1Y7O
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![BU of 1y7o by Molmil](/molmil-images/mine/1y7o) | The structure of Streptococcus pneumoniae A153P ClpP | Descriptor: | ATP-dependent Clp protease proteolytic subunit, CALCIUM ION | Authors: | Kimber, M.S, Gribun, A, Ching, R, Sprangers, R, Fiebig, K.M, Houry, W.A. | Deposit date: | 2004-12-09 | Release date: | 2005-02-08 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (2.51 Å) | Cite: | The ClpP double ring tetradecameric protease exhibits plastic ring-ring interactions, and the N termini of its subunits form flexible loops that are essential for ClpXP and ClpAP complex formation. J.Biol.Chem., 280, 2005
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7D5V
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![BU of 7d5v by Molmil](/molmil-images/mine/7d5v) | Structure of the C646A mutant of peptidylarginine deiminase type III (PAD3) | Descriptor: | 1,2-ETHANEDIOL, GLYCEROL, Protein-arginine deiminase type-3 | Authors: | Akimoto, M, Mashimo, R, Unno, M. | Deposit date: | 2020-09-28 | Release date: | 2021-06-02 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.102 Å) | Cite: | Structures of human peptidylarginine deiminase type III provide insights into substrate recognition and inhibitor design. Arch.Biochem.Biophys., 708, 2021
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6OK1
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![BU of 6ok1 by Molmil](/molmil-images/mine/6ok1) | Ltp2-ChsH2(DUF35) aldolase | Descriptor: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ChsH2(DUF35), ... | Authors: | Kimber, M.S, Mallette, E, Aggett, R, Seah, S.Y.K. | Deposit date: | 2019-04-12 | Release date: | 2019-06-26 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | The steroid side-chain-cleaving aldolase Ltp2-ChsH2DUF35is a thiolase superfamily member with a radically repurposed active site. J.Biol.Chem., 294, 2019
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2MNG
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![BU of 2mng by Molmil](/molmil-images/mine/2mng) | Apo Structure of human HCN4 CNBD solved by NMR | Descriptor: | Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 | Authors: | Akimoto, M, Zhang, Z, Boulton, S, Selvaratnam, R, VanSchouwen, B, Gloyd, M, Accili, E.A, Lange, O.F, Melacini, G. | Deposit date: | 2014-04-03 | Release date: | 2014-06-04 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | A mechanism for the auto-inhibition of hyperpolarization-activated cyclic nucleotide-gated (HCN) channel opening and its relief by cAMP. J.Biol.Chem., 289, 2014
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3NOJ
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![BU of 3noj by Molmil](/molmil-images/mine/3noj) | The structure of HMG/CHA aldolase from the protocatechuate degradation pathway of Pseudomonas putida | Descriptor: | 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase, MAGNESIUM ION, PYRUVIC ACID, ... | Authors: | Kimber, M.S, Wang, W, Mazurkewich, S, Seah, S.Y.K. | Deposit date: | 2010-06-25 | Release date: | 2010-09-15 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (1.82 Å) | Cite: | Structural and Kinetic Characterization of 4-Hydroxy-4-methyl-2-oxoglutarate/4-Carboxy-4-hydroxy-2-oxoadipate Aldolase, a Protocatechuate Degradation Enzyme Evolutionarily Convergent with the HpaI and DmpG Pyruvate Aldolases. J.Biol.Chem., 285, 2010
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3P0K
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![BU of 3p0k by Molmil](/molmil-images/mine/3p0k) | Structure of Baculovirus Sulfhydryl Oxidase Ac92 | Descriptor: | ACETATE ION, FLAVIN-ADENINE DINUCLEOTIDE, IMIDAZOLE, ... | Authors: | Hakim, M, Fass, D. | Deposit date: | 2010-09-29 | Release date: | 2011-12-07 | Method: | X-RAY DIFFRACTION (1.47 Å) | Cite: | Structure of a baculovirus sulfhydryl oxidase, a highly divergent member of the erv flavoenzyme family. J.Virol., 85, 2011
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3GWL
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![BU of 3gwl by Molmil](/molmil-images/mine/3gwl) | |
3GWN
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3QZY
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![BU of 3qzy by Molmil](/molmil-images/mine/3qzy) | Structure of Baculovirus Sulfhydryl Oxidase Ac92 | Descriptor: | Baculovirus sulfhydryl oxidase Ac92, FLAVIN-ADENINE DINUCLEOTIDE, IMIDAZOLE, ... | Authors: | Hakim, M, Fass, D. | Deposit date: | 2011-03-07 | Release date: | 2012-02-15 | Last modified: | 2023-09-13 | Method: | X-RAY DIFFRACTION (2.14 Å) | Cite: | Structure of a baculovirus sulfhydryl oxidase, a highly divergent member of the erv flavoenzyme family. J.Virol., 85, 2011
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3TD7
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![BU of 3td7 by Molmil](/molmil-images/mine/3td7) | Crysal structure of the mimivirus sulfhydryl oxidase R596 | Descriptor: | FAD-linked sulfhydryl oxidase R596, FLAVIN-ADENINE DINUCLEOTIDE | Authors: | Hakim, M, Fass, D. | Deposit date: | 2011-08-10 | Release date: | 2012-09-05 | Last modified: | 2017-08-23 | Method: | X-RAY DIFFRACTION (2.21 Å) | Cite: | Exploring ORFan domains in giant viruses: structure of mimivirus sulfhydryl oxidase R596. Plos One, 7, 2012
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3CLJ
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![BU of 3clj by Molmil](/molmil-images/mine/3clj) | Structure of the RNA polymerase II CTD-interacting domain of Nrd1 | Descriptor: | GLYCEROL, Protein NRD1, SULFATE ION | Authors: | Vasiljeva, L, Kim, M, Mutschler, H, Buratowski, S, Meinhart, A. | Deposit date: | 2008-03-19 | Release date: | 2008-07-29 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | The Nrd1-Nab3-Sen1 termination complex interacts with the Ser5-phosphorylated RNA polymerase II C-terminal domain. Nat.Struct.Mol.Biol., 15, 2008
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2L0I
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![BU of 2l0i by Molmil](/molmil-images/mine/2l0i) | Solution structure of Rtt103 CTD-interacting domain bound to a Ser2 phosphorylated CTD peptide | Descriptor: | DNA-directed RNA polymerase, Regulator of Ty1 transposition protein 103 | Authors: | Lunde, B.M, Reichow, S.L, Kim, M, Suh, H, Leeper, T.C, Yang, F, Mutschler, H, Buratowski, S, Meinhart, A, Varani, G. | Deposit date: | 2010-07-06 | Release date: | 2010-09-08 | Last modified: | 2011-07-13 | Method: | SOLUTION NMR | Cite: | Cooperative interaction of transcription termination factors with the RNA polymerase II C-terminal domain. Nat.Struct.Mol.Biol., 17, 2010
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6KYV
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![BU of 6kyv by Molmil](/molmil-images/mine/6kyv) | Crystal Structure of RIG-I and hairpin RNA with G-U wobble base pairs | Descriptor: | Probable ATP-dependent RNA helicase DDX58, RNA (5'-R(*GP*GP*UP*AP*GP*AP*CP*GP*CP*UP*UP*CP*GP*GP*CP*GP*UP*UP*UP*GP*CP*C)-3'), ZINC ION | Authors: | Kim, K.-H, Hwang, J, Kim, J.H, Son, K.-P, Jang, Y, Kim, M, Kang, S.-J, Lee, J.-O, Choi, B.-S. | Deposit date: | 2019-09-20 | Release date: | 2020-09-23 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | Structural and biophysical properties of RIG-I bound to dsRNA with G-U wobble base pairs. Rna Biol., 17, 2020
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6L0Y
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![BU of 6l0y by Molmil](/molmil-images/mine/6l0y) | Structure of dsRNA with G-U wobble base pairs | Descriptor: | RNA (5'-R(*GP*GP*UP*AP*GP*AP*CP*GP*CP*UP*UP*CP*GP*GP*CP*GP*UP*UP*UP*GP*CP*C)-3') | Authors: | Kim, K.-H, Hwang, J, Kim, J.H, Son, K.-P, Jang, Y, Kim, M, Kang, S.-J, Lee, J.-O, Choi, B.-S. | Deposit date: | 2019-09-27 | Release date: | 2020-09-30 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | Structure of dsRNA with G-U wobble base pairs To Be Published
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9IKC
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![BU of 9ikc by Molmil](/molmil-images/mine/9ikc) | Orf virus scaffolding protein Orfv075 | Descriptor: | 62 kDa protein | Authors: | Hyun, J, Kim, S, Ko, S, Kim, M, Jang, Y. | Deposit date: | 2024-06-27 | Release date: | 2024-08-07 | Method: | ELECTRON MICROSCOPY (1.9 Å) | Cite: | Cryo-EM structure of orf virus scaffolding protein orfv075. Biochem.Biophys.Res.Commun., 728, 2024
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7CQ0
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![BU of 7cq0 by Molmil](/molmil-images/mine/7cq0) | Crystal structure of Streptoavidin-C1 from Streptomyces cinamonensis | Descriptor: | Mature Streptoavidin-C1 | Authors: | Jeon, B.J, Kim, S, Lee, J.-H, Kim, M.S, Hwang, K.Y. | Deposit date: | 2020-08-08 | Release date: | 2021-07-14 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.03 Å) | Cite: | Insights into the structure of mature streptavidin C1 from Streptomyces cinnamonensis reveal the self-binding of the extension C-terminal peptide to biotin-binding sites. Iucrj, 8, 2021
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7CPZ
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![BU of 7cpz by Molmil](/molmil-images/mine/7cpz) | Crystal structure of Streptoavidin-C1 from Streptomyces cinamonensis | Descriptor: | BIOTIN, Mature Streptoavidin-C1 | Authors: | Jeon, B.J, Kim, S, Lee, J.-H, Kim, M.S, Hwang, K.Y. | Deposit date: | 2020-08-08 | Release date: | 2021-07-14 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Insights into the structure of mature streptavidin C1 from Streptomyces cinnamonensis reveal the self-binding of the extension C-terminal peptide to biotin-binding sites. Iucrj, 8, 2021
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1SIX
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![BU of 1six by Molmil](/molmil-images/mine/1six) | Mycobacterium tuberculosis dUTPase complexed with magnesium and alpha,beta-imido-dUTP | Descriptor: | 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Deoxyuridine 5'-triphosphate nucleotidohydrolase, ... | Authors: | Sawaya, M.R, Chan, S, Segelke, B, Lekin, T, Krupka, H, Cho, U.-S, Kim, M, So, M, Kim, C.-Y, Naranjo, C.M, Rogers, Y.C, Park, M.S, Waldo, G.S, Pashkov, I, Cascio, D, Yeates, T.O, Perry, J.L, Terwilliger, T.C, Eisenberg, D, TB Structural Genomics Consortium (TBSGC) | Deposit date: | 2004-03-01 | Release date: | 2004-03-09 | Last modified: | 2023-08-23 | Method: | X-RAY DIFFRACTION (1.3 Å) | Cite: | Crystal structure of the Mycobacterium tuberculosis dUTPase: insights into the catalytic mechanism. J.Mol.Biol., 341, 2004
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5JXD
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![BU of 5jxd by Molmil](/molmil-images/mine/5jxd) | Crystal structure of murine Tnfaip8 C165S mutant | Descriptor: | Tumor necrosis factor alpha-induced protein 8, [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate | Authors: | Park, J, Kim, M.S, Lee, D, Shin, D.H. | Deposit date: | 2016-05-13 | Release date: | 2017-06-28 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.029 Å) | Cite: | The Tnfaip8-PE complex is a novel upstream effector in the anti-autophagic action of insulin Sci Rep, 7, 2017
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8YA8
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7XLJ
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![BU of 7xlj by Molmil](/molmil-images/mine/7xlj) | The crystal structure of ORE1(ANAC092) NAC domain | Descriptor: | NAC domain-containing protein 92 | Authors: | Chun, I.S, Kim, M.S. | Deposit date: | 2022-04-21 | Release date: | 2023-03-29 | Last modified: | 2023-09-06 | Method: | X-RAY DIFFRACTION (2.45 Å) | Cite: | Structural basis of DNA binding by the NAC transcription factor ORE1, a master regulator of plant senescence. Plant Commun., 4, 2023
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7XP3
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![BU of 7xp3 by Molmil](/molmil-images/mine/7xp3) | DNA complex form of ORESARA1(ANAC092) NAC Domain | Descriptor: | DNA (5'-D(*AP*GP*TP*TP*AP*CP*GP*TP*AP*CP*GP*GP*CP*AP*CP*AP*CP*GP*TP*AP*AP*C)-3'), DNA (5'-D(*TP*GP*TP*TP*AP*CP*GP*TP*GP*TP*GP*CP*CP*GP*TP*AP*CP*GP*TP*AP*AP*C)-3'), DNA (5'-D(P*CP*AP*CP*AP*CP*GP*TP*AP*AP*C)-3'), ... | Authors: | Chun, I.S, Kim, M.S. | Deposit date: | 2022-05-03 | Release date: | 2023-03-29 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (3.25 Å) | Cite: | Structural basis of DNA binding by the NAC transcription factor ORE1, a master regulator of plant senescence. Plant Commun., 4, 2023
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6SDF
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![BU of 6sdf by Molmil](/molmil-images/mine/6sdf) | N-terminal SH3 domain of Grb2 protein | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Growth factor receptor-bound protein 2 | Authors: | Bolgov, A.A, Korban, S.A, Luzik, D.A, Rogacheva, O.N, Zhemkov, V.A, Kim, M, Skrynnikov, N.R, Bezprozvanny, I.B. | Deposit date: | 2019-07-26 | Release date: | 2020-01-29 | Last modified: | 2024-01-24 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Crystal structure of the SH3 domain of growth factor receptor-bound protein 2. Acta Crystallogr.,Sect.F, 76, 2020
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6CIL
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![BU of 6cil by Molmil](/molmil-images/mine/6cil) | PRE-REACTION COMPLEX, RAG1(E962Q)/2-INTACT/INTACT 12/23RSS COMPLEX IN MN2+ | Descriptor: | High mobility group protein B1, Intact 12RSS substrate forward strand, Intact 12RSS substrate reverse strand, ... | Authors: | Chuenchor, W, Chen, X, Kim, M.S, Gellert, M, Yang, W. | Deposit date: | 2018-02-24 | Release date: | 2018-04-25 | Last modified: | 2023-10-04 | Method: | X-RAY DIFFRACTION (4.15 Å) | Cite: | Cracking the DNA Code for V(D)J Recombination. Mol. Cell, 70, 2018
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6CIK
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![BU of 6cik by Molmil](/molmil-images/mine/6cik) | Pre-Reaction Complex, RAG1(E962Q)/2-intact/nicked 12/23RSS complex in Mn2+ | Descriptor: | DNA (5'-D(*AP*TP*CP*TP*GP*GP*CP*CP*TP*GP*TP*CP*TP*TP*A)-3'), High mobility group protein B1, Intact 12RSS substrate forward strand, ... | Authors: | Chuenchor, W, Chen, X, Kim, M.S, Gellert, M, Yang, W. | Deposit date: | 2018-02-24 | Release date: | 2018-04-25 | Last modified: | 2023-10-04 | Method: | X-RAY DIFFRACTION (3.15 Å) | Cite: | Cracking the DNA Code for V(D)J Recombination. Mol. Cell, 70, 2018
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