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PDB: 91 results

7K3M
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Crystal Structure of the Beta Lactamase Class D from Chitinophaga pinensis by Serial Crystallography
Descriptor: Beta-lactamase
Authors:Kim, Y, Sherrell, D.A, Johnson, J, Lavens, A, Maltseva, N, Endres, M, Babnigg, G, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-09-11
Release date:2020-09-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of the Beta Lactamase Class D from Chitinophaga pinensis by Serial Crystallography
To Be Published
5FMO
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Crystal structure and proteomics analysis of empty virus like particles of Cowpea mosaic virus
Descriptor: EMPTY VIRUS LIKE PARTICLES OF COWPEA MOSAIC VIRUS
Authors:Huynh, N, Hesketh, E.L, Saxena, P, Meshcheriakova, Y, Ku, Y.C, Hoang, L, Johnson, J.E, Ranson, N.A, Lomonossoff, G.P, Reddy, V.S.
Deposit date:2015-11-07
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure and Proteomics Analysis of Empty Virus-Like Particles of Cowpea Mosaic Virus.
Structure, 24, 2016
3R0R
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BU of 3r0r by Molmil
The 2.3 A structure of porcine circovirus 2
Descriptor: Porcine circovirus 2 (PCV2) capsid protein, SULFATE ION
Authors:Khayat, R, Speir, J.A, Johnson, J.E.
Deposit date:2011-03-08
Release date:2011-06-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The 2.3-angstrom structure of porcine circovirus 2.
J.Virol., 85, 2011
4AXP
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BU of 4axp by Molmil
NMR structure of Hsp12, a protein induced by and required for dietary restriction-induced lifespan extension in yeast.
Descriptor: 12 KDA HEAT SHOCK PROTEIN
Authors:Herbert, A.P, Riesen, M, Bloxam, L, Kosmidou, E, Wareing, B.M, Johnson, J.R, Phelan, M.M, Pennington, S.R, Lian, L.Y, Morgan, A.
Deposit date:2012-06-13
Release date:2012-08-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Structure of Hsp12, a Protein Induced by and Required for Dietary Restriction-Induced Lifespan Extension in Yeast.
Plos One, 7, 2012
3QPR
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BU of 3qpr by Molmil
HK97 Prohead I encapsidating inactive virally encoded protease
Descriptor: Major capsid protein
Authors:Huang, R.K, Khayat, R, Lee, K.K, Gertsman, I, Duda, R.L, Hendrix, R.W, Johnson, J.E.
Deposit date:2011-02-14
Release date:2011-03-30
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (5.2 Å)
Cite:The Prohead-I structure of bacteriophage HK97: implications for scaffold-mediated control of particle assembly and maturation.
J.Mol.Biol., 408, 2011
1NOV
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BU of 1nov by Molmil
NODAMURA VIRUS
Descriptor: NODAMURA VIRUS COAT PROTEINS
Authors:Natarajan, P, Johnson, J.E.
Deposit date:1997-09-16
Release date:1998-01-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Resolution of space-group ambiguity and structure determination of nodamura virus to 3.3 A resolution from pseudo-R32 (monoclinic) crystals.
Acta Crystallogr.,Sect.D, 53, 1997
1OHG
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BU of 1ohg by Molmil
STRUCTURE OF THE DSDNA BACTERIOPHAGE HK97 MATURE EMPTY CAPSID
Descriptor: CHLORIDE ION, MAJOR CAPSID PROTEIN, SULFATE ION
Authors:Helgstrand, C, Wikoff, W.R, Duda, R.L, Hendrix, R.W, Johnson, J.E, Liljas, L.
Deposit date:2003-05-26
Release date:2003-12-11
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:The Refined Structure of a Protein Catenane: The Hk97 Bacteriophage Capsid at 3.44A Resolution
J.Mol.Biol., 334, 2003
1F8V
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BU of 1f8v by Molmil
THE STRUCTURE OF PARIACOTO VIRUS REVEALS A DODECAHEDRAL CAGE OF DUPLEX RNA
Descriptor: CALCIUM ION, MATURE CAPSID PROTEIN BETA, MATURE CAPSID PROTEIN GAMMA, ...
Authors:Tang, L, Johnson, K.N, Ball, L.A, Lin, T, Yeager, M, Johnson, J.E.
Deposit date:2000-07-05
Release date:2000-12-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structure of pariacoto virus reveals a dodecahedral cage of duplex RNA.
Nat.Struct.Biol., 8, 2001
1OHF
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The refined structure of Nudaurelia capensis omega virus
Descriptor: MAGNESIUM ION, p70
Authors:Helgstrand, C, Munshi, S, Johnson, J.E, Liljas, L.
Deposit date:2003-05-26
Release date:2004-02-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Refined Structure of Nudaurelia Capensis Omega Virus Reveals Control Elements for a T = 4 Capsid Maturation
Virology, 318, 2004
1IF0
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BU of 1if0 by Molmil
PSEUDO-ATOMIC MODEL OF BACTERIOPHAGE HK97 PROCAPSID (PROHEAD II)
Descriptor: PROTEIN (MAJOR CAPSID PROTEIN GP5)
Authors:Conway, J.F, Wikoff, W.R, Cheng, N, Duda, R.L, Hendrix, R.W, Johnson, J.E, Steven, A.C.
Deposit date:2001-04-11
Release date:2001-05-02
Last modified:2024-02-07
Method:ELECTRON MICROSCOPY (12 Å)
Cite:Virus maturation involving large subunit rotations and local refolding.
Science, 292, 2001
3F2E
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BU of 3f2e by Molmil
Crystal structure of Yellowstone SIRV coat protein C-terminus
Descriptor: CITRIC ACID, SIRV coat protein
Authors:Taurog, R.E, Szymczyna, B.R, Williamson, J.R, Johnson, J.E.
Deposit date:2008-10-29
Release date:2009-04-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.668 Å)
Cite:Synergy of NMR, computation, and X-ray crystallography for structural biology.
Structure, 17, 2009
1CWP
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BU of 1cwp by Molmil
STRUCTURES OF THE NATIVE AND SWOLLEN FORMS OF COWPEA CHLOROTIC MOTTLE VIRUS DETERMINED BY X-RAY CRYSTALLOGRAPHY AND CRYO-ELECTRON MICROSCOPY
Descriptor: Coat protein, RNA (5'-R(*AP*U)-3'), RNA (5'-R(*AP*UP*AP*U)-3')
Authors:Speir, J.A, Johnson, J.E, Munshi, S, Wang, G, Timothy, S, Baker, T.S.
Deposit date:1995-05-22
Release date:1995-05-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structures of the native and swollen forms of cowpea chlorotic mottle virus determined by X-ray crystallography and cryo-electron microscopy.
Structure, 3, 1995
3IYH
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BU of 3iyh by Molmil
P22 procapsid coat protein structures reveal a novel mechanism for capsid maturation: Stability without auxiliary proteins or chemical cross-links
Descriptor: Coat protein
Authors:Parent, K.N, Khayat, R, Tu, L.H, Suhanovsky, M.M, Cortines, J.R, Teschke, C.M, Johnson, J.E, Baker, T.S.
Deposit date:2009-12-14
Release date:2010-03-31
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (8.2 Å)
Cite:P22 coat protein structures reveal a novel mechanism for capsid maturation: stability without auxiliary proteins or chemical crosslinks
Structure, 18, 2010
3IYI
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P22 expanded head coat protein structures reveal a novel mechanism for capsid maturation: Stability without auxiliary proteins or chemical cross-links
Descriptor: P22 coat protein in procapsid shells
Authors:Parent, K.N, Khayat, R, Tu, L.H, Suhanovsky, M.M, Cortines, J.R, Teschke, C.M, Johnson, J.E, Baker, T.S.
Deposit date:2009-12-14
Release date:2010-03-31
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (9.1 Å)
Cite:P22 coat protein structures reveal a novel mechanism for capsid maturation: stability without auxiliary proteins or chemical crosslinks
Structure, 18, 2010
1M1C
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Structure of the L-A virus
Descriptor: Major coat protein
Authors:Naitow, H, Tang, J, Canady, M, Wickner, R.B, Johnson, J.E.
Deposit date:2002-06-18
Release date:2002-10-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:L-A virus at 3.4 A resolution reveals particle architecture and mRNA decapping mechanism.
Nat.Struct.Biol., 9, 2002
1NY7
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BU of 1ny7 by Molmil
COWPEA MOSAIC VIRUS (CPMV)
Descriptor: COWPEA MOSAIC VIRUS, LARGE (L) SUBUNIT, SMALL (S) SUBUNIT
Authors:Lin, T, Chen, Z, Usha, R, Stauffacher, C.V, Dai, J.-B, Schmidt, T, Johnson, J.E.
Deposit date:2003-02-11
Release date:2003-03-18
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Refined Crystal Structure of Cowpea Mosaic Virus at 2.8A Resolution
Virology, 265, 1999
3BM9
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Discovery of Benzisoxazoles as Potent Inhibitors of Chaperone Hsp90
Descriptor: 4-bromo-6-(6-hydroxy-1,2-benzisoxazol-3-yl)benzene-1,3-diol, Heat shock protein HSP 90-alpha
Authors:Gopalsamy, A, Shi, M, Vogan, E.M, Golas, J, Jacob, J, Johnson, J, Lee, F, Nilakantan, R, Peterson, R, Svenson, K, Tam, M.S, Wen, Y, Chopra, R, Ellingboe, J, Arndt, K, Boschelli, F.
Deposit date:2007-12-12
Release date:2008-07-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Discovery of benzisoxazoles as potent inhibitors of chaperone heat shock protein 90.
J.Med.Chem., 51, 2008
2QQP
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Crystal Structure of Authentic Providence Virus
Descriptor: CALCIUM ION, RNA (5'-R(*UP*UP*UP*U)-3'), p81
Authors:Speir, J.A, Taylor, D.J, Johnson, J.E.
Deposit date:2007-07-26
Release date:2009-01-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Evolution in action: N and C termini of subunits in related T = 4 viruses exchange roles as molecular switches.
Structure, 18, 2010
1RNA
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BU of 1rna by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF AN RNA HELIX: [U(U-A)6A]2
Descriptor: RNA (5'-R(*UP*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*UP*AP*A)-3')
Authors:Dock-Bregeon, A.C, Chevrier, B, Podjarny, A, Johnson, J, De Bear, J.S, Gough, G.R, Gilham, P.T, Moras, D.
Deposit date:1990-02-01
Release date:1991-04-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystallographic structure of an RNA helix: [U(UA)6A]2.
J.Mol.Biol., 209, 1989
1PEH
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BU of 1peh by Molmil
NMR STRUCTURE OF THE MEMBRANE-BINDING DOMAIN OF CTP PHOSPHOCHOLINE CYTIDYLYLTRANSFERASE, 10 STRUCTURES
Descriptor: PEPNH1
Authors:Dunne, S.J, Cornell, R.B, Johnson, J.E, Glover, N.R, Tracey, A.S.
Deposit date:1996-06-10
Release date:1996-12-07
Last modified:2021-11-03
Method:SOLUTION NMR
Cite:Structure of the membrane binding domain of CTP:phosphocholine cytidylyltransferase.
Biochemistry, 35, 1996
1PGL
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BU of 1pgl by Molmil
BEAN POD MOTTLE VIRUS (BPMV), MIDDLE COMPONENT
Descriptor: 5'-R(*AP*GP*UP*CP*UP*C)-3', BEAN POD MOTTLE VIRUS LARGE (L) SUBUNIT, BEAN POD MOTTLE VIRUS SMALL (S) SUBUNIT
Authors:Lin, T, Cavarelli, J, Johnson, J.E.
Deposit date:2003-05-28
Release date:2003-11-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Evidence for assembly-dependent folding of protein and RNA in an icosahedral virus.
Virology, 314, 2003
1PGW
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BEAN POD MOTTLE VIRUS (BPMV), TOP COMPONENT
Descriptor: BEAN POD MOTTLE VIRUS LARGE (L) SUBUNIT, BEAN POD MOTTLE VIRUS SMALL (S) SUBUNIT
Authors:Lin, T, Cavarelli, J, Johnson, J.E.
Deposit date:2003-05-28
Release date:2003-11-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Evidence for assembly-dependent folding of protein and RNA in an icosahedral virus.
Virology, 314, 2003
1PEI
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NMR STRUCTURE OF THE MEMBRANE-BINDING DOMAIN OF CTP PHOSPHOCHOLINE CYTIDYLYLTRANSFERASE, 10 STRUCTURES
Descriptor: PEPC22
Authors:Dunne, S.J, Cornell, R.B, Johnson, J.E, Glover, N.R, Tracey, A.S.
Deposit date:1996-06-10
Release date:1996-12-07
Last modified:2018-03-14
Method:SOLUTION NMR
Cite:Structure of the membrane binding domain of CTP:phosphocholine cytidylyltransferase.
Biochemistry, 35, 1996
6BO3
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Structure Determination of A223, a turret protein in Sulfolobus turreted icosahedral virus, using an iterative hybrid approach
Descriptor: Uncharacterized protein
Authors:Sendamarai, A.K, Veesler, D, Fu, C.Y, Marceau, C, Larson, E.T, Johnson, J.E, Lawrence, C.M.
Deposit date:2017-11-18
Release date:2018-11-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:STRUCTURAL CHARACTERIZATION OF A223, A STRUCTURAL PROTEIN FROM SULFOLOBUS TURRETED ICOSAHEDRAL VIRUS (STIV)
To Be Published
1MJ4
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Crystal Structure Analysis of the cytochrome b5 domain of human sulfite oxidase
Descriptor: GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ...
Authors:Rudolph, M.J, Johnson, J.L, Rajagopalan, K.V, Kisker, C.
Deposit date:2002-08-26
Release date:2002-09-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:The 1.2 A structure of the human sulfite oxidase cytochrome b(5) domain.
Acta Crystallogr.,Sect.D, 59, 2003

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