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PDB: 2898 results

4ZV8
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Structure of CYP2B6 (Y226H/K262R) with additional mutation Y244W in complex with alpha-Pinene
Descriptor: (+)-alpha-Pinene, 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE, Cytochrome P450 2B6, ...
Authors:Liu, J, Shah, M.B, Stout, C.D, Halpert, J.R.
Deposit date:2015-05-18
Release date:2016-03-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Coumarin Derivatives as Substrate Probes of Mammalian Cytochromes P450 2B4 and 2B6: Assessing the Importance of 7-Alkoxy Chain Length, Halogen Substitution, and Non-Active Site Mutations.
Biochemistry, 55, 2016
4ZXZ
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Crystal structure of a highly thermal stable but inactive levoglucosan kinase.
Descriptor: Levoglucosan kinase
Authors:Bacik, J.P, Klesmith, J.R, Whitehead, T.A.
Deposit date:2015-05-20
Release date:2015-09-23
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Comprehensive Sequence-Flux Mapping of a Levoglucosan Utilization Pathway in E. coli.
Acs Synth Biol, 4, 2015
4IGB
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BU of 4igb by Molmil
Crystal structure of the N-terminal domain of the Streptococcus gordonii adhesin Sgo0707
Descriptor: ACETATE ION, GLYCEROL, LPXTG cell wall surface protein, ...
Authors:Nylander, A, Svensater, G, Senadheera, D.B, Cvitkovitch, D.G, Davies, J.R, Persson, K.
Deposit date:2012-12-17
Release date:2013-06-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structural and Functional Analysis of the N-terminal Domain of the Streptococcus gordonii Adhesin Sgo0707
Plos One, 8, 2013
8G7L
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ATP-bound mtHsp60 V72I
Descriptor: 60 kDa heat shock protein, mitochondrial, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Braxton, J.R, Shao, H, Tse, E, Gestwicki, J.E, Southworth, D.R.
Deposit date:2023-02-16
Release date:2023-07-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Asymmetric apical domain states of mitochondrial Hsp60 coordinate substrate engagement and chaperonin assembly.
Biorxiv, 2023
8G7M
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ATP-bound mtHsp60 V72I focus
Descriptor: 60 kDa heat shock protein, mitochondrial, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Braxton, J.R, Shao, H, Tse, E, Gestwicki, J.E, Southworth, D.R.
Deposit date:2023-02-16
Release date:2023-07-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Asymmetric apical domain states of mitochondrial Hsp60 coordinate substrate engagement and chaperonin assembly.
Biorxiv, 2023
8G7O
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BU of 8g7o by Molmil
ATP- and mtHsp10-bound mtHsp60 V72I focus
Descriptor: 10 kDa heat shock protein, mitochondrial, 60 kDa heat shock protein, ...
Authors:Braxton, J.R, Shao, H, Tse, E, Gestwicki, J.E, Southworth, D.R.
Deposit date:2023-02-16
Release date:2023-07-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Asymmetric apical domain states of mitochondrial Hsp60 coordinate substrate engagement and chaperonin assembly.
Biorxiv, 2023
3O8R
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BU of 3o8r by Molmil
Visualizing ATP-dependent RNA Translocation by the NS3 Helicase from HCV
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, HCV NS3 protease/helicase, ...
Authors:Appleby, T.C, Somoza, J.R.
Deposit date:2010-08-03
Release date:2011-01-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.304 Å)
Cite:Visualizing ATP-Dependent RNA Translocation by the NS3 Helicase from HCV.
J.Mol.Biol., 405, 2011
4IBM
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BU of 4ibm by Molmil
Crystal structure of insulin receptor kinase domain in complex with an inhibitor Irfin-1
Descriptor: 5-(2-phenylpyrazolo[1,5-a]pyridin-3-yl)-3H-pyrazolo[3,4-c]pyridazin-3-one, Insulin receptor
Authors:Wu, J, Anastassiadis, T, Duong-Ly, K.C, Peterson, J.R.
Deposit date:2012-12-08
Release date:2013-08-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A highly selective dual insulin receptor (IR)/insulin-like growth factor 1 receptor (IGF-1R) inhibitor derived from an extracellular signal-regulated kinase (ERK) inhibitor.
J.Biol.Chem., 288, 2013
8G7N
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ATP- and mtHsp10-bound mtHsp60 V72I
Descriptor: 10 kDa heat shock protein, mitochondrial, 60 kDa heat shock protein, ...
Authors:Braxton, J.R, Shao, H, Tse, E, Gestwicki, J.E, Southworth, D.R.
Deposit date:2023-02-16
Release date:2023-07-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Asymmetric apical domain states of mitochondrial Hsp60 coordinate substrate engagement and chaperonin assembly.
Biorxiv, 2023
5CEI
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BU of 5cei by Molmil
Crystal structure of CDK8:Cyclin C complex with compound 22
Descriptor: 1,2-ETHANEDIOL, 4-(4-iodophenoxy)-N-methylthieno[2,3-c]pyridine-2-carboxamide, Cyclin-C, ...
Authors:Kiefer, J.R, Schneider, E.V, Maskos, K, Koehler, M.F.T.
Deposit date:2015-07-06
Release date:2016-02-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Development of a Potent, Specific CDK8 Kinase Inhibitor Which Phenocopies CDK8/19 Knockout Cells.
Acs Med.Chem.Lett., 7, 2016
3ZVB
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BU of 3zvb by Molmil
3C protease of Enterovirus 68 complexed with Michael receptor inhibitor 81
Descriptor: 3C PROTEASE, ETHYL (4R)-4-{[N-(TERT-BUTOXYCARBONYL)-L-PHENYLALANYL]AMINO}-5-[(3S)-2-OXOPYRROLIDIN-3-YL]PENTANOATE
Authors:Tan, J, Perbandt, M, Mesters, J.R, Hilgenfeld, R.
Deposit date:2011-07-24
Release date:2012-08-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:3C Protease of Enterovirus 68: Structure-Based Design of Michael Acceptor Inhibitors and Their Broad-Spectrum Antiviral Effects Against Picornaviruses.
J.Virol., 87, 2013
5CHH
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BU of 5chh by Molmil
Crystal structure of transcriptional regulator CdpR from Pseudomonas aeruginosa
Descriptor: AraC family transcriptional regulator
Authors:Zhao, J.R, Yu, X, Zhu, M, Kang, H.P, Kong, W.N, Ma, J.B, Deng, X, Gan, J.H, Liang, H.H.
Deposit date:2015-07-10
Release date:2016-05-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and Molecular Mechanism of CdpR Involved in Quorum-Sensing and Bacterial Virulence in Pseudomonas aeruginosa
Plos Biol., 14, 2016
3ZV8
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BU of 3zv8 by Molmil
Crystal structure of 3C protease of Enterovirus 68
Descriptor: 3C PROTEASE
Authors:Tan, J, Perbandt, M, Mesters, J.R, Hilgenfeld, R.
Deposit date:2011-07-24
Release date:2012-08-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:3C Protease of Enterovirus 68: Structure-Based Design of Michael Acceptor Inhibitors and Their Broad-Spectrum Antiviral Effects Against Picornaviruses.
J.Virol., 87, 2013
3ZVF
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BU of 3zvf by Molmil
3C protease of Enterovirus 68 complexed with Michael receptor inhibitor 85
Descriptor: 3C PROTEASE, N-[(benzyloxy)carbonyl]-O-tert-butyl-L-seryl-N-{(2R)-5-ethoxy-5-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]pentan-2-yl}-L-phenylalaninamide
Authors:Tan, J, Perbandt, M, Mesters, J.R, Hilgenfeld, R.
Deposit date:2011-07-24
Release date:2012-08-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:3C Protease of Enterovirus 68: Structure-Based Design of Michael Acceptor Inhibitors and Their Broad-Spectrum Antiviral Effects Against Picornaviruses.
J.Virol., 87, 2013
4IPE
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BU of 4ipe by Molmil
Crystal structure of mitochondrial Hsp90 (TRAP1) with AMPPNP
Descriptor: COBALT (II) ION, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Partridge, J.R, Lavery, L.A, Agard, D.A.
Deposit date:2013-01-09
Release date:2014-01-22
Last modified:2014-08-27
Method:X-RAY DIFFRACTION (2.289 Å)
Cite:Structural asymmetry in the closed state of mitochondrial Hsp90 (TRAP1) supports a two-step ATP hydrolysis mechanism.
Mol.Cell, 53, 2014
8EXL
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BU of 8exl by Molmil
Crystal structure of PI3K-alpha in complex with taselisib
Descriptor: 2-methyl-2-(4-{2-[3-methyl-1-(propan-2-yl)-1H-1,2,4-triazol-5-yl]-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl}-1H-pyrazol-1-yl)propanamide, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Kiefer, J.R, Eigenbrot, C, Staben, S.T, Hanan, E.J, Wallweber, H.J.A, Ultsch, M, Braun, M.G, Friedman, L.S, Purkey, H.E.
Deposit date:2022-10-25
Release date:2022-11-30
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.989 Å)
Cite:Discovery of GDC-0077 (Inavolisib), a Highly Selective Inhibitor and Degrader of Mutant PI3K alpha.
J.Med.Chem., 65, 2022
8EXO
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BU of 8exo by Molmil
Crystal structure of PI3K-alpha in complex with compound 19
Descriptor: 1-{(4S,11aM)-2-[(4R)-2-oxo-4-(propan-2-yl)-1,3-oxazolidin-3-yl]-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl}-L-prolinamide, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Kiefer, J.R, Eigenbrot, C, Staben, S.T, Hanan, E.J, Wallweber, H.J.A, Ultsch, M, Braun, M.G, Friedman, L.S, Purkey, H.E.
Deposit date:2022-10-25
Release date:2022-11-30
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Discovery of GDC-0077 (Inavolisib), a Highly Selective Inhibitor and Degrader of Mutant PI3K alpha.
J.Med.Chem., 65, 2022
8EXU
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BU of 8exu by Molmil
Crystal structure of PI3K-alpha in complex with compound 30
Descriptor: (2S)-2-cyclopropyl-2-({(4S,11aM)-2-[(4S)-2-oxo-4-(trifluoromethyl)-1,3-oxazolidin-3-yl]-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl}amino)acetamide, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Kiefer, J.R, Eigenbrot, C, Staben, S.T, Hanan, E.J, Wallweber, H.J.A, Ultsch, M, Braun, M.G, Friedman, L.S, Purkey, H.E.
Deposit date:2022-10-25
Release date:2022-11-30
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Discovery of GDC-0077 (Inavolisib), a Highly Selective Inhibitor and Degrader of Mutant PI3K alpha.
J.Med.Chem., 65, 2022
8EXV
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Crystal structure of PI3K-alpha in complex with compound 32
Descriptor: N~2~-{(4S,11aP)-2-[(4S)-4-(difluoromethyl)-2-oxo-1,3-oxazolidin-3-yl]-5,6-dihydroimidazo[1,2-d][1,4]benzoxazepin-9-yl}-L-alaninamide, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform
Authors:Kiefer, J.R, Eigenbrot, C, Staben, S.T, Hanan, E.J, Wallweber, H.J.A, Ultsch, M, Braun, M.G, Friedman, L.S, Purkey, H.E.
Deposit date:2022-10-25
Release date:2022-11-30
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Discovery of GDC-0077 (Inavolisib), a Highly Selective Inhibitor and Degrader of Mutant PI3K alpha.
J.Med.Chem., 65, 2022
8EEB
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BU of 8eeb by Molmil
Cryo-EM structure of human ABCA7 in Digitonin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Phospholipid-transporting ATPase ABCA7, ...
Authors:Alam, A, Le, L.T.M, Thompson, J.R.
Deposit date:2022-09-06
Release date:2022-12-21
Last modified:2023-02-15
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structures of human ABCA7 provide insights into its phospholipid translocation mechanisms.
Embo J., 42, 2023
8G7K
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BU of 8g7k by Molmil
mtHsp60 V72I apo focus
Descriptor: 60 kDa heat shock protein, mitochondrial
Authors:Braxton, J.R, Shao, H, Tse, E, Gestwicki, J.E, Southworth, D.R.
Deposit date:2023-02-16
Release date:2023-07-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Asymmetric apical domain states of mitochondrial Hsp60 coordinate substrate engagement and chaperonin assembly.
Biorxiv, 2023
8G7J
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BU of 8g7j by Molmil
mtHsp60 V72I apo
Descriptor: 60 kDa heat shock protein, mitochondrial
Authors:Braxton, J.R, Shao, H, Tse, E, Gestwicki, J.E, Southworth, D.R.
Deposit date:2023-02-16
Release date:2023-07-12
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Asymmetric apical domain states of mitochondrial Hsp60 coordinate substrate engagement and chaperonin assembly.
Biorxiv, 2023
5EFS
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BU of 5efs by Molmil
The crystal structure of human kynurenine aminotransferase II
Descriptor: Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial
Authors:Nematollahi, A, Sun, G, Kwan, A, Harrop, S.J, Hanrahan, J.R, Nadvi, N.A, Church, W.B.
Deposit date:2015-10-26
Release date:2015-11-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.82503 Å)
Cite:The crystal structure of human kynurenine aminotransferase II
To Be Published
3WDU
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BU of 3wdu by Molmil
The complex structure of PtLic16A with cellobiose
Descriptor: Beta-1,3-1,4-glucanase, beta-D-glucopyranose, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Cheng, Y.S, Huang, C.H, Chen, C.C, Huang, T.Y, Ko, T.P, Huang, J.W, Wu, T.H, Liu, J.R, Guo, R.T.
Deposit date:2013-06-25
Release date:2014-07-09
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural and mutagenetic analyses of a 1,3-1,4-beta-glucanase from Paecilomyces thermophila
Biochim.Biophys.Acta, 1844, 2014
4I0C
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BU of 4i0c by Molmil
The structure of the camelid antibody cAbHuL5 in complex with human lysozyme
Descriptor: CHLORIDE ION, GLYCEROL, Lysozyme C, ...
Authors:De Genst, E, Chan, P.H, Pardon, E, Kumita, J.R, Christodoulou, J, Menzer, L, Chirgadze, D.Y, Robinson, C.V, Muyldermans, S, Matagne, A, Wyns, L, Dobson, C.M, Dumoulin, M.
Deposit date:2012-11-16
Release date:2013-10-09
Last modified:2013-11-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A nanobody binding to non-amyloidogenic regions of the protein human lysozyme enhances partial unfolding but inhibits amyloid fibril formation.
J.Phys.Chem.B, 117, 2013

224572

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