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PDB: 272 件
1RHH
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BU of 1rhh by Molmil
Crystal Structure of the Broadly HIV-1 Neutralizing Fab X5 at 1.90 Angstrom Resolution
分子名称: Fab X5, heavy chain, light chain
著者Darbha, R, Phogat, S, Labrijn, A.F, Shu, Y, Gu, Y, Andrykovitch, M, Zhang, M.Y, Pantophlet, R, Martin, L, Vita, C, Burton, D.R, Dimitrov, D.S, Ji, X.
登録日2003-11-14
公開日2004-02-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of the Broadly Cross-Reactive HIV-1-Neutralizing Fab X5 and Fine Mapping of Its Epitope
Biochemistry, 43, 2004
6ATP
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BU of 6atp by Molmil
Crystal structure of apo-hGSTA1-1 exhibiting a new conformation of C-terminal helix
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Glutathione S-transferase A1
著者Kumari, V, Ji, X.
登録日2017-08-29
公開日2018-09-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The dynamic nature of hGSTA1-1 C-terminal helix
To be published
6ATQ
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BU of 6atq by Molmil
Crystal structure of apo-hGSTA1-1 exhibiting a new conformation of C-terminal helix
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Glutathione S-transferase A1
著者Kumari, V, Ji, X.
登録日2017-08-29
公開日2018-09-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The dynamic nature of hGSTA1-1 C-terminal helix
To be published
6ATO
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BU of 6ato by Molmil
Crystal structure of hGSTA1-1 complexed with GSH and MPD in each subunit
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GLUTATHIONE, Glutathione S-transferase A1
著者Kumari, V, Ji, X.
登録日2017-08-29
公開日2018-09-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The dynamic nature of hGSTA1-1 C-terminal helix
To be published
6ATR
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BU of 6atr by Molmil
Crystal structure of hGSTA1-1 complexed with two GSH analogues in each subunit
分子名称: 1,2-ETHANEDIOL, 2-AMINO-5-[1-(CARBOXYLATOMETHYLCARBAMOYL)-2-NITROSOSULFANYL-ETHYL]AMINO-5-OXO-PENTANOATE, Glutathione S-transferase A1, ...
著者Kumari, V, Ji, X.
登録日2017-08-29
公開日2018-09-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献hGSTA1 apo structure and dynamic c-terminus helix
To be published
1AJ9
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BU of 1aj9 by Molmil
R-STATE HUMAN CARBONMONOXYHEMOGLOBIN ALPHA-A53S
分子名称: CARBON MONOXIDE, HEMOGLOBIN (ALPHA CHAIN), HEMOGLOBIN (BETA CHAIN), ...
著者Vasquez, G.B, Ji, X, Fronticelli, C, Gilliland, G.L.
登録日1997-05-16
公開日1998-05-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Human carboxyhemoglobin at 2.2 A resolution: structure and solvent comparisons of R-state, R2-state and T-state hemoglobins.
Acta Crystallogr.,Sect.D, 54, 1998
8SL9
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BU of 8sl9 by Molmil
Crystal structure of Francisella tularensis HPPK-DHPS in complex with HPPK inhibitor HP-73
分子名称: 1,2-ETHANEDIOL, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 5'-S-[(2R,4R)-1-{2-[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridine-6-carbonyl)amino]ethyl}-2-carboxypiperidin-4-yl]-5'-thioadenosine, ...
著者Shaw, G.X, Shi, G, Cherry, S, Needle, D, Tropea, J.E, Waugh, D.S, Ji, X.
登録日2023-04-21
公開日2024-05-01
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of Francisella tularensis HPPK-DHPS in complex with HPPK inhibitor HP-73
To be published
4U5T
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BU of 4u5t by Molmil
Crystal Structure of VBP Leucine Zipper with Bound Arylstibonic Acid
分子名称: (2Z)-3-{3-[dihydroxy(oxido)-lambda~5~-stibanyl]phenyl}prop-2-enoic acid, VBP leucine zipper
著者Stagno, J.R, Ji, X.
登録日2014-07-25
公開日2014-08-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.301 Å)
主引用文献P6981, an arylstibonic acid, is a novel low nanomolar inhibitor of cAMP response element-binding protein binding to DNA.
Mol.Pharmacol., 82, 2012
2NUG
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BU of 2nug by Molmil
Crystal structure of RNase III from Aquifex aeolicus complexed with ds-RNA at 1.7-Angstrom Resolution
分子名称: 5'-R(P*AP*AP*GP*GP*UP*CP*AP*UP*UP*CP*G)-3', 5'-R(P*AP*GP*UP*GP*GP*CP*CP*UP*UP*GP*C)-3', MAGNESIUM ION, ...
著者Gan, J.H, Shaw, G, Tropea, J.E, Waugh, D.S, Court, D.L, Ji, X.
登録日2006-11-09
公開日2007-11-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A stepwise model for double-stranded RNA processing by ribonuclease III.
Mol.Microbiol., 67, 2007
8SU7
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BU of 8su7 by Molmil
Crystal structure of Bacillus anthracis dihydroneopterin aldolase
分子名称: 1,2-ETHANEDIOL, 7,8-dihydroneopterin aldolase
著者Shaw, G.X, Li, Y, Yan, H, Ji, X.
登録日2023-05-11
公開日2023-05-24
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of Bacillus anthracis dihydroneopterin aldolase
To be published
1M6T
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BU of 1m6t by Molmil
CRYSTAL STRUCTURE OF B562RIL, A REDESIGNED FOUR HELIX BUNDLE
分子名称: SULFATE ION, Soluble cytochrome b562
著者Chu, R, Takei, J, Knowlton, J.R, Andrykovitch, M, Pei, W, Kajava, A.V, Steinbach, P.J, Ji, X, Bai, Y.
登録日2002-07-17
公開日2002-11-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Redesign of a Four-Helix Bundle Protein by Phage Display Coupled with Proteolysis and Structural Characterization by NMR and X-ray Crystallography
J.Mol.Biol., 323, 2002
1ESR
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BU of 1esr by Molmil
CRYSTAL STRUCTURE OF HUMAN MONOCYTE CHEMOTACTIC PROTEIN-2
分子名称: MONOCYTE CHEMOTACTIC PROTEIN 2
著者Blaszczyk, J, Ji, X.
登録日2000-04-10
公開日2000-12-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Complete crystal structure of monocyte chemotactic protein-2, a CC chemokine that interacts with multiple receptors.
Biochemistry, 39, 2000
1EX7
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BU of 1ex7 by Molmil
CRYSTAL STRUCTURE OF YEAST GUANYLATE KINASE IN COMPLEX WITH GUANOSINE-5'-MONOPHOSPHATE
分子名称: GUANOSINE-5'-MONOPHOSPHATE, GUANYLATE KINASE, SULFATE ION
著者Blaszczyk, J, Ji, X.
登録日2000-05-01
公開日2001-03-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of unligated guanylate kinase from yeast reveals GMP-induced conformational changes.
J.Mol.Biol., 307, 2001
6PC1
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BU of 6pc1 by Molmil
Crystal structure of Helicobacter pylori PPX/GppA (E143A) in complex with ppGpp
分子名称: (2S)-2-hydroxybutanedioic acid, 1,2-ETHANEDIOL, GUANOSINE-5',3'-TETRAPHOSPHATE, ...
著者Song, H, Wang, C, Shaw, G.X, Ji, X.
登録日2019-06-15
公開日2019-11-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Structure and activity of PPX/GppA homologs from Escherichia coli and Helicobacter pylori.
Febs J., 287, 2020
6PC0
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BU of 6pc0 by Molmil
Crystal structure of Helicobacter pylori PPX/GppA
分子名称: (2S)-2-hydroxybutanedioic acid, 1,2-ETHANEDIOL, D-MALATE, ...
著者Song, H, Wang, C, Shaw, G.X, Ji, X.
登録日2019-06-15
公開日2019-11-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure and activity of PPX/GppA homologs from Escherichia coli and Helicobacter pylori.
Febs J., 287, 2020
4OTS
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BU of 4ots by Molmil
Crystal Structure of isolated Operophtera brumata CPV18
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Stuart, D.I, Sutton, G.C, Axford, D, Ji, X.
登録日2014-02-14
公開日2014-05-14
最終更新日2014-09-24
実験手法X-RAY DIFFRACTION (1.704 Å)
主引用文献In cellulo structure determination of a novel cypovirus polyhedrin.
Acta Crystallogr.,Sect.D, 70, 2014
3HD2
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BU of 3hd2 by Molmil
Crystal structure of E. coli HPPK(Q50A) in complex with MgAMPCPP and pterin
分子名称: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, ACETATE ION, CHLORIDE ION, ...
著者Blaszczyk, J, Li, Y, Yan, H, Ji, X.
登録日2009-05-06
公開日2010-05-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Role of loop coupling in enzymatic catalysis and conformational dynamics
To be Published
3HD1
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BU of 3hd1 by Molmil
Crystal structure of E. coli HPPK(N10A) in complex with MgAMPCPP
分子名称: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, ACETATE ION, CHLORIDE ION, ...
著者Blaszczyk, J, Li, Y, Yan, H, Ji, X.
登録日2009-05-06
公開日2010-05-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Role of loop coupling in enzymatic catalysis and conformational dynamics
To be Published
3ILL
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BU of 3ill by Molmil
Crystal structure of E. coli HPPK(D97A)
分子名称: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, CHLORIDE ION
著者Blaszczyk, J, Li, Y, Yan, H, Ji, X.
登録日2009-08-07
公開日2010-08-11
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structural and functional roles of residues D95 and D97 in E. coli HPPK
To be Published
3ILI
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BU of 3ili by Molmil
Crystal structure of E. coli HPPK(D95A)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, ACETATE ION, ...
著者Blaszczyk, J, Li, Y, Yan, H, Ji, X.
登録日2009-08-07
公開日2010-08-11
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural and functional roles of residues D95 and D97 in E. coli HPPK
To be Published
1YY7
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BU of 1yy7 by Molmil
Crystal structure of stringent starvation protein A (SspA), an RNA polymerase-associated transcription factor
分子名称: CITRIC ACID, stringent starvation protein A
著者Hansen, A.-M, Gu, Y, Li, M, Andrykovitch, M, Waugh, D.S, Jin, D.J, Ji, X.
登録日2005-02-23
公開日2005-03-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献Structural basis for the function of stringent starvation protein A as a transcription factor
J.Biol.Chem., 280, 2005
1YYK
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BU of 1yyk by Molmil
Crystal structure of RNase III from Aquifex Aeolicus complexed with double-stranded RNA at 2.5-angstrom resolution
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-R(*CP*GP*CP*GP*AP*AP*UP*UP*CP*GP*CP*G)-3', Ribonuclease III
著者Gan, J, Tropea, J.E, Austin, B.P, Court, D.L, Waugh, D.S, Ji, X.
登録日2005-02-25
公開日2005-11-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Intermediate states of ribonuclease III in complex with double-stranded RNA
Structure, 13, 2005
1YYO
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BU of 1yyo by Molmil
Crystal structure of RNase III mutant E110K from Aquifex aeolicus complexed with double-stranded RNA at 2.9-Angstrom Resolution
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-R(*CP*GP*CP*GP*AP*AP*UP*UP*CP*GP*CP*G)-3', Ribonuclease III
著者Gan, J, Tropea, J.E, Austin, B.P, Court, D.L, Waugh, D.S, Ji, X.
登録日2005-02-25
公開日2005-11-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Intermediate states of ribonuclease III in complex with double-stranded RNA
Structure, 13, 2005
1YZ9
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BU of 1yz9 by Molmil
Crystal structure of RNase III mutant E110Q from Aquifex aeolicus complexed with double stranded RNA at 2.1-Angstrom Resolution
分子名称: 5'-R(*CP*GP*AP*AP*CP*UP*UP*CP*GP*CP*G)-3', Ribonuclease III, SULFATE ION
著者Gan, J, Tropea, J.E, Austin, B.P, Court, D.L, Waugh, D.S, Ji, X.
登録日2005-02-28
公開日2005-11-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Intermediate states of ribonuclease III in complex with double-stranded RNA
Structure, 13, 2005
1YYW
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BU of 1yyw by Molmil
Crystal structure of RNase III from Aquifex aeolicus complexed with double stranded RNA at 2.8-Angstrom Resolution
分子名称: 5'-R(*AP*AP*AP*UP*AP*UP*AP*UP*AP*UP*UP*U)-3', Ribonuclease III
著者Gan, J, Tropea, J.E, Austin, B.P, Court, D.L, Waugh, D.S, Ji, X.
登録日2005-02-25
公開日2005-11-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Intermediate states of ribonuclease III in complex with double-stranded RNA
Structure, 13, 2005

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