{R})-2-azanyl-3-phenyl-propanoyl]-~{N}-[(6-azanylpyridin-3-yl)methyl]pyrrolidine-2-carboxamide, 1,2-ETHANEDIOL, CALCIUM ION, ...
Authors:Ngo, K, Heine, A, Klebe, G.
Deposit date:2019-01-31
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.634 Å)
Cite:Thrombin in Complex with a D-Phe-Pro-diaminopyridine derivative
To Be Published
6T3P
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BU of 6t3p by Molmil
Human Aldose Reductase Mutant L300A in Complex with a Ligand with an IDD Structure ({5-fluoro-2-[(3-nitrobenzyl)carbamoyl]phenoxy}acetic acid)
Descriptor: Aldo-keto reductase family 1 member B1, CITRIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Hubert, L.-S, Ley, M, Heine, A, Klebe, G.
Deposit date:2019-10-11
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Human Aldose Reductase Mutant L300A in Complex with a Ligand with an IDD Structure ({5-fluoro-2-[(3-nitrobenzyl)carbamoyl]phenoxy}acetic acid)
To Be Published
6T3Q
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BU of 6t3q by Molmil
Thrombin in Complex with a D-Phe-Pro-2-aminopyridine derivative
Descriptor: (2~{S})-1-[(2~{R})-2-azanyl-3-phenyl-propanoyl]-~{N}-[(2-azanylpyridin-4-yl)methyl]pyrrolidine-2-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Ngo, K, Collins, C, Heine, A, Klebe, G.
Deposit date:2019-10-11
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:Protein-Induced Change in Ligand Protonation during Trypsin and Thrombin Binding: Hint on Differences in Selectivity Determinants of Both Proteins?
J.Med.Chem., 63, 2020
6T7Q
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BU of 6t7q by Molmil
Human Aldose Reductase Mutant L301A in Complex with a Ligand with an IDD Structure (3-({[2-(carboxymethoxy)-4-fluorobenzoyl]amino}methyl)benzoic acid)
Descriptor: 3-({[2-(carboxymethoxy)-4-fluorobenzoyl]amino}methyl)benzoic acid, Aldo-keto reductase family 1 member B1, CITRIC ACID, ...
Authors:Hubert, L.-S, Ley, M, Heine, A, Klebe, G.
Deposit date:2019-10-23
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.01 Å)
Cite:Human Aldose Reductase Mutant L301A in Complex with a Ligand with an IDD Structure (3-({[2-(carboxymethoxy)-4-fluorobenzoyl]amino}methyl)benzoic acid)
To Be Published
4DXX
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BU of 4dxx by Molmil
TGT K52M mutant crystallized at pH 8.5
Descriptor: DIMETHYL SULFOXIDE, GLYCEROL, Queuine tRNA-ribosyltransferase, ...
Authors:Jakobi, S, Ritschel, T, Heine, A, Klebe, G.
Deposit date:2012-02-28
Release date:2013-03-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Hot-spot analysis to dissect the functional protein-protein interface of a tRNA-modifying enzyme.
Proteins, 82, 2014
1N2V
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BU of 1n2v by Molmil
Crystal Structure of TGT in complex with 2-Butyl-5,6-dihydro-1H-imidazo[4,5-d]pyridazine-4,7-dione
Descriptor: 2-BUTYL-5,6-DIHYDRO-1H-IMIDAZO[4,5-D]PYRIDAZINE-4,7-DIONE, Queuine tRNA-ribosyltransferase, ZINC ION
Authors:Brenk, R, Naerum, L, Graedler, U, Gerber, H.-D, Garcia, G.A, Reuter, K, Stubbs, M.T, Klebe, G.
Deposit date:2002-10-24
Release date:2003-04-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Virtual screening for submicromolar leads of tRNA-guanine transglycosylase based on a new unexpected binding mode detected by crystal structure analysis
J.Med.Chem., 46, 2003
6T7N
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BU of 6t7n by Molmil
Trypanosoma cruzi farnesyl diphosphate synthase in complex with IPP and Mn
Descriptor: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, Farnesyl diphosphate synthase, MANGANESE (II) ION
Authors:Magari, F, Heine, A, Klebe, G.
Deposit date:2019-10-22
Release date:2020-11-18
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Trypanosoma cruzi farnesyl diphosphate synthase in complex with IPP and Mn
To Be Published
3LQG
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BU of 3lqg by Molmil
Human aldose reductase mutant T113A complexed with IDD388
Descriptor: (2-{[(4-BROMO-2-FLUOROBENZYL)AMINO]CARBONYL}-5-CHLOROPHENOXY)ACETIC ACID, Aldose reductase, BROMIDE ION, ...
Authors:Koch, C, Heine, A, Klebe, G.
Deposit date:2010-02-09
Release date:2010-12-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Tracing the detail: how mutations affect binding modes and thermodynamic signatures of closely related aldose reductase inhibitors
J.Mol.Biol., 406, 2011

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数据于2024-10-16公开中

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