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PDB: 534 件

5F51
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Structure of B. abortus WrbA-related protein A (apo)
分子名称: NAD(P)H dehydrogenase (quinone), SULFATE ION
著者Herrou, J, Czyz, D, Willett, J.W, Kim, H.S, Kim, Y, Crosson, S.
登録日2015-12-03
公開日2016-03-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献WrpA Is an Atypical Flavodoxin Family Protein under Regulatory Control of the Brucella abortus General Stress Response System.
J.Bacteriol., 198, 2016
7V8U
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Crystal structure of PsEst3 wild-type
分子名称: Esterase, NITROBENZENE, SULFATE ION
著者Son, J, Kim, H, Kim, H.W.
登録日2021-08-23
公開日2022-08-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural and biochemical insights into PsEst3, a new GHSR-type esterase obtained from Paenibacillus sp. R4.
Iucrj, 10, 2023
7V8X
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Crystal structure of PsEst3 complexed with Phenylmethylsulfonyl fluoride (PMSF)
分子名称: esterase, phenylmethanesulfonic acid
著者Son, J, Kim, H, Kim, H.W.
登録日2021-08-23
公開日2022-08-31
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Structural and biochemical insights into PsEst3, a new GHSR-type esterase obtained from Paenibacillus sp. R4.
Iucrj, 10, 2023
7V8V
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BU of 7v8v by Molmil
Crystal structure of PsEst3 S128A mutant
分子名称: esterase
著者Son, J, Kim, H, Kim, H.W.
登録日2021-08-23
公開日2022-08-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural and biochemical insights into PsEst3, a new GHSR-type esterase obtained from Paenibacillus sp. R4.
Iucrj, 10, 2023
7V8W
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BU of 7v8w by Molmil
Crystal structure of PsEst3 S128A variant complexed with malonate
分子名称: 1,2-ETHANEDIOL, ACETATE ION, MALONIC ACID, ...
著者Son, J, Kim, H, Kim, H.W.
登録日2021-08-23
公開日2022-08-31
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and biochemical insights into PsEst3, a new GHSR-type esterase obtained from Paenibacillus sp. R4.
Iucrj, 10, 2023
5Y86
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Crystal structure of kinase
分子名称: 1,2-ETHANEDIOL, 7-METHOXY-1-METHYL-9H-BETA-CARBOLINE, Dual specificity tyrosine-phosphorylation-regulated kinase 3, ...
著者Kim, K.L, Cha, J.S, Cho, Y.S, Kim, H.Y, Chang, N.P, Cho, H.S.
登録日2017-08-18
公開日2018-05-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of Human Dual-Specificity Tyrosine-Regulated Kinase 3 Reveals New Structural Features and Insights into its Auto-phosphorylation
J. Mol. Biol., 430, 2018
4G4V
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BU of 4g4v by Molmil
Crystal structure of peptidoglycan-associated lipoprotein from Acinetobacter baumannii
分子名称: 2,6-DIAMINOPIMELIC ACID, Peptidoglycan-associated lipoprotein
著者Lee, W.C, Song, J.H, Park, J.S, Kim, H.Y.
登録日2012-07-16
公開日2013-07-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Enantiomer-dependent amino acid binding affinity of OmpA-like domains from Acinetobacter baumannii peptidoglycan-associated lipoprotein and OmpA
To be Published
4G4Y
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Crystal structure of OmpA peptidoglycan-binding domain from Acinetobacter baumannii
分子名称: ALANINE, Outer membrane protein Omp38, SULFATE ION
著者Lee, W.C, Song, J.H, Park, J.S, Kim, H.Y.
登録日2012-07-16
公開日2013-07-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Enantiomer-dependent amino acid binding affinity of OmpA-like domains from Acinetobacter baumannii peptidoglycan-associated lipoprotein and OmpA
To be Published
7WWP
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BU of 7wwp by Molmil
Crystal structure of human Npl4
分子名称: Nuclear protein localization protein 4 homolog, ZINC ION
著者Nguyen, T.Q, Le, L.T.M, Kim, D.H, Ko, K.S, Lee, H.T, Nguyen, Y.T.K, Kim, H.S, Han, B.W, Kang, W, Yang, J.K.
登録日2022-02-14
公開日2022-09-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Structural basis for the interaction between human Npl4 and Npl4-binding motif of human Ufd1.
Structure, 30, 2022
4G4X
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Crystal structure of peptidoglycan-associated lipoprotein from Acinetobacter baumannii
分子名称: D-ALANINE, GLYCEROL, Peptidoglycan-associated lipoprotein, ...
著者Lee, W.C, Song, J.H, Park, J.S, Kim, H.Y.
登録日2012-07-16
公開日2013-07-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Enantiomer-dependent amino acid binding affinity of OmpA-like domains from Acinetobacter baumannii peptidoglycan-associated lipoprotein and OmpA
To be Published
4G88
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BU of 4g88 by Molmil
Crystal structure of OmpA peptidoglycan-binding domain from Acinetobacter baumannii
分子名称: 2,6-DIAMINOPIMELIC ACID, Outer membrane protein Omp38, S,R MESO-TARTARIC ACID
著者Lee, W.C, Song, J.H, Park, J.S, Kim, H.Y.
登録日2012-07-22
公開日2013-07-24
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Enantiomer-dependent amino acid binding affinity of OmpA-like domains from Acinetobacter baumannii peptidoglycan-associated lipoprotein and OmpA
to be published
4G4Z
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BU of 4g4z by Molmil
Crystal structure of OmpA peptidoglycan-binding domain from Acinetobacter baumannii
分子名称: D-ALANINE, Outer membrane protein Omp38, SULFATE ION
著者Lee, W.C, Song, J.H, Park, J.S, Kim, H.Y.
登録日2012-07-16
公開日2013-07-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Enantiomer-dependent amino acid binding affinity of OmpA-like domains from Acinetobacter baumannii peptidoglycan-associated lipoprotein and OmpA
To be Published
7WWQ
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BU of 7wwq by Molmil
Crystal structure of human Ufd1-Npl4 complex
分子名称: Nuclear protein localization protein 4 homolog, Ubiquitin recognition factor in ER-associated degradation protein 1
著者Nguyen, T.Q, Le, L.T.M, Kim, D.H, Ko, K.S, Lee, H.T, Nguyen, Y.T.K, Kim, H.S, Han, B.W, Kang, W, Yang, J.K.
登録日2022-02-14
公開日2022-09-21
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献Structural basis for the interaction between human Npl4 and Npl4-binding motif of human Ufd1.
Structure, 30, 2022
3INA
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BU of 3ina by Molmil
Crystal structure of heparin lyase I H151A mutant complexed with a dodecasaccharide heparin
分子名称: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-3,6-di-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid, CALCIUM ION, Heparin lyase I
著者Han, Y.H, Ryu, K.S, Kim, H.Y, Jeon, Y.H.
登録日2009-08-12
公開日2009-09-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural snapshots of heparin depolymerization by heparin lyase I
J.Biol.Chem., 284, 2009
4G4W
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BU of 4g4w by Molmil
Crystal structure of peptidoglycan-associated lipoprotein from Acinetobacter baumannii
分子名称: ALANINE, GLYCEROL, Peptidoglycan-associated lipoprotein, ...
著者Lee, W.C, Song, J.H, Park, J.S, Kim, H.Y.
登録日2012-07-16
公開日2013-07-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Enantiomer-dependent amino acid binding affinity of OmpA-like domains from Acinetobacter baumannii peptidoglycan-associated lipoprotein and OmpA
to be published
3IN9
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BU of 3in9 by Molmil
Crystal structure of heparin lyase I complexed with disaccharide heparin
分子名称: 4-deoxy-2-O-sulfo-alpha-L-threo-hex-4-enopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, CALCIUM ION, Heparin lyase I
著者Han, Y.H, Ryu, K.S, Kim, H.Y, Jeon, Y.H.
登録日2009-08-12
公開日2009-09-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural snapshots of heparin depolymerization by heparin lyase I
J.Biol.Chem., 284, 2009
5XTF
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BU of 5xtf by Molmil
Crystal structure of the cis-dihydrodiol naphthalene dehydrogenase NahB from Pseudomonas sp. MC1
分子名称: 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase
著者Park, A.K, Kim, H.-W.
登録日2017-06-19
公開日2017-08-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.095 Å)
主引用文献Crystal structure of cis-dihydrodiol naphthalene dehydrogenase (NahB) from Pseudomonas sp. MC1: Insights into the early binding process of the substrate
Biochem. Biophys. Res. Commun., 491, 2017
1Q1Y
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BU of 1q1y by Molmil
Crystal Structures of Peptide Deformylase from Staphylococcus aureus Complexed with Actinonin
分子名称: ACTINONIN, Peptide deformylase, ZINC ION
著者Yoon, H.J, Lee, S.K, Kim, H.L, Kim, H.W, Kim, H.W, Lee, J.Y, Mikami, B, Suh, S.W.
登録日2003-07-23
公開日2004-07-23
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of peptide deformylase from Staphylococcus aureus in complex with actinonin, a naturally occurring antibacterial agent
Proteins, 57, 2004
8HSI
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BU of 8hsi by Molmil
Cryo-EM structure of human TMEM87A, PE-bound
分子名称: (1S)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(octadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
著者Han, A, Kim, H.M.
登録日2022-12-19
公開日2023-12-27
最終更新日2024-09-18
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献GolpHCat (TMEM87A), a unique voltage-dependent cation channel in Golgi apparatus, contributes to Golgi-pH maintenance and hippocampus-dependent memory.
Nat Commun, 15, 2024
8HTT
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BU of 8htt by Molmil
Cryo-EM structure of human TMEM87A, gluconate-bound
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, D-gluconic acid, Transmembrane protein 87A,EGFP, ...
著者Han, A, Kim, H.M.
登録日2022-12-21
公開日2023-12-27
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献GolpHCat (TMEM87A), a unique voltage-dependent cation channel in Golgi apparatus, contributes to Golgi-pH maintenance and hippocampus-dependent memory.
Nat Commun, 15, 2024
5FA9
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BU of 5fa9 by Molmil
Bifunctional Methionine Sulfoxide Reductase AB (MsrAB) from Treponema denticola
分子名称: (4S,5S)-1,2-DITHIANE-4,5-DIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Peptide methionine sulfoxide reductase MsrA
著者Han, A, Son, J, Kim, H.-Y, Hwang, K.Y.
登録日2015-12-11
公開日2016-09-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献Essential Role of the Linker Region in the Higher Catalytic Efficiency of a Bifunctional MsrA-MsrB Fusion Protein
Biochemistry, 55, 2016
8YBE
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BU of 8ybe by Molmil
Cryo-EM structure of Maltose Binding Protein
分子名称: Maltose/maltodextrin-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Yoo, Y, Park, K, Kim, H.
登録日2024-02-13
公開日2024-03-06
実験手法ELECTRON MICROSCOPY (2.3 Å)
主引用文献Atomic resolution structure of MBP using Cryo-EM
To Be Published
4M6R
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BU of 4m6r by Molmil
Structural and biochemical basis for the inhibition of cell death by APIP, a methionine salvage enzyme
分子名称: Methylthioribulose-1-phosphate dehydratase, ZINC ION
著者Kang, W, Hong, S.H, Lee, H.M, Kim, N.Y, Lim, Y.C, Le, L.T.M, Lim, B, Kim, H.C, Kim, T.Y, Ashida, H, Yokota, A, Hah, S.S, Chun, K.H, Jung, Y.K, Yang, J.K.
登録日2013-08-10
公開日2014-01-29
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and biochemical basis for the inhibition of cell death by APIP, a methionine salvage enzyme.
Proc.Natl.Acad.Sci.USA, 111, 2014
4JJT
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BU of 4jjt by Molmil
The crystal structure of enoyl-CoA hydratase from Mycobacterium tuberculosis H37Rv
分子名称: ACETATE ION, Enoyl-CoA hydratase, GLYCEROL
著者Tan, K, Holowicki, J, Endres, M, Kim, C.-Y, Kim, H, Hung, L.-W, Terwilliger, T.C, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
登録日2013-03-08
公開日2013-03-27
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.496 Å)
主引用文献The crystal structure of enoyl-CoA hydratase from Mycobacterium tuberculosis H37Rv
To be Published
5G1D
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BU of 5g1d by Molmil
The complex structure of syntenin-1 PDZ domain with c-terminal extension
分子名称: SYNDECAN-4, SYNTENIN-1
著者Lee, I, Kim, H, Yun, J.H, Lee, W.
登録日2016-03-25
公開日2016-11-23
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献New Structural Insight of C-Terminal Region of Syntenin-1, Enhancing the Molecular Dimerization and Inhibitory Function Related on Syndecan-4 Signaling.
Sci.Rep., 6, 2016

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件を2024-11-06に公開中

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