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PDB: 230 results

4PZD
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BU of 4pzd by Molmil
Crystal structure of (S)-3-hydroxybutyryl-CoA dehydrogenase PaaH1 in complex with NAD+
Descriptor: 3-Hydroxyacyl-CoA dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Kim, J, Chang, J.H, Kim, K.J.
Deposit date:2014-03-29
Release date:2015-02-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Crystal structure and biochemical properties of the (S)-3-hydroxybutyryl-CoA dehydrogenase PaaH1 from Ralstonia eutropha
Biochem.Biophys.Res.Commun., 448, 2014
2NBP
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BU of 2nbp by Molmil
Solution structure of the T119M variant of transthyretin in its monomeric state
Descriptor: Transthyretin
Authors:Kim, J, Oroz, J, Zweckstetter, M.
Deposit date:2016-03-09
Release date:2017-05-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of Monomeric Transthyretin Carrying the Clinically Important T119M Mutation.
Angew. Chem. Int. Ed. Engl., 55, 2016
2NBO
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BU of 2nbo by Molmil
Solution structure of the F87M/L110M variant of transthyretin in the monomeric state
Descriptor: Transthyretin
Authors:Kim, J, Oroz, J, Zweckstetter, M.
Deposit date:2016-03-09
Release date:2017-02-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Mechanistic basis for the recognition of a misfolded protein by the molecular chaperone Hsp90.
Nat. Struct. Mol. Biol., 24, 2017
5ZIQ
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BU of 5ziq by Molmil
Crystal structure of hexacoordinated heme protein from anhydrobiotic tardigrade at pH 4
Descriptor: 1,2-ETHANEDIOL, Globin protein, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Kim, J, Fukuda, Y, Inoue, T.
Deposit date:2018-03-16
Release date:2019-01-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of Kumaglobin: a hexacoordinated heme protein from an anhydrobiotic tardigrade, Ramazzottius varieornatus.
FEBS J., 286, 2019
5ZM9
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BU of 5zm9 by Molmil
Crystal structure of hexacoordinated heme protein from anhydrobiotic tardigrade at pH 7
Descriptor: CHLORIDE ION, Globin Protein, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kim, J, Fukuda, Y, Inoue, T.
Deposit date:2018-04-02
Release date:2019-01-02
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of Kumaglobin: a hexacoordinated heme protein from an anhydrobiotic tardigrade, Ramazzottius varieornatus.
FEBS J., 286, 2019
6JCM
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BU of 6jcm by Molmil
Crystal structure of ligand-free Rv0187.
Descriptor: ACETATE ION, Probable O-methyltransferase
Authors:Kim, J, Lee, S.
Deposit date:2019-01-29
Release date:2019-12-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structural and biochemical characterization of Rv0187, an O-methyltransferase from Mycobacterium tuberculosis.
Sci Rep, 9, 2019
6JCL
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BU of 6jcl by Molmil
Crystal structure of cofactor-bound Rv0187 from MTB
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Probable O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Kim, J, Lee, S.
Deposit date:2019-01-29
Release date:2019-12-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.644 Å)
Cite:Structural and biochemical characterization of Rv0187, an O-methyltransferase from Mycobacterium tuberculosis.
Sci Rep, 9, 2019
1ZB1
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BU of 1zb1 by Molmil
Structure basis for endosomal targeting by the Bro1 domain
Descriptor: BRO1 protein
Authors:Kim, J, Sitaraman, S, Hierro, A, Beach, B.M, Odorizzi, G, Hurley, J.H.
Deposit date:2005-04-07
Release date:2005-06-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for endosomal targeting by the Bro1 domain.
Dev.Cell, 8, 2005
4O92
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BU of 4o92 by Molmil
Crystal structure of a Glutathione S-transferase from Pichia kudriavzevii (Issatchenkia orientalis), target EFI-501747
Descriptor: Glutathione S-transferase, SULFATE ION
Authors:Kim, J, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Washington, E, Glenn, A.S, Chowdhury, S, Evans, B, Stead, M, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Attonito, J.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-12-31
Release date:2014-01-15
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Crystal structure of a Glutathione S-transferase from Pichia kudriavzevii (Issatchenkia orientalis), target EFI-501747
TO BE PUBLISHED
4O7H
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BU of 4o7h by Molmil
Crystal structure of a glutathione S-transferase from Rhodospirillum rubrum F11, Target EFI-507460
Descriptor: Glutathione S-transferase
Authors:Kim, J, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Stead, M, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Attonito, J.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-12-24
Release date:2014-01-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of a glutathione S-transferase from Rhodospirillum rubrum F11, Target EFI-507460
TO BE PUBLISHED
4PTS
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BU of 4pts by Molmil
Crystal structure of a glutathione transferase from Gordonia bronchialis DSM 43247, target EFI-507405
Descriptor: glutathione S-transferase
Authors:Kim, J, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-03-11
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Crystal structure of a glutathione transferase from Gordonia bronchialis DSM 43247, target EFI-507405
To be Published
7EQ5
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BU of 7eq5 by Molmil
Plant growth-promoting factor YxaL mutant from Bacillus velezensis - T175W/W215G
Descriptor: Membrane associated protein kinase with beta-propeller domain, pyrrolo-quinoline quinone beta-propeller repeat
Authors:Kim, J, Ha, N.-C.
Deposit date:2021-04-30
Release date:2022-01-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the plant growth-promoting factor YxaL from the rhizobacterium Bacillus velezensis and its application to protein engineering.
Acta Crystallogr D Struct Biol, 78, 2022
7EVF
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BU of 7evf by Molmil
Plant growth-promoting factor YxaL mutant from Bacillus velezensis - T175W/S213G/W215A
Descriptor: PQQ_3 domain-containing protein
Authors:Kim, J, Ha, N.-C.
Deposit date:2021-05-21
Release date:2022-01-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of the plant growth-promoting factor YxaL from the rhizobacterium Bacillus velezensis and its application to protein engineering.
Acta Crystallogr D Struct Biol, 78, 2022
4PUA
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BU of 4pua by Molmil
Crystal Structure Of glutathione transferase YghU from Streptococcus pneumoniae ATCC 700669, complexed with glutathione, Target EFI-507284
Descriptor: GLUTATHIONE, glutathione S-transferase
Authors:Kim, J, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Stead, M, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-03-12
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.708 Å)
Cite:Crystal Structure Of glutathione transferase YghU from Streptococcus pneumoniae ATCC 700669, complexed with glutathione, Target EFI-507284
To be Published
4QNX
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BU of 4qnx by Molmil
Crystal structure of apo-CmoB
Descriptor: SULFATE ION, tRNA (mo5U34)-methyltransferase
Authors:Kim, J, Toro, R, Bhosle, R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-06-18
Release date:2014-09-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.619 Å)
Cite:Determinants of the CmoB carboxymethyl transferase utilized for selective tRNA wobble modification.
Nucleic Acids Res., 43, 2015
4QNU
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BU of 4qnu by Molmil
Crystal structure of CmoB bound with Cx-SAM in P21212
Descriptor: (2S)-4-[{[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}(carboxylatomethyl)sulfonio] -2-ammoniobutanoate, PHOSPHATE ION, tRNA (mo5U34)-methyltransferase
Authors:Kim, J, Toro, R, Bhosle, R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-06-18
Release date:2014-09-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Determinants of the CmoB carboxymethyl transferase utilized for selective tRNA wobble modification.
Nucleic Acids Res., 43, 2015
4QNV
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BU of 4qnv by Molmil
Crystal structure of Cx-SAM bound CmoB from E. coli in P6122
Descriptor: (2S)-4-[{[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}(carboxylatomethyl)sulfonio] -2-ammoniobutanoate, PHOSPHATE ION, tRNA (mo5U34)-methyltransferase
Authors:Kim, J, Toro, R, Bhosle, R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2014-06-18
Release date:2014-09-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Determinants of the CmoB carboxymethyl transferase utilized for selective tRNA wobble modification.
Nucleic Acids Res., 43, 2015
7E3R
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BU of 7e3r by Molmil
Crystal structure of TrmL from Vibrio vulnificus
Descriptor: tRNA (cytidine(34)-2'-O)-methyltransferase
Authors:Kim, J, Son, J.
Deposit date:2021-02-09
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Crystal structure of tRNA mehtyltransferase TrmL from Vibrio vulnificus
To be published
7E3Q
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BU of 7e3q by Molmil
Crystal structure of SAH bound TrmL from Vibrio vulnificus
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, tRNA (cytidine(34)-2'-O)-methyltransferase
Authors:Kim, J, Son, J.
Deposit date:2021-02-09
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of SAH bound TrmL from Vibrio vulnificus
To Be Published
7E3T
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BU of 7e3t by Molmil
Crystal structure of TrmL from Mycoplasma capricolum
Descriptor: Putative tRNA (cytidine(34)-2'-O)-methyltransferase
Authors:Kim, J, Son, J.
Deposit date:2021-02-09
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of TrmL from Mycoplasma capricolum
To Be Published
7E3S
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BU of 7e3s by Molmil
Crystal structure of TrmL from Shewanella oneidensis
Descriptor: tRNA (cytidine(34)-2'-O)-methyltransferase
Authors:Kim, J, Son, J.
Deposit date:2021-02-09
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of TrmL from Shewanella oneidensis
To be Published
4KDZ
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BU of 4kdz by Molmil
Crystal structure of tRNA/rRNA methyltransferase YibK from Escherichia coli (Target NYSGRC-012599)
Descriptor: tRNA (cytidine(34)-2'-O)-methyltransferase
Authors:Kim, J, Toro, R, Bhosle, R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-04-25
Release date:2013-08-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Crystal structure of tRNA/rRNA methyltransferase YibK from Escherichia coli (Target NYSGRC-012599)
To be Published
3CS2
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BU of 3cs2 by Molmil
Crystal structure of PTE G60A mutant
Descriptor: CACODYLATE ION, COBALT (II) ION, Parathion hydrolase
Authors:Kim, J, Almo, S.C.
Deposit date:2008-04-08
Release date:2009-02-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of diethyl phosphate bound to the binuclear metal center of phosphotriesterase.
Biochemistry, 47, 2008
1PZZ
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BU of 1pzz by Molmil
Crystal structure of FGF-1, V51N mutant
Descriptor: FORMIC ACID, Heparin-binding growth factor 1, SULFATE ION
Authors:Kim, J, Blaber, M.
Deposit date:2003-07-14
Release date:2004-07-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Sequence swapping does not result in conformation swapping for the beta4/beta5 and beta8/beta9 beta-hairpin turns in human acidic fibroblast growth factor
Protein Sci., 14, 2005
1Q04
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BU of 1q04 by Molmil
Crystal structure of FGF-1, S50E/V51N
Descriptor: FORMIC ACID, Heparin-binding growth factor 1
Authors:Kim, J, Blaber, M.
Deposit date:2003-07-15
Release date:2004-07-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Sequence swapping does not result in conformation swapping for the beta4/beta5 and beta8/beta9 beta-hairpin turns in human acidic fibroblast growth factor
Protein Sci., 14, 2005

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