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PDB: 522 件

7EC1
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BU of 7ec1 by Molmil
Crystal structure of SdgB (ligand-free form)
分子名称: GLYCEROL, Glycosyl transferase, group 1 family protein, ...
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-03-11
公開日2021-03-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7EC6
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BU of 7ec6 by Molmil
Crystal structure of SdgB (complexed with peptides)
分子名称: ASP-SER-ASP, Glycosyl transferase, group 1 family protein
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-03-11
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
8KCA
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BU of 8kca by Molmil
Crystal structure of DDX53 helicase domain
分子名称: Probable ATP-dependent RNA helicase DDX53
著者Park, S, Yang, J.B, Jung, H.S, Kim, H.Y.
登録日2023-08-06
公開日2023-08-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structural insight into crystal structure of helicase domain of DDX53.
Biochem.Biophys.Res.Commun., 677, 2023
4RHF
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BU of 4rhf by Molmil
Crystal structure of UbiX mutant V47S from Colwellia psychrerythraea 34H
分子名称: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, SULFATE ION
著者Do, H, Kim, S.J, Lee, C.W, Kim, H.-W, Park, H.H, Kim, H.M, Park, H, Park, H.J, Lee, J.H.
登録日2014-10-02
公開日2015-02-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.764 Å)
主引用文献Crystal structure of UbiX, an aromatic acid decarboxylase from the psychrophilic bacterium Colwellia psychrerythraea that undergoes FMN-induced conformational changes.
Sci Rep, 5, 2015
4RHE
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Crystal structure of UbiX, an aromatic acid decarboxylase from the Colwellia psychrerythraea 34H
分子名称: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, FLAVIN MONONUCLEOTIDE, SULFATE ION
著者Do, H, Kim, S.J, Lee, C.W, Kim, H.-W, Park, H.H, Kim, H.M, Park, H, Park, H.J, Lee, J.H.
登録日2014-10-02
公開日2015-02-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.003 Å)
主引用文献Crystal structure of UbiX, an aromatic acid decarboxylase from the psychrophilic bacterium Colwellia psychrerythraea that undergoes FMN-induced conformational changes.
Sci Rep, 5, 2015
4J15
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BU of 4j15 by Molmil
Crystal structure of human cytosolic aspartyl-tRNA synthetase, a component of multi-tRNA synthetase complex
分子名称: Aspartate--tRNA ligase, cytoplasmic, GLYCEROL
著者Kim, K.R, Park, S.H, Kim, H.S, Kim, B.-G, Kim, D.G, Rhee, K.H, Park, M.S, Kim, H.-J, Kim, S, Han, B.W.
登録日2013-02-01
公開日2013-05-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Crystal structure of human cytosolic aspartyl-tRNA synthetase, a component of multi-tRNA synthetase complex
Proteins, 81, 2013
8GN5
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BU of 8gn5 by Molmil
Designed pH-responsive P22 VLP
分子名称: Major capsid protein
著者Kim, K.J, Kim, G, Bae, J.H, Song, J.J, Kim, H.S.
登録日2022-08-23
公開日2024-01-31
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (4.02 Å)
主引用文献A pH-Responsive Virus-Like Particle as a Protein Cage for a Targeted Delivery.
Adv Healthc Mater, 13, 2024
5CSS
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BU of 5css by Molmil
Crystal structure of triosephosphate isomerase from Thermoplasma acidophilum with glycerol 3-phosphate
分子名称: CHLORIDE ION, SN-GLYCEROL-3-PHOSPHATE, Triosephosphate isomerase
著者Park, S.H, Kim, H.S, Song, M.K, Kim, K.R, Park, J.S, Han, B.W.
登録日2015-07-23
公開日2016-06-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Structure and Stability of the Dimeric Triosephosphate Isomerase from the Thermophilic Archaeon Thermoplasma acidophilum.
Plos One, 10, 2015
7DGQ
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BU of 7dgq by Molmil
Activity optimized supercomplex state1
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
著者Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
登録日2020-11-12
公開日2022-05-18
実験手法ELECTRON MICROSCOPY (5 Å)
主引用文献A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
7DGZ
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BU of 7dgz by Molmil
Activity optimized complex I (closed form)
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
著者Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
登録日2020-11-12
公開日2022-05-18
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
7DKF
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BU of 7dkf by Molmil
Activity optimized supercomplex state4
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
著者Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
登録日2020-11-24
公開日2022-05-18
実験手法ELECTRON MICROSCOPY (8.3 Å)
主引用文献A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
7DH0
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BU of 7dh0 by Molmil
Activity optimized complex I (open form)
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
著者Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
登録日2020-11-12
公開日2022-05-18
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
7DGS
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BU of 7dgs by Molmil
Activity optimized supercomplex state3
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
著者Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
登録日2020-11-12
公開日2022-05-18
実験手法ELECTRON MICROSCOPY (7.8 Å)
主引用文献A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
4RNY
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BU of 4rny by Molmil
Structure of Helicobacter pylori Csd3 from the orthorhombic crystal
分子名称: Conserved hypothetical secreted protein, GLYCEROL, SULFATE ION, ...
著者An, D.R, Kim, H.S, Kim, J, Im, H.N, Yoon, H.J, Yoon, J.Y, Jang, J.Y, Hesek, D, Lee, M, Mobashery, S, Kim, S.-J, Lee, B.I, Suh, S.W.
登録日2014-10-27
公開日2015-03-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of Csd3 from Helicobacter pylori, a cell shape-determining metallopeptidase.
Acta Crystallogr.,Sect.D, 71, 2015
4RNZ
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BU of 4rnz by Molmil
Structure of Helicobacter pylori Csd3 from the hexagonal crystal
分子名称: Conserved hypothetical secreted protein, GLYCEROL, NICKEL (II) ION, ...
著者An, D.R, Kim, H.S, Kim, J, Im, H.N, Yoon, H.J, Yoon, J.Y, Jang, J.Y, Hesek, D, Lee, M, Mobashery, S, Kim, S.-J, Lee, B.I, Suh, S.W.
登録日2014-10-27
公開日2015-03-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structure of Csd3 from Helicobacter pylori, a cell shape-determining metallopeptidase.
Acta Crystallogr.,Sect.D, 71, 2015
8YBE
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BU of 8ybe by Molmil
Cryo-EM structure of Maltose Binding Protein
分子名称: Maltose/maltodextrin-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Yoo, Y, Park, K, Kim, H.
登録日2024-02-13
公開日2024-03-06
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Atomic resolution structure of MBP using Cryo-EM
To Be Published
5CSR
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BU of 5csr by Molmil
Crystal structure of triosephosphate isomerase from Thermoplasma acidophilium
分子名称: CHLORIDE ION, GLYCEROL, Triosephosphate isomerase
著者Park, S.H, Kim, H.S, Song, M.K, Park, H.S, Han, B.W.
登録日2015-07-23
公開日2016-06-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Structure and Stability of the Dimeric Triosephosphate Isomerase from the Thermophilic Archaeon Thermoplasma acidophilum.
Plos One, 10, 2015
2F5G
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BU of 2f5g by Molmil
Crystal structure of IS200 transposase
分子名称: Transposase, putative
著者Lee, H.H, Yoon, J.Y, Kim, H.S, Kang, J.Y, Kim, K.H, Kim, D.J, Suh, S.W.
登録日2005-11-25
公開日2005-12-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal Structure of a Metal Ion-bound IS200 Transposase
J.Biol.Chem., 281, 2006
2F4F
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Crystal structure of IS200 transposase
分子名称: MANGANESE (II) ION, Transposase, putative
著者Lee, H.H, Yoon, J.Y, Kim, H.S, Kang, J.Y, Kim, K.H, Kim, D.J, Suh, S.W.
登録日2005-11-23
公開日2005-12-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of a Metal Ion-bound IS200 Transposase
J.Biol.Chem., 281, 2006
8X6M
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BU of 8x6m by Molmil
Crystal Structure of Glycerol Dehydrogenase in the Presence of NAD+ and Glycerol
分子名称: GLYCEROL, Glycerol dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Park, T, Kang, J.Y, Jin, M, Yang, J, Kim, H, Noh, C, Eom, S.H.
登録日2023-11-21
公開日2024-03-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural insights into the octamerization of glycerol dehydrogenase.
Plos One, 19, 2024
5G2A
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BU of 5g2a by Molmil
The crystal structure of light-driven chloride pump ClR at pH 6.0 with Bromide ion.
分子名称: BROMIDE ION, CHLORIDE PUMPING RHODOPSIN, RETINAL
著者Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
登録日2016-04-07
公開日2016-10-19
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献Crystal Structure and Functional Characterization of a Light-Driven Chloride Pump Having an Ntq Motif.
Nat.Commun., 7, 2016
4RCP
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BU of 4rcp by Molmil
Crystal structure of Plk1 Polo-box domain in complex with PL-2
分子名称: 1,2-ETHANEDIOL, PL-2, Serine/threonine-protein kinase PLK1
著者Lee, W.C, Song, J.H, Kim, H.Y.
登録日2014-09-16
公開日2014-11-12
最終更新日2015-01-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A new class of peptidomimetics targeting the polo-box domain of polo-like kinase 1.
J.Med.Chem., 58, 2015
5G54
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BU of 5g54 by Molmil
The crystal structure of light-driven chloride pump ClR at pH 4.5
分子名称: CHLORIDE ION, Chloride pumping rhodopsin, OLEIC ACID, ...
著者Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
登録日2016-05-19
公開日2016-10-19
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure and Functional Characterization of a Light-Driven Chloride Pump Having an Ntq Motif.
Nat.Commun., 7, 2016
5G28
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BU of 5g28 by Molmil
The crystal structure of light-driven chloride pump ClR at pH 6.0.
分子名称: CHLORIDE ION, CHLORIDE PUMPING RHODOPSIN, OLEIC ACID, ...
著者Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
登録日2016-04-07
公開日2016-10-19
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Crystal Structure and Functional Characterization of a Light-Driven Chloride Pump Having an Ntq Motif.
Nat.Commun., 7, 2016
5G2D
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The crystal structure of light-driven chloride pump ClR (T102N) mutant at pH 4.5.
分子名称: CHLORIDE ION, CHLORIDE PUMP RHODOPSIN, DI(HYDROXYETHYL)ETHER, ...
著者Kim, K.L, Kwon, S.K, Jun, S.H, Cha, J.S, Kim, H.Y, Kim, J.H, Cho, H.S.
登録日2016-04-07
公開日2016-10-19
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure and Functional Characterization of a Light-Driven Chloride Pump Having an Ntq Motif.
Nat.Commun., 7, 2016

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