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PDB: 49 results

6JL3
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BU of 6jl3 by Molmil
Crystal Structure of the UBL domain of Plasmodium Falciparum Dsk2
Descriptor: Ubiquitin domain-containing protein DSK2,putative
Authors:Gupta, I, Khan, S.
Deposit date:2019-03-03
Release date:2020-02-19
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.303 Å)
Cite:The recognition of proteasomal receptors by Plasmodium falciparum DSK2.
Mol.Biochem.Parasitol., 236, 2020
4PG3
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BU of 4pg3 by Molmil
Crystal structure of KRS complexed with inhibitor
Descriptor: LYSINE, Lysine--tRNA ligase, cladosporin
Authors:Sharma, A, Yogavel, M, Khan, S, Sharma, A, Belrhali, H.
Deposit date:2014-05-01
Release date:2014-07-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.696 Å)
Cite:Structural basis of malaria parasite lysyl-tRNA synthetase inhibition by cladosporin.
J. Struct. Funct. Genomics, 15, 2014
4OO9
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BU of 4oo9 by Molmil
Structure of the human class C GPCR metabotropic glutamate receptor 5 transmembrane domain in complex with the negative allosteric modulator mavoglurant
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Mavoglurant, Metabotropic glutamate receptor 5, ...
Authors:Dore, A.S, Okrasa, K, Patel, J.C, Serrano-Vega, M, Bennett, K, Cooke, R.M, Errey, J.C, Jazayeri, A, Khan, S, Tehan, B, Weir, M, Wiggin, G.R, Marshall, F.H.
Deposit date:2014-01-31
Release date:2014-07-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of class C GPCR metabotropic glutamate receptor 5 transmembrane domain.
Nature, 511, 2014
3VGJ
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BU of 3vgj by Molmil
Crystal of Plasmodium falciparum tyrosyl-tRNA synthetase (PfTyrRS)in complex with adenylate analog
Descriptor: ADENOSINE MONOPHOSPHATE, TYROSINE, Tyrosyl-tRNA synthetase, ...
Authors:Banday, M.M, Yogavel, M, Bhatt, T.K, Khan, S, Sharma, A, Sharma, A.
Deposit date:2011-08-14
Release date:2012-07-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.212 Å)
Cite:Malaria parasite tyrosyl-tRNA synthetase secretion triggers pro-inflammatory responses.
Nat Commun, 2, 2011
5ZKH
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BU of 5zkh by Molmil
Crystal Structure of N-terminal Domain of Plasmodium falciparum p43
Descriptor: Aminoacyl tRNA synthetase complex-interacting multifunctional protein P43
Authors:Manickam, Y, Sharma, A, Khan, S.
Deposit date:2018-03-23
Release date:2019-04-24
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.991 Å)
Cite:Structural analysis of aminoacyl-tRNA synthetase-interacting multifunctional proteins from plasmodium species
To Be Published
4V63
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Structural basis for translation termination on the 70S ribosome.
Descriptor: 16S RRNA, 23S RRNA, 30S ribosomal protein S10, ...
Authors:Laurberg, M, Asahara, H, Korostelev, A, Zhu, J, Trakhanov, S, Noller, H.F.
Deposit date:2008-05-16
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.207 Å)
Cite:Structural basis for translation termination on the 70S ribosome
Nature, 454, 2008
4V4J
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BU of 4v4j by Molmil
Interactions and Dynamics of the Shine-Dalgarno Helix in the 70S Ribosome.
Descriptor: 16S RNA, 23S LARGE SUBUNIT RIBOSOMAL RNA, 30S ribosomal protein S10, ...
Authors:Korostelev, A, Trakhanov, S, Asahara, H, Laurberg, M, Noller, H.F.
Deposit date:2007-07-18
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.83 Å)
Cite:Interactions and dynamics of the Shine Dalgarno helix in the 70S ribosome.
Proc.Natl.Acad.Sci.Usa, 104, 2007
4V4I
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Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.
Descriptor: 16S SMALL SUBUNIT RIBOSOMAL RNA, 23S LARGE SUBUNIT RIBOSOMAL RNA, 30S ribosomal protein S10, ...
Authors:Korostelev, A, Trakhanov, S, Laurberg, M, Noller, H.F.
Deposit date:2007-02-15
Release date:2014-07-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.71 Å)
Cite:Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements
Cell(Cambridge,Mass.), 126, 2006
4V85
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Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Zhou, J, Lancaster, L, Trakhanov, S, Noller, H.F.
Deposit date:2011-06-13
Release date:2014-07-09
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of release factor RF3 trapped in the GTP state on a rotated conformation of the ribosome.
Rna, 18, 2012
4V89
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Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Zhou, J, Lancaster, L, Trakhanov, S, Noller, H.F.
Deposit date:2011-11-17
Release date:2014-07-09
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Crystal structure of release factor RF3 trapped in the GTP state on a rotated conformation of the ribosome.
Rna, 18, 2012
12E8
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BU of 12e8 by Molmil
2E8 FAB FRAGMENT
Descriptor: IGG1-KAPPA 2E8 FAB (HEAVY CHAIN), IGG1-KAPPA 2E8 FAB (LIGHT CHAIN)
Authors:Rupp, B, Trakhanov, S.
Deposit date:1998-03-14
Release date:1998-08-05
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of a monoclonal 2E8 Fab antibody fragment specific for the low-density lipoprotein-receptor binding region of apolipoprotein E refined at 1.9 A.
Acta Crystallogr.,Sect.D, null, 1999
1HSL
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BU of 1hsl by Molmil
REFINED 1.89 ANGSTROMS STRUCTURE OF THE HISTIDINE-BINDING PROTEIN COMPLEXED WITH HISTIDINE AND ITS RELATIONSHIP WITH MANY OTHER ACTIVE TRANSPORT(SLASH)CHEMOSENSORY RECEPTORS
Descriptor: CADMIUM ION, HISTIDINE, HISTIDINE-BINDING PROTEIN
Authors:Yao, N, Trakhanov, S, Quiocho, F.A.
Deposit date:1994-01-03
Release date:1994-05-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Refined 1.89-A structure of the histidine-binding protein complexed with histidine and its relationship with many other active transport/chemosensory proteins.
Biochemistry, 33, 1994
3QYA
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BU of 3qya by Molmil
Crystal structure of a red-emitter mutant of Lampyris turkestanicus luciferase
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Kheirabadi, M, Gohlke, U, Hossein Khani, S, Heinemann, U, Naderi-Manesh, H.
Deposit date:2011-03-03
Release date:2012-03-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Crystal structure of native and a mutant of Lampyris turkestanicus luciferase implicate in bioluminescence color shift.
Biochim.Biophys.Acta, 1834, 2013
6Q84
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BU of 6q84 by Molmil
Crystal structure of RanGTP-Pdr6-eIF5A export complex
Descriptor: Eukaryotic translation initiation factor 5A-1, GTP-binding nuclear protein Ran, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Aksu, M, Trakhanov, S, Vera-Rodriguez, A, Gorlich, D.
Deposit date:2018-12-14
Release date:2019-05-01
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Structural basis for the nuclear import and export functions of the biportin Pdr6/Kap122.
J.Cell Biol., 218, 2019
5E0Q
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BU of 5e0q by Molmil
Crystal structure of the Nup98 C-terminal domain bound to nanobody TP377
Descriptor: Anti-Nup98 Nanobody TP377, Nuclear pore complex protein Nup98-Nup96
Authors:Pleiner, T, Trakhanov, S, Goerlich, D.
Deposit date:2015-09-29
Release date:2015-12-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Nanobodies: site-specific labeling for super-resolution imaging, rapid epitope-mapping and native protein complex isolation.
Elife, 4, 2015
6Q83
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BU of 6q83 by Molmil
Crystal structure of the biportin Pdr6 in complex with UBC9
Descriptor: Importin beta-like protein KAP122, UBC9
Authors:Aksu, M, Trakhanov, S, Vera-Rodriguez, A, Gorlich, D.
Deposit date:2018-12-14
Release date:2019-05-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (4.53 Å)
Cite:Structural basis for the nuclear import and export functions of the biportin Pdr6/Kap122.
J.Cell Biol., 218, 2019
6Q82
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BU of 6q82 by Molmil
Crystal structure of the biportin Pdr6 in complex with RanGTP
Descriptor: GTP-binding nuclear protein Ran, GUANOSINE-5'-TRIPHOSPHATE, Importin beta-like protein KAP122, ...
Authors:Aksu, M, Vera-Rodriguez, A, Trakhanov, S, Gorlich, D.
Deposit date:2018-12-14
Release date:2019-05-01
Last modified:2019-06-12
Method:X-RAY DIFFRACTION (2.994 Å)
Cite:Structural basis for the nuclear import and export functions of the biportin Pdr6/Kap122.
J.Cell Biol., 218, 2019
7NOW
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BU of 7now by Molmil
Complex of Nucleoporin-98 and nanobody MS98-27 solved at 1.85A resolution
Descriptor: Anti-Nup98 nanobody MS98-27, Nuclear pore complex protein Nup98, SODIUM ION, ...
Authors:Sola-Colom, M, Trakhanov, S, Goerlich, D.
Deposit date:2021-02-26
Release date:2021-04-07
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A checkpoint function for Nup98 in nuclear pore formation suggested by novel inhibitory nanobodies.
Embo J., 2024
7NQA
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BU of 7nqa by Molmil
Crystal structure of Nucleoporin-98 nanobody MS98-6 complex solved at 2.2A resolution
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Anti-Nup98 Nanobody MS98-6, Nuclear pore complex protein Nup98-Nup96, ...
Authors:Sola-Colom, M, Trakhanov, S, Goerlich, D.
Deposit date:2021-03-01
Release date:2021-07-21
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A checkpoint function for Nup98 in nuclear pore formation suggested by novel inhibitory nanobodies.
Embo J., 2024
1DPE
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BU of 1dpe by Molmil
DIPEPTIDE-BINDING PROTEIN
Descriptor: CADMIUM ION, DIPEPTIDE-BINDING PROTEIN
Authors:Nickitenko, A.V, Trakhanov, S, Quiocho, F.A.
Deposit date:1995-07-25
Release date:1996-08-17
Last modified:2018-03-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:2 A resolution structure of DppA, a periplasmic dipeptide transport/chemosensory receptor.
Biochemistry, 34, 1995
5DLQ
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BU of 5dlq by Molmil
Crystal structure of RanGTP-Exportin 4-eIF5A complex
Descriptor: Eukaryotic translation initiation factor 5A-1, Exportin-4, GTP-binding nuclear protein Ran, ...
Authors:Aksu, M, Trakhanov, S, Gorlich, D.
Deposit date:2015-09-07
Release date:2016-06-22
Last modified:2016-06-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of the exportin Xpo4 in complex with RanGTP and the hypusine-containing translation factor eIF5A.
Nat Commun, 7, 2016
5C3L
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BU of 5c3l by Molmil
Structure of the metazoan Nup62.Nup58.Nup54 nucleoporin complex.
Descriptor: Nanobody Nb15, Nucleoporin Nup58, Nucleoporin Nup62, ...
Authors:Chug, H, Trakhanov, S, Hulsmann, B.B, Pleiner, T, Gorlich, D.
Deposit date:2015-06-17
Release date:2015-08-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of the metazoan Nup62Nup58Nup54 nucleoporin complex.
Science, 350, 2015
5C2U
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BU of 5c2u by Molmil
Ferredoxin-like domain of nucleoporin Nup54 bound to a nanobody
Descriptor: Nanobody, Nup54
Authors:Chug, H, Trakhanov, S, Hulsmann, B.B, Pleiner, T, Gorlich, D.
Deposit date:2015-06-16
Release date:2015-08-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of the metazoan Nup62Nup58Nup54 nucleoporin complex.
Science, 350, 2015
4M46
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BU of 4m46 by Molmil
Crystal structure of a green-emitter native of Lampyris turkestanicus luciferase
Descriptor: Luciferase
Authors:Sharafian, Z, Hosseinkhani, S, Naderi-manesh, H.
Deposit date:2013-08-06
Release date:2013-10-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of native and a mutant of Lampyris turkestanicus luciferase implicate in bioluminescence color shift.
Biochim.Biophys.Acta, 1834, 2013
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