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PDB: 205 results

5L6D
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Crystal structure of the human METTL3-METTL14 complex bound to SAH
Descriptor: ACETATE ION, MAGNESIUM ION, N6-adenosine-methyltransferase 70 kDa subunit, ...
Authors:Sledz, P, Jinek, M.
Deposit date:2016-05-29
Release date:2016-10-12
Method:X-RAY DIFFRACTION (1.852 Å)
Cite:Structural insights into the molecular mechanism of the m(6)A writer complex.
Elife, 5, 2016
6I0U
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Crystal structure of DmTailor in complex with U6 RNA
Descriptor: MAGNESIUM ION, RNA (5'-R(*UP*UP*UP*U)-3'), Terminal uridylyltransferase Tailor
Authors:Kroupova, A, Ivascu, A, Jinek, M.
Deposit date:2018-10-26
Release date:2018-12-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Structural basis for acceptor RNA substrate selectivity of the 3' terminal uridylyl transferase Tailor.
Nucleic Acids Res., 47, 2019
5L6E
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Crystal structure of the human METTL3-METTL14 complex bound to SAM
Descriptor: ACETATE ION, MAGNESIUM ION, N6-adenosine-methyltransferase 70 kDa subunit, ...
Authors:Sledz, P, Jinek, M.
Deposit date:2016-05-29
Release date:2016-10-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Structural insights into the molecular mechanism of the m(6)A writer complex.
Elife, 5, 2016
8ORJ
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Cryo-EM structure of human tRNA ligase RTCB in complex with human PYROXD1.
Descriptor: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Loeff, L, Kroupova, A, Asanovic, I, Boneberg, F, Pfleiderer, M.M, Ferdigg, A, Ackle, F, Martinez, J, Jinek, M.
Deposit date:2023-04-14
Release date:2024-10-30
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Mechanistic basis for oxidative stress protection of the human tRNA ligase complex by the oxidoreductase PYROXD1
BioRxiv, 2023
5NG6
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Crystal structure of FnCas12a bound to a crRNA
Descriptor: CRISPR-associated endonuclease Cpf1, MAGNESIUM ION, crRNA
Authors:Swarts, D.C, van der Oost, J, Jinek, M.
Deposit date:2017-03-16
Release date:2017-06-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.342 Å)
Cite:Structural Basis for Guide RNA Processing and Seed-Dependent DNA Targeting by CRISPR-Cas12a.
Mol. Cell, 66, 2017
6I0S
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Crystal structure of DmTailor in complex with UMPNPP
Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, MAGNESIUM ION, Terminal uridylyltransferase Tailor
Authors:Kroupova, A, Ivascu, A, Jinek, M.
Deposit date:2018-10-26
Release date:2018-12-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for acceptor RNA substrate selectivity of the 3' terminal uridylyl transferase Tailor.
Nucleic Acids Res., 47, 2019
6I0T
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Crystal structure of DmTailor in complex with GpU
Descriptor: RNA (5'-R(*GP*U)-3'), Terminal uridylyltransferase Tailor
Authors:Kroupova, A, Ivascu, A, Jinek, M.
Deposit date:2018-10-26
Release date:2018-12-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for acceptor RNA substrate selectivity of the 3' terminal uridylyl transferase Tailor.
Nucleic Acids Res., 47, 2019
6RVZ
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Crystal structure of ANGEL2, a 2',3'-cyclic phosphatase, in complex with adenosine-2',3'-vanadate
Descriptor: ADENOSINE, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Kroupova, A, Jinek, M.
Deposit date:2019-06-03
Release date:2020-05-20
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:ANGEL2 is a member of the CCR4 family of deadenylases with 2',3'-cyclic phosphatase activity.
Science, 369, 2020
1R4P
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Shiga toxin type 2
Descriptor: 1,2-ETHANEDIOL, 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, FORMIC ACID, ...
Authors:Fraser, M.E, Fujinaga, M, Cherney, M.M, Melton-Celsa, A.R, Twiddy, E.M, O'Brien, A.D, James, M.N.G.
Deposit date:2003-10-07
Release date:2004-05-11
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structure of Shiga Toxin Type 2 (Stx2) from Escherichia coli O157:H7.
J.Biol.Chem., 279, 2004
1R4Q
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Shiga toxin
Descriptor: SHT cytotoxin A subunit, Shigella toxin chain B
Authors:Fraser, M.E, Fujinaga, M, Cherney, M.M, Melton-Celsa, A.R, Twiddy, E.M, O'Brien, A.D, James, M.N.G.
Deposit date:2003-10-07
Release date:2004-05-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of Shiga Toxin Type 2 (Stx2) from Escherichia coli O157:H7.
J.Biol.Chem., 279, 2004
2Y8W
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Structure of CRISPR endoribonuclease Cse3 bound to 20 nt RNA
Descriptor: 5'-R(*UP*CP*CP*CP*CP*AP*CP*GP*CP*GP*UP*GP*UP*GP *GP*GP*DGP*AP*UP*G)-3', CSE3
Authors:Sashital, D.G, Jinek, M, Doudna, J.A.
Deposit date:2011-02-11
Release date:2011-05-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:An RNA-Induced Conformational Change Required for Crispr RNA Cleavage by the Endoribonuclease Cse3.
Nat.Struct.Mol.Biol., 18, 2011
2Y8Y
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Structure B of CRISPR endoribonuclease Cse3 bound to 19 nt RNA
Descriptor: 5'-R(*UP*CP*CP*CP*CP*AP*CP*GP*CP*GP*UP*GP*UP*GP *GP*GP*DGP*AP*U)-3', CSE3
Authors:Sashital, D.G, Jinek, M, Doudna, J.A.
Deposit date:2011-02-11
Release date:2011-05-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:An RNA-Induced Conformational Change Required for Crispr RNA Cleavage by the Endoribonuclease Cse3.
Nat.Struct.Mol.Biol., 18, 2011
2Y9H
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BU of 2y9h by Molmil
Structure A of CRISPR endoribonuclease Cse3 bound to 19 nt RNA
Descriptor: 5'-R(*UP*CP*CP*CP*CP*AP*CP*GP*CP*GP*UP*GP*UP*GP *GP*GP*DGP*AP*UP)-3', CSE3
Authors:Sashital, D.G, Jinek, M, Doudna, J.A.
Deposit date:2011-02-14
Release date:2011-05-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:An RNA-Induced Conformational Change Required for Crispr RNA Cleavage by the Endoribonuclease Cse3.
Nat.Struct.Mol.Biol., 18, 2011
2XLI
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BU of 2xli by Molmil
Crystal structure of the Csy4-crRNA complex, monoclinic form
Descriptor: 5'-R(*CP*UP*GP*CP*CP*GP*UP*AP*UP*AP*GP*GP*CP*A*DG*C)-3', CSY4 ENDORIBONUCLEASE
Authors:Haurwitz, R.E, Jinek, M, Wiedenheft, B, Zhou, K, Doudna, J.A.
Deposit date:2010-07-20
Release date:2010-09-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Sequence- and Structure-Specific RNA Processing by a Crispr Endonuclease.
Science, 329, 2010
2XLJ
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Crystal structure of the Csy4-crRNA complex, hexagonal form
Descriptor: 5'-R(*CP*UP*GP*CP*CP*GP*UP*AP*UP*AP*GP*GP*CP*A*DG*C)-3', CSY4 ENDORIBONUCLEASE
Authors:Haurwitz, R.E, Jinek, M, Wiedenheft, B, Zhou, K, Doudna, J.A.
Deposit date:2010-07-20
Release date:2010-09-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Sequence- and Structure-Specific RNA Processing by a Crispr Endonuclease.
Science, 329, 2010
2XLK
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BU of 2xlk by Molmil
Crystal structure of the Csy4-crRNA complex, orthorhombic form
Descriptor: 5'-R(*CP*UP*GP*CP*CP*GP*UP*AP*UP*AP*GP*GP*CP*A*DG*C)-3', CSY4 ENDORIBONUCLEASE
Authors:Haurwitz, R.E, Jinek, M, Wiedenheft, B, Zhou, K, Doudna, J.A.
Deposit date:2010-07-21
Release date:2010-09-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.805 Å)
Cite:Sequence- and Structure-Specific RNA Processing by a Crispr Endonuclease.
Science, 329, 2010
5FW2
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BU of 5fw2 by Molmil
Crystal structure of SpCas9 variant EQR bound to sgRNA and TGAG PAM target DNA
Descriptor: CRISPR-ASSOCIATED ENDONUCLEASE CAS9/CSN1, MAGNESIUM ION, NON-TARGET DNA STRAND, ...
Authors:Anders, C, Bargsten, K, Jinek, M.
Deposit date:2016-02-11
Release date:2016-06-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.676 Å)
Cite:Structural Plasticity of Pam Recognition by Engineered Variants of the RNA-Guided Endonuclease Cas9.
Mol.Cell, 61, 2016
5FW3
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BU of 5fw3 by Molmil
Crystal structure of SpCas9 variant VRER bound to sgRNA and TGCG PAM target DNA
Descriptor: CRISPR-ASSOCIATED ENDONUCLEASE CAS9/CSN1, MAGNESIUM ION, NON-TARGET DNA STRAND, ...
Authors:Anders, C, Bargsten, K, Jinek, M.
Deposit date:2016-02-11
Release date:2016-06-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Plasticity of Pam Recognition by Engineered Variants of the RNA-Guided Endonuclease Cas9.
Mol.Cell, 61, 2016
5FSH
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BU of 5fsh by Molmil
Crystal structure of Thermus thermophilus Csm6
Descriptor: CSM6, NICKEL (II) ION
Authors:Niewoehner, O, Jinek, M.
Deposit date:2016-01-06
Release date:2016-01-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Structural Basis for the Endoribonuclease Activity of the Type III-A Crispr-Associated Protein Csm6.
RNA, 22, 2016
3P3I
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BU of 3p3i by Molmil
Crystal structure of the F36A mutant of the fluoroacetyl-CoA-specific thioesterase FlK in complex with fluoroacetate and CoA
Descriptor: COENZYME A, Fluoroacetyl coenzyme A thioesterase, fluoroacetic acid
Authors:Weeks, A.M, Coyle, S.M, Jinek, M, Doudna, J.A, Chang, M.C.Y.
Deposit date:2010-10-04
Release date:2010-10-20
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and biochemical studies of a fluoroacetyl-CoA-specific thioesterase reveal a molecular basis for fluorine selectivity.
Biochemistry, 49, 2010
3P2R
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BU of 3p2r by Molmil
Crystal structure of the fluoroacetyl-CoA-specific thioesterase FlK in complex with fluoroacetate
Descriptor: Fluoroacetyl coenzyme A thioesterase, fluoroacetic acid
Authors:Weeks, A.M, Coyle, S.M, Jinek, M, Doudna, J.A, Chang, M.C.Y.
Deposit date:2010-10-03
Release date:2010-10-20
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Structural and biochemical studies of a fluoroacetyl-CoA-specific thioesterase reveal a molecular basis for fluorine selectivity.
Biochemistry, 49, 2010
3P2S
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Crystal structure of the fluoroacetyl-CoA-specific thioesterase FlK in an open conformation
Descriptor: Fluoroacetyl coenzyme A thioesterase
Authors:Weeks, A.M, Coyle, S.M, Jinek, M, Doudna, J.A, Chang, M.C.Y.
Deposit date:2010-10-04
Release date:2010-10-20
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural and biochemical studies of a fluoroacetyl-CoA-specific thioesterase reveal a molecular basis for fluorine selectivity.
Biochemistry, 49, 2010
5FW1
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BU of 5fw1 by Molmil
Crystal structure of SpyCas9 variant VQR bound to sgRNA and TGAG PAM target DNA
Descriptor: CRISPR-ASSOCIATED ENDONUCLEASE CAS9/CSN1, MAGNESIUM ION, NON-TARGET DNA STRAND, ...
Authors:Anders, C, Bargsten, K, Jinek, M.
Deposit date:2016-02-11
Release date:2016-04-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.499 Å)
Cite:Structural Plasticity of Pam Recognition by Engineered Variants of the RNA-Guided Endonuclease Cas9.
Mol.Cell, 61, 2016
3P2Q
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Crystal structure of the fluoroacetyl-CoA-specific thioesterase, FlK
Descriptor: Fluoroacetyl coenzyme A thioesterase
Authors:Weeks, A.M, Coyle, S.M, Jinek, M, Doudna, J.A, Chang, M.C.Y.
Deposit date:2010-10-03
Release date:2010-10-20
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and biochemical studies of a fluoroacetyl-CoA-specific thioesterase reveal a molecular basis for fluorine selectivity.
Biochemistry, 49, 2010
3P3F
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Crystal structure of the F36A mutant of the fluoroacetyl-CoA-specific thioesterase FlK
Descriptor: Fluoroacetyl coenzyme A thioesterase
Authors:Weeks, A.M, Coyle, S.M, Jinek, M, Doudna, J.A, Chang, M.C.Y.
Deposit date:2010-10-04
Release date:2010-10-20
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and biochemical studies of a fluoroacetyl-CoA-specific thioesterase reveal a molecular basis for fluorine selectivity.
Biochemistry, 49, 2010

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