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PDB: 29 results

1FNK
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CRYSTAL STRUCTURE ANALYSIS OF CHORISMATE MUTASE MUTANT C88K/R90S
Descriptor: PROTEIN (CHORISMATE MUTASE)
Authors:Kast, P, Grisostomi, C, Chen, I.A, Li, S, Krengel, U, Xue, Y, Hilvert, D.
Deposit date:2000-08-22
Release date:2000-10-11
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:A strategically positioned cation is crucial for efficient catalysis by chorismate mutase.
J.Biol.Chem., 275, 2000
1FNJ
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CRYSTAL STRUCTURE ANALYSIS OF CHORISMATE MUTASE MUTANT C88S/R90K
Descriptor: PROTEIN (CHORISMATE MUTASE)
Authors:Kast, P, Grisostomi, C, Chen, I.A, Li, S, Krengel, U, Xue, Y, Hilvert, D.
Deposit date:2000-08-22
Release date:2000-10-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A strategically positioned cation is crucial for efficient catalysis by chorismate mutase.
J.Biol.Chem., 275, 2000
5MPV
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Crystal structure of a Mycobacterium tuberculosis chorismate mutase optimized for high autonomous activity by directed evolution
Descriptor: Intracellular chorismate mutase
Authors:Thorbjornsrud, H.V, Kamarauskaite, J, Kast, P, Krengel, U.
Deposit date:2016-12-19
Release date:2018-08-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Evolving the naturally compromised chorismate mutase from Mycobacterium tuberculosis to top performance.
J.Biol.Chem., 295, 2020
2W1A
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Non-covalent complex between dahp synthase and chorismate mutase from Mycobacterium tuberculosis with bound tsa
Descriptor: 3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE AROG, 8-HYDROXY-2-OXA-BICYCLO[3.3.1]NON-6-ENE-3,5-DICARBOXYLIC ACID, CHORISMATE MUTASE, ...
Authors:Okvist, M, Sasso, S, Roderer, K, Gamper, M, Codoni, G, Krengel, U, Kast, P.
Deposit date:2008-10-16
Release date:2009-07-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure and Function of a Complex between Chorismate Mutase and Dahp Synthase: Efficiency Boost for the Junior Partner.
Embo J., 28, 2009
2W19
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Non-covalent complex between dahp synthase and chorismate mutase from Mycobacterium tuberculosis
Descriptor: 3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE AROG, CHORISMATE MUTASE, GLYCEROL, ...
Authors:Okvist, M, Sasso, S, Roderer, K, Gamper, M, Codoni, G, Krengel, U, Kast, P.
Deposit date:2008-10-16
Release date:2009-07-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure and Function of a Complex between Chorismate Mutase and Dahp Synthase: Efficiency Boost for the Junior Partner.
Embo J., 28, 2009
2FP2
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Secreted Chorismate Mutase from Mycobacterium tuberculosis
Descriptor: 8-HYDROXY-2-OXA-BICYCLO[3.3.1]NON-6-ENE-3,5-DICARBOXYLIC ACID, Chorismate mutase
Authors:Okvist, M, Dey, R, Sasso, S, Grahn, E, Kast, P, Krengel, U.
Deposit date:2006-01-15
Release date:2006-03-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:1.6A Crystal Structure of the Secreted Chorismate Mutase from Mycobacterium tuberculosis: Novel Fold Topology Revealed
J.Mol.Biol., 357, 2006
2FP1
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Secreted Chorismate Mutase from Mycobacterium tuberculosis
Descriptor: Chorismate mutase, LEAD (II) ION
Authors:Okvist, M, Dey, R, Sasso, S, Grahn, E, Kast, P, Krengel, U.
Deposit date:2006-01-15
Release date:2006-03-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:1.6A Crystal Structure of the Secreted Chorismate Mutase from Mycobacterium tuberculosis: Novel Fold Topology Revealed
J.Mol.Biol., 357, 2006
2VKL
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BU of 2vkl by Molmil
X-ray crystal structure of the intracellular Chorismate mutase from Mycobactrerium Tuberculosis in complex with malate
Descriptor: D-MALATE, RV0948C/MT0975
Authors:Okvist, M, Roderer, K, Sasso, S, Kast, P, Krengel, U.
Deposit date:2007-12-20
Release date:2008-01-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure and Function of a Complex between Chorismate Mutase and Dahp Synthase: Efficiency Boost for the Junior Partner.
Embo J., 28, 2009
3ZP7
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BU of 3zp7 by Molmil
Arg90Cit chorismate mutase of Bacillus subtilis in complex with chorismate and prephenate
Descriptor: (3R,4R)-3-[(1-carboxyethenyl)oxy]-4-hydroxycyclohexa-1,5-diene-1-carboxylic acid, CHORISMATE MUTASE AROH, PREPHENIC ACID
Authors:Burschowsky, D, vanEerde, A, Okvist, M, Kienhofer, A, Kast, P, Hilvert, D, Krengel, U.
Deposit date:2013-02-26
Release date:2014-04-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.698 Å)
Cite:Electrostatic Transition State Stabilization Rather Than Reactant Destabilization Provides the Chemical Basis for Efficient Chorismate Mutase Catalysis.
Proc.Natl.Acad.Sci.USA, 111, 2014
3ZP4
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Arg90Cit chorismate mutase of Bacillus subtilis in complex with a transition state analog
Descriptor: 8-HYDROXY-2-OXA-BICYCLO[3.3.1]NON-6-ENE-3,5-DICARBOXYLIC ACID, CHORISMATE MUTASE AROH
Authors:Burschowsky, D, vanEerde, A, Okvist, M, Kienhofer, A, Kast, P, Hilvert, D, Krengel, U.
Deposit date:2013-02-26
Release date:2014-04-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Electrostatic Transition State Stabilization Rather Than Reactant Destabilization Provides the Chemical Basis for Efficient Chorismate Mutase Catalysis.
Proc.Natl.Acad.Sci.USA, 111, 2014
4A29
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Structure of the engineered retro-aldolase RA95.0
Descriptor: 1-(6-METHOXYNAPHTHALEN-2-YL)BUTANE-1,3-DIONE, D-MALATE, ENGINEERED RETRO-ALDOL ENZYME RA95.0
Authors:Giger, L, Caner, S, Kast, P, Baker, D, Ban, N, Hilvert, D.
Deposit date:2011-09-23
Release date:2012-11-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Evolution of a designed retro-aldolase leads to complete active site remodeling.
Nat.Chem.Biol., 9, 2013
4A2R
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BU of 4a2r by Molmil
Structure of the engineered retro-aldolase RA95.5-5
Descriptor: 1-(6-METHOXYNAPHTHALEN-2-YL)BUTANE-1,3-DIONE, INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE
Authors:Giger, L, Caner, S, Kast, P, Baker, D, Ban, N, Hilvert, D.
Deposit date:2011-09-28
Release date:2012-11-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.302 Å)
Cite:Evolution of a designed retro-aldolase leads to complete active site remodeling.
Nat.Chem.Biol., 9, 2013
3ZO8
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BU of 3zo8 by Molmil
Wild-type chorismate mutase of Bacillus subtilis at 1.6 A resolution
Descriptor: CHORISMATE MUTASE AROH
Authors:Burschowsky, D, vanEerde, A, Okvist, M, Kienhofer, A, Kast, P, Hilvert, D, Krengel, U.
Deposit date:2013-02-20
Release date:2014-04-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Electrostatic Transition State Stabilization Rather Than Reactant Destabilization Provides the Chemical Basis for Efficient Chorismate Mutase Catalysis.
Proc.Natl.Acad.Sci.USA, 111, 2014
4A2S
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BU of 4a2s by Molmil
Structure of the engineered retro-aldolase RA95.5
Descriptor: 1-(6-METHOXYNAPHTHALEN-2-YL)BUTANE-1,3-DIONE, INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE
Authors:Giger, L, Caner, S, Kast, P, Baker, D, Ban, N, Hilvert, D.
Deposit date:2011-09-28
Release date:2012-11-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Evolution of a designed retro-aldolase leads to complete active site remodeling.
Nat.Chem.Biol., 9, 2013
3ZOP
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BU of 3zop by Molmil
Arg90Cit chorismate mutase of Bacillus subtilis at 1.6 A resolution
Descriptor: CHORISMATE MUTASE AROH
Authors:Burschowsky, D, vanEerde, A, Okvist, M, Kienhofer, A, Kast, P, Hilvert, D, Krengel, U.
Deposit date:2013-02-22
Release date:2014-04-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Electrostatic Transition State Stabilization Rather Than Reactant Destabilization Provides the Chemical Basis for Efficient Chorismate Mutase Catalysis.
Proc.Natl.Acad.Sci.USA, 111, 2014
5A9Q
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BU of 5a9q by Molmil
Human nuclear pore complex
Descriptor: NUCLEAR PORE COMPLEX PROTEIN NUP107, NUCLEAR PORE COMPLEX PROTEIN NUP133, NUCLEAR PORE COMPLEX PROTEIN NUP155, ...
Authors:von Appen, A, Kosinski, J, Sparks, L, Ori, A, DiGuilio, A, Vollmer, B, Mackmull, M, Banterle, N, Parca, L, Kastritis, P, Buczak, K, Mosalaganti, S, Hagen, W, Andres-Pons, A, Lemke, E.A, Bork, P, Antonin, W, Glavy, J.S, Bui, K.H, Beck, M.
Deposit date:2015-07-22
Release date:2015-09-30
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (23 Å)
Cite:In Situ Structural Analysis of the Human Nuclear Pore Complex
Nature, 526, 2015
7QCO
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BU of 7qco by Molmil
The structure of Photosystem I tetramer from Chroococcidiopsis TS-821, a thermophilic, unicellular, non-heterocyst-forming cyanobacterium
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, BETA-CAROTENE, CHLOROPHYLL A, ...
Authors:Semchonok, D.A, Mondal, J, Cooper, J.C, Schlum, K, Li, M, Amin, M, Sorzano, C.O.S, Ramirez-Aportela, E, Kastritis, P.L, Boekema, E.J, Guskov, A, Bruce, B.D.
Deposit date:2021-11-24
Release date:2022-04-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structure of a tetrameric photosystem I from Chroococcidiopsis TS-821, a thermophilic, unicellular, non-heterocyst-forming cyanobacterium.
Plant Commun., 3, 2022
7Q5R
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BU of 7q5r by Molmil
Protein community member pyruvate dehydrogenase complex E2 core from C. thermophilum
Descriptor: Acetyltransferase component of pyruvate dehydrogenase complex
Authors:Chojnowski, G, Skalidis, I, Kyrilis, F.L, Tueting, C, Hamdi, F, Kastritis, P.L.
Deposit date:2021-11-04
Release date:2022-02-02
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:Cryo-EM and artificial intelligence visualize endogenous protein community members.
Structure, 30, 2022
7Q5Q
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BU of 7q5q by Molmil
Protein community member oxoglutarate dehydrogenase complex E2 core from C. thermophilum
Descriptor: Dihydrolipoyllysine-residue succinyltransferase
Authors:Chojnowski, G, Skalidis, I, Kyrilis, F.L, Tueting, C, Hamdi, F, Kastritis, P.L.
Deposit date:2021-11-04
Release date:2022-02-02
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (4.38 Å)
Cite:Cryo-EM and artificial intelligence visualize endogenous protein community members.
Structure, 30, 2022
8A5T
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BU of 8a5t by Molmil
Capsid structure of the L-A helper virus from native viral communities
Descriptor: Major capsid protein
Authors:Schmidt, L, Tueting, C, Stubbs, M.T, Kastritis, P.L.
Deposit date:2022-06-16
Release date:2023-12-20
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.78 Å)
Cite:Delineating organizational principles of the endogenous L-A virus by cryo-EM and computational analysis of native cell extracts.
Commun Biol, 7, 2024
7OTT
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BU of 7ott by Molmil
Metabolon-embedded pyruvate dehydrogenase complex E2 core at near-atomic resolution
Descriptor: Acetyltransferase component of pyruvate dehydrogenase complex
Authors:Tueting, C, Kastritis, P.L.
Deposit date:2021-06-10
Release date:2021-12-01
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:Cryo-EM snapshots of a native lysate provide structural insights into a metabolon-embedded transacetylase reaction.
Nat Commun, 12, 2021
7Q5S
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BU of 7q5s by Molmil
Protein community member fatty acid synthase complex from C. thermophilum
Descriptor: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase, 3-oxoacyl-[acyl-carrier-protein] reductase
Authors:Chojnowski, G, Skalidis, I, Kyrilis, F.L, Tueting, C, Hamdi, F, Kastritis, P.L.
Deposit date:2021-11-04
Release date:2022-02-02
Last modified:2023-12-13
Method:ELECTRON MICROSCOPY (4.47 Å)
Cite:Cryo-EM and artificial intelligence visualize endogenous protein community members.
Structure, 30, 2022
6SHT
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BU of 6sht by Molmil
Molecular structure of mouse apoferritin resolved at 2.7 Angstroms with the Glacios cryo-microscope
Descriptor: FE (III) ION, Ferritin heavy chain, MAGNESIUM ION
Authors:Hamdi, F, Tueting, C, Semchonok, D, Kyrilis, F, Meister, A, Skalidis, I, Schmidt, L, Parthier, C, Stubbs, M.T, Kastritis, P.L.
Deposit date:2019-08-08
Release date:2020-05-13
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.73 Å)
Cite:2.7 angstrom cryo-EM structure of vitrified M. musculus H-chain apoferritin from a compact 200 keV cryo-microscope.
Plos One, 15, 2020
8PE8
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BU of 8pe8 by Molmil
Symmetry expanded D7 local refined map of mitochondrial heat-shock protein 60-like protein from Chaetomium thermophilum
Descriptor: Mitochondrial heat shock protein 60-like protein
Authors:Semchonok, D.A, Kyrilis, F.L, Hamdi, F, Kastritis, P.L.
Deposit date:2023-06-13
Release date:2023-08-16
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Symmetry expanded D7, locally refined cryo-EM map of mitochondrial heat shock protein 60-like protein Chaetomium thermophilum.
To Be Published
8OIU
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BU of 8oiu by Molmil
Cryo-EM reconstruction of the native 24-mer E2o core of the 2-oxoglutarate dehydrogenase complex of C. thermophilum at 3.35 A resolution
Descriptor: Dihydrolipoyllysine-residue succinyltransferase
Authors:Skalidis, I, Tueting, C, Kyrilis, F.L, Hamdi, F, Kastritis, P.L.
Deposit date:2023-03-23
Release date:2023-05-31
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Structural analysis of an endogenous 4-megadalton succinyl-CoA-generating metabolon.
Commun Biol, 6, 2023

 

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