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PDB: 501 results

5DJ5
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BU of 5dj5 by Molmil
Crystal structure of rice DWARF14 in complex with synthetic strigolactone GR24
Descriptor: (3E,3aR,8bS)-3-({[(2R)-4-methyl-5-oxo-2,5-dihydrofuran-2-yl]oxy}methylidene)-3,3a,4,8b-tetrahydro-2H-indeno[1,2-b]furan-2-one, Probable strigolactone esterase D14
Authors:Zhou, X.E, Zhao, L.-H, Yi, W, Wu, Z.-S, Liu, Y, Kang, Y, Hou, L, de Waal, P.W, Li, S, Jiang, Y, Melcher, K, Xu, H.E.
Deposit date:2015-09-01
Release date:2015-10-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Destabilization of strigolactone receptor DWARF14 by binding of ligand and E3-ligase signaling effector DWARF3.
Cell Res., 25, 2015
1P7M
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BU of 1p7m by Molmil
SOLUTION STRUCTURE AND BASE PERTURBATION STUDIES REVEAL A NOVEL MODE OF ALKYLATED BASE RECOGNITION BY 3-METHYLADENINE DNA GLYCOSYLASE I
Descriptor: 3-METHYL-3H-PURIN-6-YLAMINE, DNA-3-methyladenine glycosylase I, ZINC ION
Authors:Cao, C, Kwon, K, Jiang, Y.L, Drohat, A.C, Stivers, J.T.
Deposit date:2003-05-02
Release date:2003-11-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure and base perturbation studies reveal a novel mode of alkylated base recognition by 3-methyladenine DNA glycosylase I
J.Biol.Chem., 278, 2003
8HDW
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BU of 8hdw by Molmil
Cyanophage Pam3 Sheath-tube
Descriptor: Pam3 sheath protein, pam3 tube
Authors:Yang, F, Jiang, Y.L, Zhou, C.Z.
Deposit date:2022-11-06
Release date:2023-01-18
Last modified:2023-02-01
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Fine structure and assembly pattern of a minimal myophage Pam3.
Proc.Natl.Acad.Sci.USA, 120, 2023
4YRV
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BU of 4yrv by Molmil
Crystal structure of Anabaena transcription factor HetR complexed with 21-bp DNA from hetP promoter
Descriptor: CALCIUM ION, DNA (5'-D(P*AP*TP*GP*AP*GP*GP*GP*GP*TP*TP*AP*GP*AP*CP*CP*CP*CP*TP*CP*GP*C)-3'), DNA (5'-D(P*GP*CP*GP*AP*GP*GP*GP*GP*TP*CP*TP*AP*AP*CP*CP*CP*CP*TP*CP*AP*T)-3'), ...
Authors:Hu, H.X, Jiang, Y.L, Zhao, M.X, Zhang, C.C, Chen, Y, Zhou, C.Z.
Deposit date:2015-03-16
Release date:2015-12-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insights into HetR-PatS interaction involved in cyanobacterial pattern formation
Sci Rep, 5, 2015
8HDR
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BU of 8hdr by Molmil
Cyanophage Pam3 neck
Descriptor: Pam3 adaptor protein, Pam3 connector protein, Pam3 sheath protein, ...
Authors:Yang, F, Jiang, Y.L, Zhou, C.Z.
Deposit date:2022-11-06
Release date:2023-02-01
Method:ELECTRON MICROSCOPY (3.66 Å)
Cite:Fine structure and assembly pattern of a minimal myophage Pam3.
Proc.Natl.Acad.Sci.USA, 120, 2023
5DI0
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BU of 5di0 by Molmil
Crystal structure of Dln1
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Jia, N, Jiang, Y.L, Cheng, W, Wang, H.W, Zhou, C.Z, Chen, Y.
Deposit date:2015-08-31
Release date:2016-02-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for receptor recognition and pore formation of a zebrafish aerolysin-like protein.
Embo Rep., 17, 2016
5HWY
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BU of 5hwy by Molmil
Structural mechanisms of extracellular ion exchange and induced binding-site occlusion in the sodium-calcium exchanger NCX_Mj soaked with 10 mM Na+ and zero Ca2+
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, ACETATE ION, PENTADECANE, ...
Authors:Liao, J, Jiang, Y.X, Faraldo-Gomez, J.D.
Deposit date:2016-01-29
Release date:2016-05-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.098 Å)
Cite:Mechanism of extracellular ion exchange and binding-site occlusion in a sodium/calcium exchanger
Nat.Struct.Mol.Biol., 23, 2016
6LR0
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BU of 6lr0 by Molmil
structure of human bile salt exporter ABCB11
Descriptor: Bile salt export pump
Authors:Wang, L, Hou, W.T, Chen, L, Jiang, Y.L, Xu, D, Sun, L.F, Zhou, C.Z, Chen, Y.
Deposit date:2020-01-15
Release date:2020-04-15
Last modified:2023-01-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structure of human bile salts exporter ABCB11.
Cell Res., 30, 2020
4YNL
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BU of 4ynl by Molmil
Crystal structure of the hood domain of Anabaena HetR in complex with the hexapeptide ERGSGR derived from PatS
Descriptor: Heterocyst differentiation control protein, Heterocyst inhibition-signaling peptide
Authors:Hu, H.X, Jiang, Y.L, Zhao, M.X, Zhang, C.C, Chen, Y, Zhou, C.Z.
Deposit date:2015-03-10
Release date:2015-12-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insights into HetR-PatS interaction involved in cyanobacterial pattern formation
Sci Rep, 5, 2015
1Q3F
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BU of 1q3f by Molmil
Uracil DNA glycosylase bound to a cationic 1-aza-2'-deoxyribose-containing DNA
Descriptor: 5'-D(*AP*AP*AP*GP*AP*TP*AP*AP*CP*A)-3', 5'-D(*TP*GP*TP*(NRI)P*AP*TP*CP*TP*T)-3', PHOSPHATE ION, ...
Authors:Bianchet, M.A, Seiple, L.A, Jiang, Y.L, Ichikawa, Y, Amzel, L.M, Stivers, J.T.
Deposit date:2003-07-29
Release date:2004-03-23
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Electrostatic guidance of glycosyl cation migration along the reaction coordinate of uracil DNA glycosylase.
Biochemistry, 42, 2003
7MHZ
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BU of 7mhz by Molmil
Human Hedgehog acyltransferase (HHAT) in complex with a palmitoylated Hedgehog peptide product and a Fab antibody fragment
Descriptor: 3H02 Fab heavy chain, 3H02 Fab light chain, Digitonin, ...
Authors:Long, S.B, Jiang, Y.
Deposit date:2021-04-16
Release date:2021-06-16
Last modified:2021-08-25
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Substrate and product complexes reveal mechanisms of Hedgehog acylation by HHAT.
Science, 372, 2021
8J40
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BU of 8j40 by Molmil
Crystal Structure of CATB8 in complex with chloramphenicol
Descriptor: CHLORAMPHENICOL, CatB8, GLYCEROL, ...
Authors:Liao, J, Kuang, L, Jiang, Y.
Deposit date:2023-04-18
Release date:2024-02-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Chloramphenicol Binding Sites of Acinetobacter baumannii Chloramphenicol Acetyltransferase CatB8.
Acs Infect Dis., 10, 2024
4GX0
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BU of 4gx0 by Molmil
Crystal structure of the GsuK L97D mutant
Descriptor: CALCIUM ION, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Kong, C, Zeng, W, Ye, S, Chen, L, Sauer, D.B, Lam, Y, Derebe, M.G, Jiang, Y.
Deposit date:2012-09-03
Release date:2012-12-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Distinct gating mechanisms revealed by the structures of a multi-ligand gated K(+) channel.
elife, 1, 2012
4ZBM
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BU of 4zbm by Molmil
Crystal structure of Drosophila cyclic nucleotide gated channel pore mimicking NaK mutant
Descriptor: BARIUM ION, POTASSIUM ION, Potassium channel protein
Authors:Lam, Y, Zeng, W, Derebe, M.G, Jiang, Y.
Deposit date:2015-04-14
Release date:2015-07-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural implications of weak Ca2+ block in Drosophila cyclic nucleotide-gated channels.
J.Gen.Physiol., 146, 2015
4GX2
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BU of 4gx2 by Molmil
GsuK channel bound to NAD
Descriptor: CALCIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PHOSPHATE ION, ...
Authors:Kong, C, Zeng, W, Ye, S, Chen, L, Sauer, D.B, Lam, Y, Derebe, M.G, Jiang, Y.
Deposit date:2012-09-03
Release date:2012-12-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Distinct gating mechanisms revealed by the structures of a multi-ligand gated K(+) channel.
elife, 1, 2012
4GX1
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BU of 4gx1 by Molmil
Crystal structure of the GsuK bound to ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, PHOSPHATE ION, ...
Authors:Kong, C, Zeng, W, Ye, S, Chen, L, Sauer, D.B, Lam, Y, Derebe, M.G, Jiang, Y.
Deposit date:2012-09-03
Release date:2012-12-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Distinct gating mechanisms revealed by the structures of a multi-ligand gated K(+) channel.
elife, 1, 2012
1AIP
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BU of 1aip by Molmil
EF-TU EF-TS COMPLEX FROM THERMUS THERMOPHILUS
Descriptor: ELONGATION FACTOR TS, ELONGATION FACTOR TU
Authors:Wang, Y, Jiang, Y, Meyering-Voss, M, Sprinzl, M, Sigler, P.B.
Deposit date:1997-04-22
Release date:1997-10-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of the EF-Tu.EF-Ts complex from Thermus thermophilus.
Nat.Struct.Biol., 4, 1997
4IPN
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BU of 4ipn by Molmil
The complex structure of 6-phospho-beta-glucosidase BglA-2 with thiocellobiose-6P from Streptococcus pneumoniae
Descriptor: 6-O-phosphono-alpha-L-idopyranose-(1-4)-4-thio-beta-D-glucopyranose, 6-phospho-beta-glucosidase
Authors:Yu, W.L, Jiang, Y.L, Andreas, P, Cheng, W, Bai, X.H, Ren, Y.M, Thompsonn, J, Zhou, C.Z, Chen, Y.X.
Deposit date:2013-01-10
Release date:2013-04-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.411 Å)
Cite:Structural insights into the substrate specificity of a 6-phospho-&[beta]-glucosidase BglA-2 from Streptococcus pneumoniae TIGR4
J.Biol.Chem., 288, 2013
4IPL
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BU of 4ipl by Molmil
The crystal structure of 6-phospho-beta-glucosidase BglA-2 from Streptococcus pneumoniae
Descriptor: 6-phospho-beta-glucosidase, GLYCEROL
Authors:Yu, W.L, Jiang, Y.L, Andreas, P, Cheng, W, Bai, X.H, Ren, Y.M, Thompsonn, J, Zhou, C.Z, Chen, Y.X.
Deposit date:2013-01-10
Release date:2013-04-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:Structural insights into the substrate specificity of a 6-phospho-&[beta]-glucosidase BglA-2 from Streptococcus pneumoniae TIGR4
J.Biol.Chem., 288, 2013
3HIA
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BU of 3hia by Molmil
Crystal structure of the choline binding domain of Spr1274 in Streptococcus pneumoniae
Descriptor: Choline binding protein, PHOSPHOCHOLINE, SULFATE ION
Authors:Zhang, Z.-Y, Li, W.-Z, Jiang, Y.-L, Bao, R, Zhou, C.-Z, Chen, Y.-X.
Deposit date:2009-05-19
Release date:2009-08-04
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Crystal structure of the choline binding domain of Spr1274 in Streptococcus pneumoniae
To be Published
3IBH
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BU of 3ibh by Molmil
Crystal structure of Saccharomyces cerevisiae Gtt2 in complex with glutathione
Descriptor: GLUTATHIONE, Saccharomyces cerevisiae Gtt2
Authors:Ma, X.X, Jiang, Y.L, He, Y.X, Bao, R, Chen, Y.X, Zhou, C.Z.
Deposit date:2009-07-15
Release date:2009-10-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of yeast glutathione-S-transferase Gtt2 reveal a new catalytic type of GST family.
Embo Rep., 10, 2009
4GX5
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BU of 4gx5 by Molmil
GsuK Channel
Descriptor: CALCIUM ION, POTASSIUM ION, TrkA domain protein, ...
Authors:Kong, C, Zeng, W, Ye, S, Chen, L, Sauer, D.B, Lam, Y, Derebe, M.G, Jiang, Y.
Deposit date:2012-09-03
Release date:2012-12-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Distinct gating mechanisms revealed by the structures of a multi-ligand gated K(+) channel.
elife, 1, 2012
4HMP
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BU of 4hmp by Molmil
Crystal structure of iron uptake ABC transporter substrate-binding protein PiaA from Streptococcus pneumoniae TIGR4
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, GLYCEROL, ...
Authors:Cheng, W, Li, Q, Jiang, Y.-L, Chen, Y, Zhou, C.-Z.
Deposit date:2012-10-18
Release date:2013-09-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structures of Streptococcus pneumoniae PiaA and Its Complex with Ferrichrome Reveal Insights into the Substrate Binding and Release of High Affinity Iron Transporters
Plos One, 8, 2013
4HMQ
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BU of 4hmq by Molmil
Crystal structure of streptococcus pneumoniae TIGR4 PiaA in complex with ferrichrome
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
Authors:Cheng, W, Li, Q, Jiang, Y.-L, Chen, Y, Zhou, C.-Z.
Deposit date:2012-10-18
Release date:2013-09-04
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of Streptococcus pneumoniae PiaA and Its Complex with Ferrichrome Reveal Insights into the Substrate Binding and Release of High Affinity Iron Transporters
Plos One, 8, 2013
4HRI
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BU of 4hri by Molmil
Crystal structure of HetR in complex with a 21-bp palindromic DNA at the upstream of the hetP promoter from Anabaena
Descriptor: CALCIUM ION, DNA (5'-D(P*AP*TP*GP*AP*GP*GP*GP*GP*TP*TP*AP*GP*AP*CP*CP*CP*CP*TP*CP*GP*C)-3'), DNA (5'-D(P*GP*CP*GP*AP*GP*GP*GP*GP*TP*CP*TP*AP*AP*CP*CP*CP*CP*TP*CP*AP*T)-3'), ...
Authors:Hu, H.X, Jiang, Y.L, Zhao, M.X, Chen, Y, Zhang, C.C, Zhou, C.Z.
Deposit date:2012-10-28
Release date:2013-04-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.954 Å)
Cite:Structural and biochemical analyses of Anabaena HetR reveal insights into its binding to DNA targets and the inhibitory hexapeptide ERGSGR
To be Published

221051

数据于2024-06-12公开中

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