5NKL
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![BU of 5nkl by Molmil](/molmil-images/mine/5nkl) | Crystal structure of the large fragment of DNA polymerase I from Thermus Aquaticus in a closed ternary complex with the artificial base pair dDs-dPxTP | Descriptor: | ACETATE ION, DNA (5'-D(*AP*AP*AP*(DNU)P*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3'), DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(DOC))-3'), ... | Authors: | Betz, K, Marx, A, Diederichs, K, Hirao, I, Kimoto, M. | Deposit date: | 2017-03-31 | Release date: | 2017-06-28 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Structural Basis for Expansion of the Genetic Alphabet with an Artificial Nucleobase Pair. Angew. Chem. Int. Ed. Engl., 56, 2017
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7D5R
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![BU of 7d5r by Molmil](/molmil-images/mine/7d5r) | Structure of the Ca2+-bound C646A mutant of peptidylarginine deiminase type III (PAD3) | Descriptor: | CALCIUM ION, CHLORIDE ION, GLYCEROL, ... | Authors: | Mashimo, R, Akimoto, M, Unno, M. | Deposit date: | 2020-09-28 | Release date: | 2021-06-02 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (3.148 Å) | Cite: | Structures of human peptidylarginine deiminase type III provide insights into substrate recognition and inhibitor design. Arch.Biochem.Biophys., 708, 2021
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7CG3
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![BU of 7cg3 by Molmil](/molmil-images/mine/7cg3) | Staggered ring conformation of CtHsp104 (Hsp104 from Chaetomium Thermophilum) | Descriptor: | Heat shock protein 104 | Authors: | Inoue, Y, Hanazono, Y, Noi, K, Kawamoto, A, Kimatsuka, M, Harada, R, Takeda, K, Iwamasa, N, Shibata, K, Noguchi, K, Shigeta, Y, Namba, K, Ogura, T, Miki, K, Shinohara, K, Yohda, M. | Deposit date: | 2020-06-30 | Release date: | 2021-04-28 | Last modified: | 2024-05-29 | Method: | ELECTRON MICROSCOPY (5.1 Å) | Cite: | Split conformation of Chaetomium thermophilum Hsp104 disaggregase. Structure, 29, 2021
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3VSM
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![BU of 3vsm by Molmil](/molmil-images/mine/3vsm) | The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein | Descriptor: | GLYCEROL, Occlusion-derived virus envelope protein E66 | Authors: | Kawaguchi, Y, Sugiura, N, Kimata, K, Kimura, M, Kakuta, Y. | Deposit date: | 2012-04-27 | Release date: | 2013-05-22 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein To be Published
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3VSN
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![BU of 3vsn by Molmil](/molmil-images/mine/3vsn) | The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein | Descriptor: | GLYCEROL, IODIDE ION, Occlusion-derived virus envelope protein E66 | Authors: | Kawaguchi, Y, Sugiura, N, Kimata, K, Kimura, M, Kakuta, Y. | Deposit date: | 2012-04-27 | Release date: | 2013-05-22 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | The crystal structure of novel chondroition lyase ODV-E66, baculovirus envelope protein To be Published
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1ET7
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![BU of 1et7 by Molmil](/molmil-images/mine/1et7) | CRYSTAL STRUCTURE OF NITRITE REDUCTASE HIS255ASP MUTANT FROM ALCALIGENES FAECALIS S-6 | Descriptor: | CADMIUM ION, COPPER (II) ION, NITRITE REDUCTASE | Authors: | Boulanger, M.J, Kukimoto, M, Nishiyama, M, Horinouchi, S, Murphy, M.E.P. | Deposit date: | 2000-04-12 | Release date: | 2000-08-24 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Catalytic roles for two water bridged residues (Asp-98 and His-255) in the active site of copper-containing nitrite reductase. J.Biol.Chem., 275, 2000
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1ET8
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![BU of 1et8 by Molmil](/molmil-images/mine/1et8) | CRYSTAL STRUCTURE OF NITRITE REDUCTASE HIS255ASN MUTANT FROM ALCALIGENES FAECALIS | Descriptor: | COPPER (II) ION, NITRITE REDUCTASE, ZINC ION | Authors: | Boulanger, M.J, Kukimoto, M, Nishiyama, M, Horinouchi, S, Murphy, M.E.P. | Deposit date: | 2000-04-12 | Release date: | 2000-08-24 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Catalytic roles for two water bridged residues (Asp-98 and His-255) in the active site of copper-containing nitrite reductase. J.Biol.Chem., 275, 2000
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1ET5
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![BU of 1et5 by Molmil](/molmil-images/mine/1et5) | CRYSTAL STRUCTURE OF NITRITE REDUCTASE ASP98ASN MUTANT FROM ALCALIGENES FAECALIS S-6 | Descriptor: | COPPER (II) ION, NITRITE REDUCTASE, ZINC ION | Authors: | Boulanger, M.J, Kukimoto, M, Nishiyama, M, Horinouchi, S, Murphy, M.E.P. | Deposit date: | 2000-04-12 | Release date: | 2000-08-24 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Catalytic roles for two water bridged residues (Asp-98 and His-255) in the active site of copper-containing nitrite reductase. J.Biol.Chem., 275, 2000
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5H12
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![BU of 5h12 by Molmil](/molmil-images/mine/5h12) | |
1WN5
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![BU of 1wn5 by Molmil](/molmil-images/mine/1wn5) | Crystal Structure of Blasticidin S Deaminase (BSD) Complexed with Cacodylic Acid | Descriptor: | Blasticidin-S deaminase, CACODYLATE ION, ZINC ION | Authors: | Kumasaka, T, Yamamoto, M, Furuichi, M, Nakasako, M, Kimura, M, Yamaguchi, I, Ueki, T. | Deposit date: | 2004-07-27 | Release date: | 2005-10-25 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Crystal structures of blasticidin S deaminase (BSD): implications for dynamic properties of catalytic zinc J.Biol.Chem., 282, 2007
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2Z3I
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![BU of 2z3i by Molmil](/molmil-images/mine/2z3i) | Crystal structure of blasticidin S deaminase (BSD) mutant E56Q complexed with substrate | Descriptor: | BLASTICIDIN S, Blasticidin-S deaminase, CACODYLATE ION, ... | Authors: | Kumasaka, T, Yamamoto, M, Furuichi, M, Nakasako, M, Kimura, M, Yamaguchi, I, Ueki, T. | Deposit date: | 2007-06-04 | Release date: | 2007-10-23 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Crystal structures of blasticidin S deaminase (BSD): implications for dynamic properties of catalytic zinc J.Biol.Chem., 282, 2007
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2Z87
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![BU of 2z87 by Molmil](/molmil-images/mine/2z87) | Crystal structure of chondroitin polymerase from Escherichia coli strain K4 (K4CP) complexed with UDP-GalNAc and UDP | Descriptor: | Chondroitin synthase, MANGANESE (II) ION, URIDINE-5'-DIPHOSPHATE, ... | Authors: | Osawa, T, Sugiura, N, Shimada, H, Hirooka, R, Tsuji, A, Kimura, M, Kimata, K, Kakuta, Y. | Deposit date: | 2007-09-03 | Release date: | 2008-09-16 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | Crystal structure of chondroitin polymerase from Escherichia coli K4. Biochem. Biophys. Res. Commun., 378, 2009
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2Z3H
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![BU of 2z3h by Molmil](/molmil-images/mine/2z3h) | Crystal structure of blasticidin S deaminase (BSD) complexed with deaminohydroxy blasticidin S | Descriptor: | 1-(4-{[(3R)-3-AMINO-5-{[(Z)-AMINO(IMINO)METHYL](METHYL)AMINO}PENTANOYL]AMINO}-2,3,4-TRIDEOXY-D-ERYTHRO-HEX-2-ENOPYRANURONOSYL)-4-HYDROXYPYRIMIDIN-2(1H)-ONE, Blasticidin-S deaminase, ZINC ION | Authors: | Kumasaka, T, Yamamoto, M, Furuichi, M, Nakasako, M, Kimura, M, Yamaguchi, I, Ueki, T. | Deposit date: | 2007-06-04 | Release date: | 2007-10-23 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Crystal structures of blasticidin S deaminase (BSD): implications for dynamic properties of catalytic zinc J.Biol.Chem., 282, 2007
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1WN6
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![BU of 1wn6 by Molmil](/molmil-images/mine/1wn6) | Crystal Structure of Blasticidin S Deaminase (BSD) Complexed with Tetrahedral Intermediate of Blasticidin S | Descriptor: | 6-(4-AMINO-4-HYDROXY-2-OXO-3,4-DIHYDRO-2H-PYRIMIDIN-1-YL)-3-[3-AMINO-5-(N-METHYL-GUANIDINO)-PENT ANOYLAMINO]-3,6-DIHYDRO-2H-PYRAN-2-CARBOXYLIC ACID, ARSENIC, Blasticidin-S deaminase, ... | Authors: | Kumasaka, T, Yamamoto, M, Furuichi, M, Nakasako, M, Kimura, M, Yamaguchi, I, Ueki, T. | Deposit date: | 2004-07-27 | Release date: | 2005-10-25 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Crystal structures of blasticidin S deaminase (BSD): implications for dynamic properties of catalytic zinc J.Biol.Chem., 282, 2007
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1V9H
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![BU of 1v9h by Molmil](/molmil-images/mine/1v9h) | Crystal structure of the RNase MC1 mutant Y101A in complex with 5'-UMP | Descriptor: | Ribonuclease MC, SULFATE ION, URIDINE-5'-MONOPHOSPHATE | Authors: | Kimura, K, Numata, T, Kakuta, Y, Kimura, M. | Deposit date: | 2004-01-26 | Release date: | 2004-10-05 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Amino acids conserved at the C-terminal half of the ribonuclease t2 family contribute to protein stability of the enzymes Biosci.Biotechnol.Biochem., 68, 2004
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3AP1
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![BU of 3ap1 by Molmil](/molmil-images/mine/3ap1) | Crystal structure of human tyrosylprotein sulfotransferase-2 complexed with PAP and C4 peptide | Descriptor: | ADENOSINE-3'-5'-DIPHOSPHATE, C4 peptide, GLYCEROL, ... | Authors: | Teramoto, T, Fujikawa, Y, Kawaguchi, Y, Kurogi, K, Soejima, M, Adachi, R, Nakanishi, Y, Mishiro-Sato, E, Liu, M.-C, Sakakibara, Y, Suiko, M, Kimura, M, Kakuta, Y. | Deposit date: | 2010-10-09 | Release date: | 2011-10-26 | Last modified: | 2013-03-27 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Crystal structure of human tyrosylprotein sulfotransferase-2 reveals the mechanism of protein tyrosine sulfation reaction. Nat Commun, 4, 2013
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2Z3J
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![BU of 2z3j by Molmil](/molmil-images/mine/2z3j) | Crystal structure of blasticidin S deaminase (BSD) R90K mutant | Descriptor: | Blasticidin-S deaminase, CACODYLATE ION, CHLORIDE ION, ... | Authors: | Teh, A.H, Kumasaka, T, Yamamoto, M, Furuichi, M, Nakasako, M, Kimura, M, Yamaguchi, I, Ueki, T. | Deposit date: | 2007-06-04 | Release date: | 2007-10-23 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Crystal structures of blasticidin S deaminase (BSD): implications for dynamic properties of catalytic zinc J.Biol.Chem., 282, 2007
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2Z86
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![BU of 2z86 by Molmil](/molmil-images/mine/2z86) | Crystal structure of chondroitin polymerase from Escherichia coli strain K4 (K4CP) complexed with UDP-GlcUA and UDP | Descriptor: | Chondroitin synthase, MANGANESE (II) ION, URIDINE-5'-DIPHOSPHATE, ... | Authors: | Osawa, T, Sugiura, N, Shimada, H, Hirooka, R, Tsuji, A, Kimura, M, Kimata, K, Kakuta, Y. | Deposit date: | 2007-09-03 | Release date: | 2008-09-16 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Crystal structure of chondroitin polymerase from Escherichia coli K4. Biochem. Biophys. Res. Commun., 378, 2009
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3AP2
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![BU of 3ap2 by Molmil](/molmil-images/mine/3ap2) | Crystal structure of human tyrosylprotein sulfotransferase-2 complexed with PAP,C4 peptide, and phosphate ion | Descriptor: | ADENOSINE-3'-5'-DIPHOSPHATE, C4 peptide, GLYCEROL, ... | Authors: | Teramoto, T, Fujikawa, Y, Kawaguchi, Y, Kurogi, K, Soejima, M, Adachi, R, Nakanishi, Y, Mishiro-Sato, E, Liu, M.-C, Sakakibara, Y, Suiko, M, Kimura, M, Kakuta, Y. | Deposit date: | 2010-10-09 | Release date: | 2011-10-26 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Crystal structure of human tyrosylprotein sulfotransferase-2: Insights into substrate-binding and catalysis of post-translational protein tyrosine sulfation To be Published
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2Z3G
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![BU of 2z3g by Molmil](/molmil-images/mine/2z3g) | Crystal structure of blasticidin S deaminase (BSD) | Descriptor: | Blasticidin-S deaminase, ZINC ION, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose | Authors: | Kumasaka, T, Yamamoto, M, Furuichi, M, Nakasako, M, Kimura, M, Yamaguchi, I, Ueki, T. | Deposit date: | 2007-06-04 | Release date: | 2007-10-23 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.5 Å) | Cite: | Crystal structures of blasticidin S deaminase (BSD): implications for dynamic properties of catalytic zinc J.Biol.Chem., 282, 2007
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1J3A
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![BU of 1j3a by Molmil](/molmil-images/mine/1j3a) | Crystal structure of ribosomal protein L13 from Pyrococcus horikoshii | Descriptor: | 50S ribosomal protein L13P | Authors: | Nakashima, T, Tanaka, M, Kazama, T, Kawamura, S, Kimura, M, Yao, M, Tanaka, I. | Deposit date: | 2003-01-21 | Release date: | 2003-02-04 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Crystal structure of ribosomal protein L13 from hyperthermophilic archaeon Pyrococcus horikoshii To be Published
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3AP3
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![BU of 3ap3 by Molmil](/molmil-images/mine/3ap3) | Crystal structure of human tyrosylprotein sulfotransferase-2 complexed with PAP | Descriptor: | ADENOSINE-3'-5'-DIPHOSPHATE, Protein-tyrosine sulfotransferase 2 | Authors: | Teramoto, T, Fujikawa, Y, Kawaguchi, Y, Kurogi, K, Soejima, M, Adachi, R, Nakanishi, Y, Mishiro-Sato, E, Liu, M.-C, Sakakibara, Y, Suiko, M, Kimura, M, Kakuta, Y. | Deposit date: | 2010-10-09 | Release date: | 2011-10-26 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (3.5 Å) | Cite: | Crystal structure of human tyrosylprotein sulfotransferase-2 reveals the mechanism of protein tyrosine sulfation reaction. Nat Commun, 4, 2013
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1WWH
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![BU of 1wwh by Molmil](/molmil-images/mine/1wwh) | Crystal structure of the MPPN domain of mouse Nup35 | Descriptor: | nucleoporin 35 | Authors: | Handa, N, Murayama, K, Kukimoto, M, Hamana, H, Uchikubo, T, Takemoto, C, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2005-01-05 | Release date: | 2005-07-05 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | The crystal structure of mouse Nup35 reveals atypical RNP motifs and novel homodimerization of the RRM domain J.Mol.Biol., 363, 2006
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2ZWI
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![BU of 2zwi by Molmil](/molmil-images/mine/2zwi) | Crystal structure of alpha/beta-Galactoside alpha-2,3-Sialyltransferase from a Luminous Marine Bacterium, Photobacterium phosphoreum | Descriptor: | Alpha-/beta-galactoside alpha-2,3-sialyltransferase, CHLORIDE ION, CYTIDINE-5'-MONOPHOSPHATE, ... | Authors: | Iwatani, T, Okino, N, Sakakura, M, Kajiwara, H, Ichikawa, M, Takakura, Y, Kimura, M, Ito, M, Yamamoto, T, Kakuta, Y. | Deposit date: | 2008-12-05 | Release date: | 2009-06-09 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (2.01 Å) | Cite: | Crystal structure of alpha/beta-galactoside alpha2,3-sialyltransferase from a luminous marine bacterium, Photobacterium phosphoreum Febs Lett., 583, 2009
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2ZYT
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![BU of 2zyt by Molmil](/molmil-images/mine/2zyt) | Crystal structure of mouse cytosolic sulfotransferase mSULT1D1 complex with PAPS | Descriptor: | 3'-PHOSPHATE-ADENOSINE-5'-PHOSPHATE SULFATE, GLYCEROL, Tyrosine-ester sulfotransferase | Authors: | Teramoto, T, Sakakibara, Y, Liu, M.-C, Suiko, M, Kimura, M, Kakuta, Y. | Deposit date: | 2009-01-29 | Release date: | 2009-04-21 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.55 Å) | Cite: | Snapshot of a Michaelis complex in a sulfuryl transfer reaction: Crystal structure of a mouse sulfotransferase, mSULT1D1, complexed with donor substrate and accepter substrate Biochem.Biophys.Res.Commun., 383, 2009
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