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PDB: 84 件
4P09
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BU of 4p09 by Molmil
Crystal structure of HOIP PUB domain
分子名称: E3 ubiquitin-protein ligase RNF31
著者Akutsu, M, Schaeffer, V, Olma, M.H, Gomes, L.C, Kawasaki, M, Dikic, I.
登録日2014-02-20
公開日2014-05-07
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Binding of OTULIN to the PUB domain of HOIP controls NF-kappa B signaling.
Mol.Cell, 54, 2014
4P0A
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BU of 4p0a by Molmil
Crystal structure of HOIP PUB domain in complex with p97 PIM
分子名称: E3 ubiquitin-protein ligase RNF31, Transitional endoplasmic reticulum ATPase
著者Akutsu, M, Schaeffer, V, Olma, M.H, Gomes, L.C, Kawasaki, M, Dikic, I.
登録日2014-02-20
公開日2014-05-07
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3001 Å)
主引用文献Binding of OTULIN to the PUB domain of HOIP controls NF-kappa B signaling.
Mol.Cell, 54, 2014
4P0B
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BU of 4p0b by Molmil
Crystal structure of HOIP PUB domain in complex with OTULIN PIM
分子名称: E3 ubiquitin-protein ligase RNF31, Ubiquitin thioesterase otulin
著者Akutsu, M, Schaeffer, V, Olma, M.H, Gomes, L.C, Kawasaki, M, Dikic, I.
登録日2014-02-20
公開日2014-05-07
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.7005 Å)
主引用文献Binding of OTULIN to the PUB domain of HOIP controls NF-kappa B signaling.
Mol.Cell, 54, 2014
4XKH
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BU of 4xkh by Molmil
CRYSTAL STRUCTURE OF THE AIRAPL TANDEM UIMS IN COMPLEX WITH A LYS48-LINKED TRI-UBIQUITIN
分子名称: AN1-type zinc finger protein 2B, Polyubiquitin-C
著者Rahighi, S, Kawasaki, M, Stanhill, A, Wakatsuki, S.
登録日2015-01-11
公開日2016-02-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Selective Binding of AIRAPL Tandem UIMs to Lys48-Linked Tri-Ubiquitin Chains.
Structure, 24, 2016
2IEY
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BU of 2iey by Molmil
Crystal Structure of mouse Rab27b bound to GDP in hexagonal space group
分子名称: GUANOSINE-5'-DIPHOSPHATE, Ras-related protein Rab-27B
著者Chavas, L.M.G, Torii, S, Kamikubo, H, Kawasaki, M, Ihara, K, Kato, R, Kataoka, M, Izumi, T, Wakatsuki, S.
登録日2006-09-19
公開日2007-05-01
最終更新日2012-04-11
実験手法X-RAY DIFFRACTION (3.18 Å)
主引用文献Structure of the small GTPase Rab27b shows an unexpected swapped dimer
Acta Crystallogr.,Sect.D, 63, 2007
2IF0
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BU of 2if0 by Molmil
Crystal Structure of mouse Rab27b bound to GDP in monoclinic space group
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ras-related protein Rab-27B
著者Chavas, L.M.G, Torii, S, Kamikubo, H, Kawasaki, M, Ihara, K, Kato, R, Kataoka, M, Izumi, T, Wakatsuki, S.
登録日2006-09-19
公開日2007-05-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the small GTPase Rab27b shows an unexpected swapped dimer
Acta Crystallogr.,Sect.D, 63, 2007
2IEZ
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BU of 2iez by Molmil
Crystal Structure of mouse Rab27b bound to GDP in monoclinic space group
分子名称: CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, Ras-related protein Rab-27B
著者Chavas, L.M.G, Torii, S, Kamikubo, H, Kawasaki, M, Ihara, K, Kato, R, Kataoka, M, Izumi, T, Wakatsuki, S.
登録日2006-09-19
公開日2007-05-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the small GTPase Rab27b shows an unexpected swapped dimer
Acta Crystallogr.,Sect.D, 63, 2007
4Z4K
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BU of 4z4k by Molmil
Crystal structure of GFP-TAX1BP1 UBZ1+2 domain fusion protein
分子名称: Green fluorescent protein,Tax1-binding protein 1, ZINC ION
著者Rohaim, A, Kawasaki, M, Wakatsuki, S.
登録日2015-04-02
公開日2016-04-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A novel mode of ubiquitin recognition by the ubiquitin-binding zinc finger domain of WRNIP1.
Febs J., 283, 2016
4Z4M
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BU of 4z4m by Molmil
Crystal structure of GFP-TAX1BP1 UBZ2 domain fusion protein
分子名称: Green fluorescent protein,Tax1-binding protein 1, ZINC ION
著者Rohaim, A, Kawasaki, M, Wakatsuki, S.
登録日2015-04-02
公開日2016-04-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A novel mode of ubiquitin recognition by the ubiquitin-binding zinc finger domain of WRNIP1.
Febs J., 283, 2016
7CFO
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BU of 7cfo by Molmil
Crystal structure of human RXRalpha ligand binding domain complexed with CBTF-EE.
分子名称: 1-[3-(2-ethoxyethoxy)-5,5,8,8-tetramethyl-6,7-dihydronaphthalen-2-yl]-2-(trifluoromethyl)benzimidazole-5-carboxylic acid, GLYCEROL, Retinoic acid receptor RXR-alpha
著者Watanabe, M, Fujihara, M, Motoyama, T, Kawasaki, M, Yamada, S, Takamura, Y, Ito, S, Makishima, M, Nakano, S, Kakuta, H.
登録日2020-06-27
公開日2021-01-06
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Discovery of a "Gatekeeper" Antagonist that Blocks Entry Pathway to Retinoid X Receptors (RXRs) without Allosteric Ligand Inhibition in Permissive RXR Heterodimers.
J.Med.Chem., 64, 2021
1UJJ
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BU of 1ujj by Molmil
VHS domain of human GGA1 complexed with C-terminal peptide from BACE
分子名称: ADP-ribosylation factor binding protein GGA1, C-terminal peptide from Beta-secretase
著者Shiba, T, Kametaka, S, Kawasaki, M, Shibata, M, Waguri, S, Uchiyama, Y, Wakatsuki, S.
登録日2003-08-05
公開日2004-05-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Insights into the Phosphoregulation of beta-Secretase Sorting Signal by the VHS Domain of GGA1
TRAFFIC, 5, 2004
1UJK
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BU of 1ujk by Molmil
VHS domain of human GGA1 complexed with C-terminal phosphopeptide from BACE
分子名称: ADP-ribosylation factor binding protein GGA1, C-terminal peptide from Beta-secretase, IODIDE ION
著者Shiba, T, Kametaka, S, Kawasaki, M, Shibata, M, Waguri, S, Uchiyama, Y, Wakatsuki, S.
登録日2003-08-05
公開日2004-05-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Insights into the Phosphoregulation of beta-Secretase Sorting Signal by the VHS Domain of GGA1
TRAFFIC, 5, 2004
2DWX
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BU of 2dwx by Molmil
Co-crystal Structure Analysis of GGA1-GAE with the WNSF motif
分子名称: ADP-ribosylation factor-binding protein GGA1, hinge peptide from ADP-ribosylation factor binding protein GGA1
著者Inoue, M, Shiba, T, Yamada, Y, Ihara, K, Kawasaki, M, Kato, R, Nakayama, K, Wakatsuki, S.
登録日2006-08-21
公開日2007-04-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Molecular Basis for Autoregulatory Interaction Between GAE Domain and Hinge Region of GGA1
Traffic, 8, 2007
2DWY
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BU of 2dwy by Molmil
Crystal Structure Analysis of GGA1-GAE
分子名称: ADP-RIBOSYLATION FACTOR BINDING PROTEIN GGA1
著者Inoue, M, Shiba, T, Yamada, Y, Ihara, K, Kawasaki, M, Kato, R, Nakayama, K, Wakatsuki, S.
登録日2006-08-21
公開日2007-04-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular Basis for Autoregulatory Interaction Between GAE Domain and Hinge Region of GGA1
Traffic, 8, 2007
7EH7
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BU of 7eh7 by Molmil
Cryo-EM structure of the octameric state of C-phycocyanin from Thermoleptolyngbya sp. O-77
分子名称: C-phycocyanin alpha chain, C-phycocyanin beta chain, PHYCOCYANOBILIN
著者Minato, T, Teramoto, T, Adachi, N, Hung, N.K, Yamada, K, Kawasaki, M, Akutsu, M, Moriya, T, Senda, T, Ogo, S, Kakuta, Y, Yoon, K.S.
登録日2021-03-28
公開日2021-11-17
実験手法ELECTRON MICROSCOPY (3.71 Å)
主引用文献Non-conventional octameric structure of C-phycocyanin.
Commun Biol, 4, 2021
7EH8
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BU of 7eh8 by Molmil
Cryo-EM structure of the hexameric state of C-phycocyanin from Thermoleptolyngbya sp. O-77
分子名称: C-phycocyanin alpha chain, C-phycocyanin beta chain, PHYCOCYANOBILIN
著者Minato, T, Teramoto, T, Adachi, N, Hung, N.K, Yamada, K, Kawasaki, M, Akutsu, M, Moriya, T, Senda, T, Ogo, S, Kakuta, Y, Yoon, K.S.
登録日2021-03-28
公開日2021-11-17
実験手法ELECTRON MICROSCOPY (3.06 Å)
主引用文献Non-conventional octameric structure of C-phycocyanin.
Commun Biol, 4, 2021
1JWG
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BU of 1jwg by Molmil
VHS Domain of human GGA1 complexed with cation-independent M6PR C-terminal Peptide
分子名称: ADP-ribosylation factor binding protein GGA1, Cation-independent mannose-6-phosphate receptor, IODIDE ION
著者Shiba, T, Takatsu, H, Nogi, T, Matsugaki, N, Kawasaki, M, Igarashi, N, Suzuki, M, Kato, R, Earnest, T, Nakayama, K, Wakatsuki, S.
登録日2001-09-04
公開日2002-03-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for recognition of acidic-cluster dileucine sequence by GGA1.
Nature, 415, 2002
1JWF
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BU of 1jwf by Molmil
Crystal Structure of human GGA1 VHS domain.
分子名称: ADP-ribosylation factor binding protein GGA1
著者Shiba, T, Takatsu, H, Nogi, T, Matsugaki, N, Kawasaki, M, Igarashi, N, Suzuki, M, Kato, R, Earnest, T, Nakayama, K, Wakatsuki, S.
登録日2001-09-04
公開日2002-03-06
最終更新日2018-06-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for recognition of acidic-cluster dileucine sequence by GGA1.
Nature, 415, 2002
1J2J
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BU of 1j2j by Molmil
Crystal structure of GGA1 GAT N-terminal region in complex with ARF1 GTP form
分子名称: ADP-ribosylation factor 1, ADP-ribosylation factor binding protein GGA1, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Shiba, T, Kawasaki, M, Takatsu, H, Nogi, T, Matsugaki, N, Igarashi, N, Suzuki, M, Kato, R, Nakayama, K, Wakatsuki, S.
登録日2003-01-05
公開日2003-05-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Molecular mechanism of membrane recruitment of GGA by ARF in lysosomal protein transport
NAT.STRUCT.BIOL., 10, 2003
1IU1
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BU of 1iu1 by Molmil
Crystal structure of human gamma1-adaptin ear domain
分子名称: gamma1-adaptin
著者Nogi, T, Shiba, Y, Kawasaki, M, Shiba, T, Matsugaki, N, Igarashi, N, Suzuki, M, Kato, R, Takatsu, H, Nakayama, K, Wakatsuki, S.
登録日2002-02-19
公開日2002-07-10
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for the accessory protein recruitment by the gamma-adaptin ear domain.
Nat.Struct.Biol., 9, 2002
7CN0
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BU of 7cn0 by Molmil
Cryo-EM structure of K+-bound hERG channel
分子名称: POTASSIUM ION, potassium channel 1
著者Asai, T, Adachi, N, Moriya, T, Kawasaki, M, Suzuki, K, Senda, T, Murata, T.
登録日2020-07-29
公開日2021-01-20
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cryo-EM Structure of K + -Bound hERG Channel Complexed with the Blocker Astemizole.
Structure, 29, 2021
7CN1
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BU of 7cn1 by Molmil
Cryo-EM structure of K+-bound hERG channel in the presence of astemizole
分子名称: POTASSIUM ION, potassium channel
著者Asai, T, Adachi, N, Moriya, T, Kawasaki, M, Suzuki, K, Senda, T, Murata, T.
登録日2020-07-29
公開日2021-01-20
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-EM Structure of K + -Bound hERG Channel Complexed with the Blocker Astemizole.
Structure, 29, 2021
3VHX
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BU of 3vhx by Molmil
The crystal structure of Arf6-MKLP1 (Mitotic kinesin-like protein 1) complex
分子名称: ADP-ribosylation factor 6, GLYCEROL, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Makyio, H, Takei, T, Ohgi, H, Takahashi, S, Takatsu, H, Ueda, T, Kanaho, Y, Xie, Y, Shin, H.W, Kamikubo, H, Kataoka, M, Kawasaki, M, Kato, R, Wakatsuki, S, Nakayama, K.
登録日2011-09-12
公開日2012-05-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Structural basis for Arf6-MKLP1 complex formation on the Flemming body responsible for cytokinesis
Embo J., 31, 2012
7F3E
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BU of 7f3e by Molmil
Cryo-EM structure of the minimal protein-only RNase P from Aquifex aeolicus
分子名称: RNA-free ribonuclease P
著者Teramoto, T, Koyasu, T, Adachi, N, Kawasaki, M, Moriya, T, Numata, T, Senda, T, Kakuta, Y.
登録日2021-06-16
公開日2021-08-11
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.62 Å)
主引用文献Minimal protein-only RNase P structure reveals insights into tRNA precursor recognition and catalysis.
J.Biol.Chem., 297, 2021
3WXA
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BU of 3wxa by Molmil
X-ray crystal structural analysis of the complex between ALG-2 and Sec31A peptide
分子名称: Programmed cell death protein 6, Protein transport protein Sec31A, ZINC ION
著者Takahashi, T, Suzuki, H, Kawasaki, M, Shibata, H, Wakatsuki, S, Maki, M.
登録日2014-07-29
公開日2015-03-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Structural Analysis of the Complex between Penta-EF-Hand ALG-2 Protein and Sec31A Peptide Reveals a Novel Target Recognition Mechanism of ALG-2
Int J Mol Sci, 16, 2015

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