2K69
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2K68
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2KE8
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![BU of 2ke8 by Molmil](/molmil-images/mine/2ke8) | NMR solution structure of metal-modified DNA | Descriptor: | DNA (5'-D(*TP*TP*AP*AP*TP*TP*TP*(D33)P*(D33)P*(D33)P*AP*AP*AP*TP*TP*AP*A)-3'), SILVER ION | Authors: | Johannsen, S, Duepre, N, Boehme, D, Mueller, J, Sigel, R.K.O. | Deposit date: | 2009-01-27 | Release date: | 2010-02-09 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Solution structure of a DNA double helix with consecutive metal-mediated base pairs. Nat.Chem., 2, 2010
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2K67
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6RLS
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![BU of 6rls by Molmil](/molmil-images/mine/6rls) | Concerted dynamics of metallo-base pairs in an A/B-form helical transition (apo species) | Descriptor: | DNA (5'-D(*CP*GP*TP*CP*TP*CP*AP*TP*GP*AP*TP*AP*CP*G)-3')_apo | Authors: | Schmidt, O.P, Jurt, S, Johannsen, S, Karimi, A, Sigel, R.K.O, Luedtke, N.W. | Deposit date: | 2019-05-02 | Release date: | 2019-10-09 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Concerted dynamics of metallo-base pairs in an A/B-form helical transition. Nat Commun, 10, 2019
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2M54
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![BU of 2m54 by Molmil](/molmil-images/mine/2m54) | Refined NMR solution structure of metal-modified DNA | Descriptor: | DNA (5'-D(*TP*TP*AP*AP*TP*TP*TP*(D33)P*(D33)P*(D33)P*AP*AP*AP*TP*TP*AP*A)-3'), SILVER ION | Authors: | Kumbhar, S, Johannsen, S, Sigel, R.K, Waller, M.P, Mueller, J. | Deposit date: | 2013-02-13 | Release date: | 2013-05-15 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | A QM/MM refinement of an experimental DNA structure with metal-mediated base pairs. J.Inorg.Biochem., 127, 2013
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2MFP
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7QR4
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![BU of 7qr4 by Molmil](/molmil-images/mine/7qr4) | human CPEB3 HDV-like ribozyme | Descriptor: | RNA CPEB3 ribozyme, U1 small nuclear ribonucleoprotein A | Authors: | Przytula-Mally, A.I, Engilberge, S, Johannsen, S, Olieric, V, Masquida, B, Sigel, R.K.O. | Deposit date: | 2022-01-17 | Release date: | 2022-10-26 | Last modified: | 2024-01-31 | Method: | X-RAY DIFFRACTION (2.83 Å) | Cite: | Anticodon-like loop-mediated dimerization in the crystal structures of HdV-like CPEB3 ribozymes Biorxiv, 2022
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7QR3
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![BU of 7qr3 by Molmil](/molmil-images/mine/7qr3) | Chimpanzee CPEB3 HDV-like ribozyme | Descriptor: | GLYCEROL, POTASSIUM ION, U1 small nuclear ribonucleoprotein A, ... | Authors: | Przytula-Mally, A.I, Engilberge, S, Johannsen, S, Olieric, V, Masquida, B, Sigel, R.K.O. | Deposit date: | 2022-01-10 | Release date: | 2022-10-26 | Last modified: | 2024-01-31 | Method: | X-RAY DIFFRACTION (2.18 Å) | Cite: | Anticodon-like loop-mediated dimerization in the crystal structures of HdV-like CPEB3 ribozymes Biorxiv, 2022
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7Q48
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7Q6L
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7QA2
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6GN4
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![BU of 6gn4 by Molmil](/molmil-images/mine/6gn4) | tc-DNA/tc-DNA duplex | Descriptor: | Tc-DNA (5'-D(*(TCJ)P*(TTK)P*(TCJ)P*(TCS)P*(TCS)P*(TCJ)P*(TTK)P*(TTK)P*(TCY)P*(TCJ))-3'), Tc-DNA (5'-D(*(TCS)P*(TTK)P*(TCY)P*(TCY)P*(TCS)P*(TCJ)P*(TCJ)P*(TCS)P*(TCY)P*(TCS))-3') | Authors: | Istrate, A, Johannsen, S, Istrate, A, Sigel, R.K.O, Leumann, C. | Deposit date: | 2018-05-29 | Release date: | 2018-06-06 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | NMR solution structure of tricyclo-DNA containing duplexes: insight into enhanced thermal stability and nuclease resistance. Nucleic Acids Res., 47, 2019
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6GMY
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![BU of 6gmy by Molmil](/molmil-images/mine/6gmy) | Tc-DNA/RNA duplex | Descriptor: | RNA (5'-R(*GP*UP*AP*AP*GP*CP*CP*GP*AP*G)-3'), Tc-DNA (5'-(*(TCJ)P*(TTK)P*(TCJ)P*(TCS)P*(TCS)P*(TCJ)P*(TTK)P*(TTK)P*(TCY)P*(TCJ))-3') | Authors: | Istrate, A, Johannsen, S, Istrate, A, Sigel, R.K.O, Leumann, C. | Deposit date: | 2018-05-28 | Release date: | 2018-06-13 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | NMR solution structure of tricyclo-DNA containing duplexes: insight into enhanced thermal stability and nuclease resistance. Nucleic Acids Res., 47, 2019
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6GPI
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![BU of 6gpi by Molmil](/molmil-images/mine/6gpi) | Tc-DNA/DNA duplex | Descriptor: | DNA (5'-D(*GP*TP*AP*AP*GP*CP*CP*GP*AP*G)-3'), tc-DNA (5'-D(*(TCJ)P*(TTK)P*(TCJ)P*(TCS)P*(TCS)P*(TCJ)P*(TTK)P*(TTK)P*(TCY)P*(TCJ))-3') | Authors: | Istrate, A, Johannsen, S, Istrate, A, Sigel, R.K.O, Leumann, C. | Deposit date: | 2018-06-05 | Release date: | 2018-06-13 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | NMR solution structure of tricyclo-DNA containing duplexes: insight into enhanced thermal stability and nuclease resistance. Nucleic Acids Res., 47, 2019
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6FY7
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![BU of 6fy7 by Molmil](/molmil-images/mine/6fy7) | Concerted dynamics of metallo-base pairs in an A/B-form helical transition (minor species) | Descriptor: | DNA (5'-D(*CP*GP*TP*CP*TP*CP*AP*TP*GP*AP*TP*AP*CP*G)-3')_minor, MERCURY (II) ION | Authors: | Schmidt, O.P, Jurt, S, Johannsen, S, Karimi, A, Sigel, R.K.O, Luedtke, N.W. | Deposit date: | 2018-03-11 | Release date: | 2019-10-09 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Concerted dynamics of metallo-base pairs in an A/B-form helical transition. Nat Commun, 10, 2019
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6FY6
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![BU of 6fy6 by Molmil](/molmil-images/mine/6fy6) | Concerted dynamics of metallo-base pairs in an A/B-form helical transition (major species) | Descriptor: | DNA (5'-D(*CP*GP*TP*CP*TP*CP*AP*TP*GP*AP*TP*AP*CP*G)-3')_major, MERCURY (II) ION | Authors: | Schmidt, O.P, Jurt, S, Johannsen, S, Karimi, A, Sigel, R.K.O, Luedtke, N.W. | Deposit date: | 2018-03-11 | Release date: | 2019-10-09 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | Concerted dynamics of metallo-base pairs in an A/B-form helical transition. Nat Commun, 10, 2019
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6EZ0
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![BU of 6ez0 by Molmil](/molmil-images/mine/6ez0) | Specific phosphorothioate substitution within domain 6 of a group II intron ribozyme leads to changes in local structure and metal ion binding | Descriptor: | RNA (27-MER) | Authors: | Erat, M.C, Besic, E, Oberhuber, M, Johannsen, S, Sigel, R.K.O. | Deposit date: | 2017-11-13 | Release date: | 2018-01-03 | Last modified: | 2024-06-19 | Method: | SOLUTION NMR | Cite: | Specific phosphorothioate substitution within domain 6 of a group II intron ribozyme leads to changes in local structure and metal ion binding. J. Biol. Inorg. Chem., 23, 2018
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