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PDB: 90 results

1R9W
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Crystal Structure of the DNA-binding domain of the human papillomavirus type 18 (HPV-18) replication initiation protein E1
Descriptor: Replication protein E1
Authors:Auster, A.S, Joshua-Tor, L.
Deposit date:2003-10-31
Release date:2003-11-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The DNA-binding domain of human papillomavirus type 18 E1. Crystal structure, dimerization, and DNA binding.
J.Biol.Chem., 279, 2004
3BTS
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BU of 3bts by Molmil
Crystal structure of a ternary complex of the transcriptional repressor Gal80p (Gal80S0 [G301R]) and the acidic activation domain of Gal4p (aa 854-874) from Saccharomyces cerevisiae with NAD
Descriptor: Galactose/lactose metabolism regulatory protein GAL80, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Regulatory protein GAL4
Authors:Kumar, P.R, Joshua-Tor, L.
Deposit date:2007-12-30
Release date:2008-03-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:NADP regulates the yeast GAL induction system.
Science, 319, 2008
4O9D
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Structure of Dos1 propeller
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Rik1-associated factor 1
Authors:Kuscu, C, Schalch, T, Joshua-Tor, L.
Deposit date:2014-01-02
Release date:2014-01-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:CRL4-like Clr4 complex in Schizosaccharomyces pombe depends on an exposed surface of Dos1 for heterochromatin silencing.
Proc.Natl.Acad.Sci.USA, 111, 2014
4PMW
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Structure of mouse Dis3L2 in complex with oligoU RNA substrate
Descriptor: DIS3-like exonuclease 2, MAGNESIUM ION, U-U-U-U-U-U-U-U-U-U-U-U-U-U
Authors:Faehnle, C.R, Walleshauser, J, Joshua-Tor, L.
Deposit date:2014-05-22
Release date:2014-07-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Mechanism of Dis3l2 substrate recognition in the Lin28-let-7 pathway.
Nature, 514, 2014
4KRE
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Structure of Human Argonaute-1 bound to endogenous Sf9 RNA
Descriptor: Protein argonaute-1, RNA (5'-R(P*AP*AP*UP*AP*UP*UP*AP*AP*A*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3')
Authors:Faehnle, C.R, Elkayam, E, Joshua-Tor, L.
Deposit date:2013-05-16
Release date:2013-06-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.754 Å)
Cite:The making of a slicer: activation of human argonaute-1.
Cell Rep, 3, 2013
4KRF
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Structure of Human Argonaute-1 let-7 complex
Descriptor: Protein argonaute-1, RNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*UP*U)-3')
Authors:Faehnle, C.R, Elkayam, E, Joshua-Tor, L.
Deposit date:2013-05-16
Release date:2013-06-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:The making of a slicer: activation of human argonaute-1.
Cell Rep, 3, 2013
3G7L
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Chromodomain of Chp1 in complex with Histone H3K9me3 peptide
Descriptor: ACETIC ACID, Chromo domain-containing protein 1, Histone H3.1/H3.2, ...
Authors:Schalch, T, Joshua-Tor, L.
Deposit date:2009-02-10
Release date:2009-04-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:High-affinity binding of Chp1 chromodomain to K9 methylated histone H3 is required to establish centromeric heterochromatin
Mol.Cell, 34, 2009
6OUC
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Asymmetric focsued reconstruction of human norovirus GII.2 Snow Mountain Virus strain VLP asymmetric unit in T=1 symmetry
Descriptor: Viral protein 1, ZINC ION
Authors:Jung, J, Grant, T, Thomas, D.R, Diehnelt, C.W, Grigorieff, N, Joshua-Tor, L.
Deposit date:2019-05-04
Release date:2019-06-26
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:High-resolution cryo-EM structures of outbreak strain human norovirus shells reveal size variations.
Proc.Natl.Acad.Sci.USA, 116, 2019
6OUU
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Symmetric reconstruction of human norovirus GII.4 Minerva strain VLP in T=4 symmetry
Descriptor: Major capsid protein
Authors:Jung, J, Grant, T, Thomas, D.R, Diehnelt, C.W, Grigorieff, N, Joshua-Tor, L.
Deposit date:2019-05-05
Release date:2019-06-26
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:High-resolution cryo-EM structures of outbreak strain human norovirus shells reveal size variations.
Proc.Natl.Acad.Sci.USA, 116, 2019
6OTF
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Symmetric reconstruction of human norovirus GII.2 Snow Mountain Virus Strain VLP in T=3 symmetry
Descriptor: Viral protein 1, ZINC ION
Authors:Jung, J, Grant, T, Thomas, D.R, Diehnelt, C.W, Grigorieff, N, Joshua-Tor, L.
Deposit date:2019-05-03
Release date:2019-06-26
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:High-resolution cryo-EM structures of outbreak strain human norovirus shells reveal size variations.
Proc.Natl.Acad.Sci.USA, 116, 2019
3V5R
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Crystal structure of the unliganded form of Gal3p
Descriptor: Protein GAL3, SULFATE ION
Authors:Lavy, T, Kumar, P.R, He, H, Joshua-Tor, L.
Deposit date:2011-12-16
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:The Gal3p transducer of the GAL regulon interacts with the Gal80p repressor in its ligand-induced closed conformation.
Genes Dev., 26, 2012
3V2U
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Crystal structure of the yeast GAL regulon complex of the repressor, Gal80p, and the transducer, Gal3p, with galactose and ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, Galactose/lactose metabolism regulatory protein GAL80, ...
Authors:Lavy, T, Kumar, P.R, He, H, Joshua-Tor, L.
Deposit date:2011-12-12
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.105 Å)
Cite:The Gal3p transducer of the GAL regulon interacts with the Gal80p repressor in its ligand-induced closed conformation.
Genes Dev., 26, 2012
3TIX
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BU of 3tix by Molmil
Crystal structure of the Chp1-Tas3 complex core
Descriptor: CHLORIDE ION, Chromo domain-containing protein 1, POTASSIUM ION, ...
Authors:Schalch, T, Joshua-Tor, L.
Deposit date:2011-08-22
Release date:2011-11-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9001 Å)
Cite:The Chp1-Tas3 core is a multifunctional platform critical for gene silencing by RITS.
Nat.Struct.Mol.Biol., 18, 2011
4GGJ
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BU of 4ggj by Molmil
Crystal structure of Zucchini from mouse (mZuc / PLD6 / MitoPLD)
Descriptor: Mitochondrial cardiolipin hydrolase, ZINC ION
Authors:Ipsaro, J.J, Haase, A.D, Hannon, G.J, Joshua-Tor, L.
Deposit date:2012-08-06
Release date:2012-10-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The structural biochemistry of Zucchini implicates it as a nuclease in piRNA biogenesis.
Nature, 491, 2012
4F3T
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BU of 4f3t by Molmil
Human Argonaute-2 - miR-20a complex
Descriptor: PHENOL, Protein argonaute-2, RNA (5'-R(P*UP*AP*AP*AP*GP*UP*GP*CP*UP*UP*AP*UP*AP*GP*UP*G*CP*AP*GP*G)-3')
Authors:Elkayam, E, Kuhn, C.-D, Tocilj, A, Joshua-Tor, L.
Deposit date:2012-05-09
Release date:2012-05-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The Structure of Human Argonaute-2 in Complex with miR-20a.
Cell(Cambridge,Mass.), 150, 2012
1KQJ
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Crystal Structure of a Mutant of MutY Catalytic Domain
Descriptor: A/G-SPECIFIC ADENINE GLYCOSYLASE, GLYCEROL, IRON/SULFUR CLUSTER, ...
Authors:Messick, T.E, Chmiel, N.H, Golinelli, M.P, David, S.S, Joshua-Tor, L.
Deposit date:2002-01-06
Release date:2002-04-10
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Noncysteinyl coordination to the [4Fe-4S]2+ cluster of the DNA repair adenine glycosylase MutY introduced via site-directed mutagenesis. Structural characterization of an unusual histidinyl-coordinated cluster.
Biochemistry, 41, 2002
1KOU
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Crystal Structure of the Photoactive Yellow Protein Reconstituted with Caffeic Acid at 1.16 A Resolution
Descriptor: CAFFEIC ACID, N-BUTANE, PHOTOACTIVE YELLOW PROTEIN
Authors:van Aalten, D.M.F, Crielaard, W, Hellingwerf, K.J, Joshua-Tor, L.
Deposit date:2001-12-22
Release date:2002-04-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Structure of the photoactive yellow protein reconstituted with caffeic acid at 1.16 A resolution.
Acta Crystallogr.,Sect.D, 58, 2002
1KSY
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Crystal Structures of Two Intermediates in the Assembly of the Papillomavirus Replication Initiation Complex
Descriptor: E1 Recognition Sequence, Strand 1, Strand 2, ...
Authors:Enemark, E.J, Stenlund, A, Joshua-Tor, L.
Deposit date:2002-01-14
Release date:2002-03-15
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Crystal structures of two intermediates in the assembly of the papillomavirus replication initiation complex.
EMBO J., 21, 2002
1KSX
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Crystal Structures of Two Intermediates in the Assembly of the Papillomavirus Replication Initiation Complex
Descriptor: E1 Recognition Sequence, REPLICATION PROTEIN E1
Authors:Enemark, E.J, Stenlund, A, Joshua-Tor, L.
Deposit date:2002-01-14
Release date:2002-03-15
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structures of two intermediates in the assembly of the papillomavirus replication initiation complex.
EMBO J., 21, 2002
4GGK
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Crystal structure of Zucchini from mouse (mZuc / PLD6 / MitoPLD) bound to tungstate
Descriptor: Mitochondrial cardiolipin hydrolase, TUNGSTATE(VI)ION, ZINC ION
Authors:Ipsaro, J.J, Haase, A.D, Hannon, G.J, Joshua-Tor, L.
Deposit date:2012-08-06
Release date:2012-10-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structural biochemistry of Zucchini implicates it as a nuclease in piRNA biogenesis.
Nature, 491, 2012
1CAD
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BU of 1cad by Molmil
X-RAY CRYSTAL STRUCTURES OF THE OXIDIZED AND REDUCED FORMS OF THE RUBREDOXIN FROM THE MARINE HYPERTHERMOPHILIC ARCHAEBACTERIUM PYROCOCCUS FURIOSUS
Descriptor: FE (III) ION, RUBREDOXIN
Authors:Day, M.W, Hsu, B.T, Joshua-Tor, L, Park, J.B, Zhou, Z.H, Adams, M.W.W, Rees, D.C.
Deposit date:1992-05-18
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystal structures of the oxidized and reduced forms of the rubredoxin from the marine hyperthermophilic archaebacterium Pyrococcus furiosus.
Protein Sci., 1, 1992
1CAA
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BU of 1caa by Molmil
X-RAY CRYSTAL STRUCTURES OF THE OXIDIZED AND REDUCED FORMS OF THE RUBREDOXIN FROM THE MARINE HYPERTHERMOPHILIC ARCHAEBACTERIUM PYROCOCCUS FURIOSUS
Descriptor: FE (III) ION, RUBREDOXIN
Authors:Day, M.W, Hsu, B.T, Joshua-Tor, L, Park, J.B, Zhou, Z.H, Adams, M.W.W, Rees, D.C.
Deposit date:1992-05-18
Release date:1993-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:X-ray crystal structures of the oxidized and reduced forms of the rubredoxin from the marine hyperthermophilic archaebacterium Pyrococcus furiosus.
Protein Sci., 1, 1992
1CB5
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HUMAN BLEOMYCIN HYDROLASE.
Descriptor: BLEOMYCIN HYDROLASE
Authors:O'Farrell, P.A, Gonzalez, F, Zheng, W, Johnston, S.A, Joshua-Tor, L.
Deposit date:1999-03-01
Release date:2000-03-01
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Crystal structure of human bleomycin hydrolase, a self-compartmentalizing cysteine protease.
Structure Fold.Des., 7, 1999
1Z25
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Structure of P.furiosus Argonaute with bound Mn2+
Descriptor: Argonaute, MANGANESE (II) ION
Authors:Rivas, F.V, Tolia, N.H, Song, J.J, Aragon, J.P, Liu, J, Hannon, G.J, Joshua-Tor, L.
Deposit date:2005-03-07
Release date:2005-04-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Purified Argonaute2 and an siRNA form recombinant human RISC.
Nat.Struct.Mol.Biol., 12, 2005
1Z26
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Structure of Pyrococcus furiosus Argonaute with bound tungstate
Descriptor: Argonaute, TUNGSTATE(VI)ION
Authors:Rivas, F.V, Tolia, N.H, Song, J.J, Aragon, J.P, Liu, J, Hannon, G.J, Joshua-Tor, L.
Deposit date:2005-03-07
Release date:2005-04-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Purified Argonaute2 and an siRNA form recombinant human RISC.
Nat.Struct.Mol.Biol., 12, 2005

226707

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