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PDB: 242 results

4GSU
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Structural basis for the inhibition of Mycobacterium tuberculosis L,D-transpeptidase by meropenem, a drug effective against extensively drug-resistant strains
Descriptor: (2S,3R,4S)-4-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-2-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-3-methyl-3,4-dihydro-2H-pyrrole-5-carboxylic acid, Probable conserved lipoprotein LPPS
Authors:Kim, H.S, Kim, J, Im, H.N, Yoon, J.Y, An, D.R, Yoon, H.J, Kim, J.Y, Min, H.K, Kim, S.-J, Lee, J.Y, Han, B.W, Suh, S.W.
Deposit date:2012-08-28
Release date:2013-02-27
Last modified:2022-02-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the inhibition of Mycobacterium tuberculosis L,D-transpeptidase by meropenem, a drug effective against extensively drug-resistant strains
Acta Crystallogr.,Sect.D, 69, 2013
4GSQ
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Structural basis for the inhibition of Mycobacterium tuberculosis L,D-transpeptidase by meropenem, a drug effective against extensively drug-resistant strains
Descriptor: CALCIUM ION, GLYCEROL, Probable conserved lipoprotein LPPS
Authors:Kim, H.S, Kim, J, Im, H.N, Yoon, J.Y, An, D.R, Yoon, H.J, Kim, J.Y, Min, H.K, Kim, S.-J, Lee, J.Y, Han, B.W, Suh, S.W.
Deposit date:2012-08-28
Release date:2013-02-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for the inhibition of Mycobacterium tuberculosis L,D-transpeptidase by meropenem, a drug effective against extensively drug-resistant strains
Acta Crystallogr.,Sect.D, 69, 2013
3LP6
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Crystal Structure of Rv3275c-E60A from Mycobacterium tuberculosis at 1.7A resolution
Descriptor: FORMIC ACID, GLYCEROL, Phosphoribosylaminoimidazole carboxylase catalytic subunit
Authors:Kim, H, Yu, M, Hung, L.-W, Terwilliger, T.C, Kim, C.-Y, Integrated Center for Structure and Function Innovation (ISFI), TB Structural Genomics Consortium (TBSGC)
Deposit date:2010-02-04
Release date:2010-06-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.702 Å)
Cite:Crystal Structure of Rv3275c-E60A from Mycobacterium tuberculosis at 1.7A Resolution
To be Published
5ZHW
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BU of 5zhw by Molmil
VanYB in complex with D-Alanine-D-Alanine
Descriptor: COPPER (II) ION, D-ALANINE, D-alanyl-D-alanine carboxypeptidase, ...
Authors:Kim, H.S, Hahn, H.
Deposit date:2018-03-13
Release date:2018-09-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Structural basis for the substrate recognition of peptidoglycan pentapeptides by Enterococcus faecalis VanYB.
Int. J. Biol. Macromol., 119, 2018
6A6A
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BU of 6a6a by Molmil
VanYB in complex with D-Alanine
Descriptor: ACETATE ION, D-ALANINE, D-alanyl-D-alanine carboxypeptidase, ...
Authors:Kim, H.S, Hahn, H.
Deposit date:2018-06-27
Release date:2018-09-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structural basis for the substrate recognition of peptidoglycan pentapeptides by Enterococcus faecalis VanYB.
Int. J. Biol. Macromol., 119, 2018
5ZHF
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BU of 5zhf by Molmil
Structure of VanYB unbound
Descriptor: D-alanyl-D-alanine carboxypeptidase, GLYCEROL, TETRAETHYLENE GLYCOL, ...
Authors:Kim, H.S, Hahn, H.
Deposit date:2018-03-13
Release date:2018-09-05
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural basis for the substrate recognition of peptidoglycan pentapeptides by Enterococcus faecalis VanYB.
Int. J. Biol. Macromol., 119, 2018
8CPA
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BU of 8cpa by Molmil
COMPARISON OF THE STRUCTURES OF THREE CARBOXYPEPTIDASE A-PHOSPHONATE COMPLEXES DETERMINED BY X-RAY CRYSTALLOGRAPHY
Descriptor: CARBOXYPEPTIDASE A, O-(((1R)-((N-(PHENYL-METHOXY-CARBONYL)-ALANYL)-AMINO)METHYL)HYDROXYPHOSPHINYL)3-L-PHENYLLACTATE, ZINC ION
Authors:Kim, H, Lipscomb, W.N.
Deposit date:1991-05-21
Release date:1994-01-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Comparison of the structures of three carboxypeptidase A-phosphonate complexes determined by X-ray crystallography.
Biochemistry, 30, 1991
4XZZ
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BU of 4xzz by Molmil
Structure of Helicobacter pylori Csd6 in the ligand-free state
Descriptor: Conserved hypothetical secreted protein, GLYCEROL
Authors:Kim, H.S, Im, H.N, Yoon, H.J, Suh, S.W.
Deposit date:2015-02-05
Release date:2015-09-02
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:The Cell Shape-determining Csd6 Protein from Helicobacter pylori Constitutes a New Family of l,d-Carboxypeptidase
J.Biol.Chem., 290, 2015
4Y4V
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BU of 4y4v by Molmil
Structure of Helicobacter pylori Csd6 in the D-Ala-bound state
Descriptor: Conserved hypothetical secreted protein, D-ALANINE, GLYCEROL
Authors:Kim, H.S, Im, H.N, Yoon, H.J, Suh, S.W.
Deposit date:2015-02-11
Release date:2015-09-02
Last modified:2022-03-23
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:The Cell Shape-determining Csd6 Protein from Helicobacter pylori Constitutes a New Family of l,d-Carboxypeptidase
J.Biol.Chem., 290, 2015
6D7K
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BU of 6d7k by Molmil
Complex structure of Methane monooxygenase hydroxylase in complex with inhibitory subunit
Descriptor: FE (III) ION, FORMIC ACID, HEXANE-1,6-DIOL, ...
Authors:Kim, H, Lee, S.J, Cho, U.-S.
Deposit date:2018-04-24
Release date:2019-06-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:MMOD-induced structural changes of hydroxylase in soluble methane monooxygenase.
Sci Adv, 5, 2019
3KT7
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BU of 3kt7 by Molmil
Crystal structure of Tpa1 from Saccharomyces cerevisiae, a component of the messenger ribonucleoprotein complex
Descriptor: 2-OXOGLUTARIC ACID, FE (III) ION, GLYCEROL, ...
Authors:Kim, H.S, Kim, H.L, Kim, K.H, Kim, D.J, Lee, S.J, Yoon, J.Y, Yoon, H.J, Lee, H.Y, Park, S.B, Kim, S.-J, Lee, J.Y, Suh, S.W.
Deposit date:2009-11-24
Release date:2010-01-19
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Crystal structure of Tpa1 from Saccharomyces cerevisiae, a component of the messenger ribonucleoprotein complex
Nucleic Acids Res., 38, 2010
3KT4
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BU of 3kt4 by Molmil
Crystal structure of Tpa1 from Saccharomyces cerevisiae, a component of the messenger ribonucleoprotein complex
Descriptor: FE (III) ION, PKHD-type hydroxylase TPA1
Authors:Kim, H.S, Kim, H.L, Kim, K.H, Kim, D.J, Lee, S.J, Yoon, J.Y, Yoon, H.J, Lee, H.Y, Park, S.B, Kim, S.-J, Lee, J.Y, Suh, S.W.
Deposit date:2009-11-24
Release date:2010-01-19
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Crystal structure of Tpa1 from Saccharomyces cerevisiae, a component of the messenger ribonucleoprotein complex
Nucleic Acids Res., 38, 2010
3KT1
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BU of 3kt1 by Molmil
Crystal structure of Tpa1 from Saccharomyces cerevisiae, a component of the messenger ribonucleoprotein complex
Descriptor: FE (III) ION, GLYCEROL, PKHD-type hydroxylase TPA1, ...
Authors:Kim, H.S, Kim, H.L, Kim, K.H, Kim, D.J, Lee, S.J, Yoon, J.Y, Yoon, H.J, Lee, H.Y, Park, S.B, Kim, S.-J, Lee, J.Y, Suh, S.W.
Deposit date:2009-11-24
Release date:2010-01-19
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Tpa1 from Saccharomyces cerevisiae, a component of the messenger ribonucleoprotein complex
Nucleic Acids Res., 38, 2010
8J1O
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BU of 8j1o by Molmil
Crystal structure of HaloTag complexed with BTTA
Descriptor: CHLORIDE ION, Haloalkane dehalogenase, N-[[1-[2-[2-(2-hexoxyethoxy)ethoxy]ethyl]-1,2,3-triazol-4-yl]methyl]-1-(1H-1,2,3-triazol-4-yl)-N-(2H-1,2,3-triazol-4-ylmethyl)methanamine, ...
Authors:Kim, H, Rhee, H, Lee, C.
Deposit date:2023-04-13
Release date:2024-04-17
Method:X-RAY DIFFRACTION (1.991 Å)
Cite:Crystal structure of HaloTag complexed with BTTA
To Be Published
4GSR
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BU of 4gsr by Molmil
Structural basis for the inhibition of Mycobacterium tuberculosis L,D-transpeptidase by meropenem, a drug effective against extensively drug-resistant strains
Descriptor: 2-(ETHYLMERCURI-THIO)-BENZOIC ACID, GLYCEROL, Probable conserved lipoprotein LPPS
Authors:Kim, H.S, Kim, J, Im, H.N, Yoon, J.Y, An, D.R, Yoon, H.J, Kim, J.Y, Min, H.K, Kim, S.-J, Lee, J.Y, Han, B.W, Suh, S.W.
Deposit date:2012-08-28
Release date:2013-02-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural basis for the inhibition of Mycobacterium tuberculosis L,D-transpeptidase by meropenem, a drug effective against extensively drug-resistant strains
Acta Crystallogr.,Sect.D, 69, 2013
4XTT
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BU of 4xtt by Molmil
Structural Studies of Potassium Transport Protein KtrA Regulator of Conductance of K+ (RCK) C domain in Complex with Cyclic Diadenosine Monophosphate (c-di-AMP)
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, Putative potassium transport protein
Authors:Kim, H, Youn, S.J, Kim, S.O, Ko, J, Lee, J.O, Choi, B.S.
Deposit date:2015-01-24
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.708 Å)
Cite:Structural Studies of Potassium Transport Protein KtrA Regulator of Conductance of K+ (RCK) C Domain in Complex with Cyclic Diadenosine Monophosphate (c-di-AMP)
J.Biol.Chem., 290, 2015
5C5Z
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BU of 5c5z by Molmil
Crystal structure analysis of c4763, a uropathogenic E. coli-specific protein
Descriptor: Glutamyl-tRNA amidotransferase
Authors:Kim, H, Choi, J, Kim, D, Kim, K.K.
Deposit date:2015-06-22
Release date:2015-08-19
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure analysis of c4763, a uropathogenic Escherichia coli-specific protein.
Acta Crystallogr.,Sect.F, 71, 2015
7BWK
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BU of 7bwk by Molmil
Structure of DotL(656-783)-IcmS-IcmW-LvgA-VpdB(461-590) derived from Legionella pneumophila
Descriptor: Hypothetical virulence protein, IcmO (DotL), IcmS, ...
Authors:Kim, H, Kwak, M.J, Oh, B.H.
Deposit date:2020-04-14
Release date:2020-06-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:Structural basis for effector protein recognition by the Dot/Icm Type IVB coupling protein complex.
Nat Commun, 11, 2020
6CPA
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BU of 6cpa by Molmil
CRYSTAL STRUCTURE OF THE COMPLEX OF CARBOXYPEPTIDASE A WITH A STRONGLY BOUND PHOSPHONATE IN A NEW CRYSTALLINE FORM: COMPARISON WITH STRUCTURES OF OTHER COMPLEXES
Descriptor: CARBOXYPEPTIDASE A, O-(((1R)-((N-PHENYLMETHOXYCARBONYL-L-ALANYL)AMINO)ETHYL)HYDROXYPHOSPHONO)-L-BENZYLACETIC ACID, ZINC ION
Authors:Kim, H, Lipscomb, W.N.
Deposit date:1990-02-15
Release date:1991-10-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the complex of carboxypeptidase A with a strongly bound phosphonate in a new crystalline form: comparison with structures of other complexes.
Biochemistry, 29, 1990
7YCJ
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BU of 7ycj by Molmil
Crystal structure of Vac8 bound to Vac17
Descriptor: Vacuolar protein 8, vacuole-related protein 17
Authors:Kim, H, Kim, H, Lee, C.
Deposit date:2022-07-01
Release date:2023-07-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Crystal structure of Vac8 bound to Vac17
To Be Published
3BG4
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BU of 3bg4 by Molmil
The crystal structure of guamerin in complex with chymotrypsin and the development of an elastase-specific inhibitor
Descriptor: Chymotrypsin A chain A, Chymotrypsin A chain B, Chymotrypsin A chain C, ...
Authors:Kim, H, Chu, T.T.T, Kim, D.Y, Kim, D.R, Nguyen, C.M.T, Choi, J, Lee, J.R, Hahn, M.J, Kim, K.K.
Deposit date:2007-11-26
Release date:2008-07-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of guamerin in complex with chymotrypsin and the development of an elastase-specific inhibitor.
J.Mol.Biol., 376, 2008
3JUK
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BU of 3juk by Molmil
The Crystal Structure of UDP-glucose pyrophosphorylase complexed with UDP-glucose
Descriptor: MAGNESIUM ION, UDP-glucose pyrophosphorylase (GalU), URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Kim, H, Kim, K.K.
Deposit date:2009-09-15
Release date:2010-03-31
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for the reaction mechanism of UDP-glucose pyrophosphorylase
Mol.Cells, 29, 2010
5CUF
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BU of 5cuf by Molmil
X-ray crystal structure of SeMet human Sestrin2
Descriptor: Sestrin-2
Authors:Kim, H, An, S, Ro, S.-H, Lee, J.H, Cho, U.-S.
Deposit date:2015-07-24
Release date:2016-01-13
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Janus-faced Sestrin2 controls ROS and mTOR signalling through two separate functional domains.
Nat Commun, 6, 2015
3JUJ
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BU of 3juj by Molmil
The crystal structure of apo- UDP-glucose pyrophosphorylase
Descriptor: UDP-glucose pyrophosphorylase (GalU)
Authors:Kim, H, Kim, K.K.
Deposit date:2009-09-15
Release date:2010-03-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for the reaction mechanism of UDP-glucose pyrophosphorylase
Mol.Cells, 29, 2010
5X90
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BU of 5x90 by Molmil
Structure of DotL(656-783)-IcmS-IcmW-LvgA derived from Legionella pneumophila
Descriptor: Hypothetical virulence protein, IcmO (DotL), IcmS, ...
Authors:Kim, H, Kwak, M.J, Kim, J.D, Kim, Y.G, Oh, B.H.
Deposit date:2017-03-04
Release date:2017-06-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Architecture of the type IV coupling protein complex of Legionella pneumophila
Nat Microbiol, 2, 2017

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