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PDB: 3278 件

3ZDE
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Potassium free structure of E. coli ExoIX
分子名称: PROTEIN XNI
著者Hemsworth, G.R, Anstey-Gilbert, C.S, Flemming, C.S, Hodskinson, M.R.G, Zhang, J, Sedelnikova, S.E, Stillman, T.J, Sayers, J.R, Artymiuk, P.J.
登録日2012-11-26
公開日2013-07-10
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献The Structure of E. Coli Exoix - Implications for DNA Binding and Catalysis in Flap Endonucleases
Nucleic Acids Res., 41, 2013
3ZDB
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Structure of E. coli ExoIX in complex with the palindromic 5ov4 DNA oligonucleotide, di-magnesium and potassium
分子名称: 5OV4 DNA, 5'-D(*AP*AP*AP*AP*GP*CP*GP*TP*AP*CP*GP*CP)-3', ACETATE ION, ...
著者Hemsworth, G.R, Anstey-Gilbert, C.S, Flemming, C.S, Hodskinson, M.R.G, Zhang, J, Sedelnikova, S.E, Stillman, T.J, Sayers, J.R, Artymiuk, P.J.
登録日2012-11-26
公開日2013-07-10
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献The Structure of E. Coli Exoix - Implications for DNA Binding and Catalysis in Flap Endonucleases
Nucleic Acids Res., 41, 2013
3ZZ9
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Crystal structure of 3C protease of coxsackievirus B3 complexed with alpha, beta-unsaturated ethyl ester inhibitor 83
分子名称: 3C PROTEINASE, ETHYL (5S,8S,11R)-8-BENZYL-5-(2-TERT-BUTOXY-2-OXOETHYL)-3,6,9-TRIOXO-11-{[(3S)-2-OXOPYRROLIDIN-3-YL]METHYL}-1-PHENYL-2-OXA-4,7,10-TRIAZATETRADECAN-14-OATE
著者Tan, J, Anand, K, Mesters, J.R, Hilgenfeld, R.
登録日2011-08-31
公開日2012-09-19
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Peptidic Alpha, Beta-Unsaturated Ethyl Esters as Inhibitors of the 3C Protease of Coxsackie Virus B3: Crystal Structures, Antiviral Activities, and Resistance Mutations
To be Published
3ZDD
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Structure of E. coli ExoIX in complex with the palindromic 5ov6 oligonucleotide and potassium
分子名称: 1,2-ETHANEDIOL, 5OV6 DNA, ISOPROPYL ALCOHOL, ...
著者Flemming, C.S, Hemsworth, G.R, Anstey-Gilbert, C.S, Hodskinson, M.R.G, Zhang, J, Sedelnikova, S.E, Stillman, T.J, Sayers, J.R, Artymiuk, P.J.
登録日2012-11-26
公開日2013-07-10
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The structure of Escherichia coli ExoIX--implications for DNA binding and catalysis in flap endonucleases.
Nucleic Acids Res., 41, 2013
3ZZ6
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Crystal structure of 3C protease of coxsackievirus B3 complexed with Michael receptor inhibitor 75
分子名称: ETHYL (4R)-4-({N-[(BENZYLOXY)CARBONYL]-L-PHENYLALANYL}AMINO)-5-[(3S)-2-OXOPYRROLIDIN-3-YL]PENTANOATE, POLYPROTEIN 3BCD
著者Tan, J, Anand, K, Mesters, J.R, Hilgenfeld, R.
登録日2011-08-31
公開日2012-09-19
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Peptidic Ab-Nonsaturated Ethyl Esters as Inhibitors of the 3C Protease of Coxsackie Virus B3: Crystal Structures, Antiviral Activities, and Resistance Mutations
To be Published
1IUK
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The structure of native ID.343 from Thermus thermophilus
分子名称: hypothetical protein TT1466
著者Wada, T, Shirouzu, M, Park, S.-Y, Tame, J.R, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-03-05
公開日2003-07-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of a conserved CoA-binding protein synthesized by a cell-free system.
Acta Crystallogr.,Sect.D, 59, 2003
1IY7
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Crystal Structure of CPA and sulfamide-based inhibitor complex
分子名称: Carboxypeptidase A, PHENYLALANINE-N-SULFONAMIDE, ZINC ION
著者Kim, S.J, Woo, J.R, Park, J.D, Kim, D.H, Ryu, S.E.
登録日2002-07-24
公開日2003-01-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Sulfamide-Based Inhibitors for Carboxypeptidase A. Novel Type Transition State Analogue Inhibitors for Zinc Proteases
J.Med.Chem., 45, 2002
3ZD8
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Potassium bound structure of E. coli ExoIX in P1
分子名称: POTASSIUM ION, PROTEIN XNI
著者Anstey-Gilbert, C.S, Hemsworth, G.R, Flemming, C.S, Hodskinson, M.R.G, Zhang, J, Sedelnikova, S.E, Stillman, T.J, Sayers, J.R, Artymiuk, P.J.
登録日2012-11-26
公開日2013-07-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Structure of E. Coli Exoix - Implications for DNA Binding and Catalysis in Flap Endonucleases
Nucleic Acids Res., 41, 2013
1KMV
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HUMAN DIHYDROFOLATE REDUCTASE COMPLEXED WITH NADPH AND (Z)-6-(2-[2,5-DIMETHOXYPHENYL]ETHEN-1-YL)-2,4-DIAMINO-5-METHYLPYRIDO[2,3-D]PYRIMIDINE (SRI-9662), A LIPOPHILIC ANTIFOLATE
分子名称: (Z)-6-(2-[2,5-DIMETHOXYPHENYL]ETHEN-1-YL)-2,4-DIAMINO-5-METHYLPYRIDO[2,3-D]PYRIMIDINE, DIHYDROFOLATE REDUCTASE, DIMETHYL SULFOXIDE, ...
著者Klon, A.E, Heroux, A, Ross, L.J, Pathak, V, Johnson, C.A, Piper, J.R, Borhani, D.W.
登録日2001-12-17
公開日2002-07-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Atomic structures of human dihydrofolate reductase complexed with NADPH and two lipophilic antifolates at 1.09 a and 1.05 a resolution.
J.Mol.Biol., 320, 2002
4A82
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Fitted model of staphylococcus aureus sav1866 model ABC transporter in the human cystic fibrosis transmembrane conductance regulator volume map EMD-1966.
分子名称: CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE REGULATOR
著者Rosenberg, M.F, ORyan, L.P, Hughes, G, Zhao, Z, Aleksandrov, L.A, Riordan, J.R, Ford, R.C.
登録日2011-11-18
公開日2012-01-11
最終更新日2024-05-08
実験手法ELECTRON CRYSTALLOGRAPHY (9 Å)
主引用文献The Cystic Fibrosis Transmembrane Conductance Regulator (Cftr):3D Structure and Localisation of a Channel Gate.
J.Biol.Chem., 286, 2011
1KWP
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Crystal Structure of MAPKAP2
分子名称: MAP Kinase Activated Protein Kinase 2, MERCURY (II) ION
著者Meng, W, Swenson, L.L, Fitzgibbon, M.J, Hayakawa, K, ter Haar, E, Behrens, A.E, Fulghum, J.R, Lippke, J.A.
登録日2002-01-30
公開日2002-09-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of Mitogen-activated Protein Kinase-activated Protein (MAPKAP) Kinase 2 Suggests a Bifunctional Switch That Couples Kinase Activation with Nuclear Export
J.Biol.Chem., 277, 2002
1PAA
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STRUCTURE OF A HISTIDINE-X4-HISTIDINE ZINC FINGER DOMAIN: INSIGHTS INTO ADR1-UAS1 PROTEIN-DNA RECOGNITION
分子名称: YEAST TRANSCRIPTION FACTOR ADR1, ZINC ION
著者Bernstein, B.E, Hoffman, R.C, Horvath, S.J, Herriott, J.R, Klevit, R.E.
登録日1994-07-15
公開日1994-10-15
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of a histidine-X4-histidine zinc finger domain: insights into ADR1-UAS1 protein-DNA recognition.
Biochemistry, 33, 1994
1KMS
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HUMAN DIHYDROFOLATE REDUCTASE COMPLEXED WITH NADPH AND 6-([5-QUINOLYLAMINO]METHYL)-2,4-DIAMINO-5-METHYLPYRIDO[2,3-D]PYRIMIDINE (SRI-9439), A LIPOPHILIC ANTIFOLATE
分子名称: 6-([5-QUINOLYLAMINO]METHYL)-2,4-DIAMINO-5-METHYLPYRIDO[2,3-D]PYRIMIDINE, DIHYDROFOLATE REDUCTASE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Klon, A.E, Heroux, A, Ross, L.J, Pathak, V, Johnson, C.A, Piper, J.R, Borhani, D.W.
登録日2001-12-17
公開日2002-07-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.09 Å)
主引用文献Atomic structures of human dihydrofolate reductase complexed with NADPH and two lipophilic antifolates at 1.09 a and 1.05 a resolution.
J.Mol.Biol., 320, 2002
1OXA
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CYTOCHROME P450 (DONOR:O2 OXIDOREDUCTASE)
分子名称: 6-DEOXYERYTHRONOLIDE B, CYTOCHROME P450 ERYF, PROTOPORPHYRIN IX CONTAINING FE
著者Cupp-Vickery, J.R, Poulos, T.L.
登録日1995-07-14
公開日1995-12-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of cytochrome P450eryF involved in erythromycin biosynthesis.
Nat.Struct.Biol., 2, 1995
1UA0
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Aminofluorene DNA adduct at the pre-insertion site of a DNA polymerase
分子名称: 2-AMINOFLUORENE, DNA polymerase I, DNA primer strand, ...
著者Hsu, G.W, Kiefer, J.R, Becherel, O.J, Fuchs, R.P.P, Beese, L.S.
登録日2004-08-11
公開日2004-09-28
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Observing translesion synthesis of an aromatic amine DNA adduct by a high-fidelity DNA polymerase
J.Biol.Chem., 279, 2004
1UA1
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Structure of aminofluorene adduct paired opposite cytosine at the polymerase active site.
分子名称: 2-AMINOFLUORENE, DNA polymerase I, DNA primer strand, ...
著者Hsu, G.W, Kiefer, J.R, Becherel, O.J, Fuchs, R.P.P, Beese, L.S.
登録日2004-08-11
公開日2004-09-28
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Observing translesion synthesis of an aromatic amine DNA adduct by a high-fidelity DNA polymerase
J.Biol.Chem., 279, 2004
4RNV
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G303 Circular Permutation of Old Yellow Enzyme with the Inhibitor p-Hydroxybenzaldehyde
分子名称: FLAVIN MONONUCLEOTIDE, NADPH dehydrogenase 1, P-HYDROXYBENZALDEHYDE
著者Horton, J.R, Daugherty, A.B, Cheng, X, Lutz, S.
登録日2014-10-26
公開日2015-01-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.473 Å)
主引用文献STRUCTURAL AND FUNCTIONAL CONSEQUENCES OF CIRCULAR PERMUTATION ON THE ACTIVE SITE OF OLD YELLOW ENZYME.
ACS Catal, 5, 2015
2KRJ
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High-Resolution Solid-State NMR Structure of a 17.6 kDa Protein
分子名称: COBALT (II) ION, Macrophage metalloelastase
著者Bertini, I, Bhaumik, A, De Pa pe, G, Griffin, R.G, Lelli, M, Lewandowski, J.R, Luchinat, C.
登録日2009-12-18
公開日2010-02-23
最終更新日2024-05-01
実験手法SOLID-STATE NMR
主引用文献High-resolution solid-state NMR structure of a 17.6 kDa protein.
J.Am.Chem.Soc., 132, 2010
8Y6C
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Norovirus GII.10 P domain and 2'-FL (powder)
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GII.10 norovirus P domain in complex with 2'FL (powder), ...
著者Hansman, G, Tame, J.R.H, Kher, G, Pancera, M.
登録日2024-02-02
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Norovirus GII.10 P domain and 2'-FL (powder)
To Be Published
8WEY
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PSI-LHCI of the red alga Cyanidium caldarium RK-1 (NIES-2137)
分子名称: (1~{R})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{R} )-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, BETA-CAROTENE, ...
著者Kato, K, Hamaguchi, T, Nakajima, Y, Kawakami, K, Yonekura, K, Shen, J.R, Nagao, R.
登録日2023-09-19
公開日2024-02-14
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (1.92 Å)
主引用文献The structure of PSI-LHCI from Cyanidium caldarium provides evolutionary insights into conservation and diversity of red-lineage LHCs.
Proc.Natl.Acad.Sci.USA, 121, 2024
2FHD
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Crystal structure of Crb2 tandem tudor domains
分子名称: DNA repair protein rhp9/CRB2, PHOSPHATE ION
著者Lee, J, Botuyan, M.V, Thompson, J.R, Mer, G.
登録日2005-12-23
公開日2007-01-02
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for the methylation state-specific recognition of histone H4-K20 by 53BP1 and Crb2 in DNA repair.
Cell(Cambridge,Mass.), 127, 2006
9FLA
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SOLUTION STRUCTURE OF 6XHIS-TAGGED WILD-TYPE GAUSSIA LUCIFERASE
分子名称: Luciferase
著者Dijkema, F.M, Prestel, A, Winther, J.R, Teilum, K.
登録日2024-06-04
公開日2024-07-17
最終更新日2024-07-31
実験手法SOLUTION NMR
主引用文献A suicidal and extensively disordered luciferase with a bright luminescence.
Protein Sci., 33, 2024
9CL9
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WT 12C IM fraction, B-b3 with RluB bound
分子名称: 23S rRNA, Large ribosomal subunit protein bL20, Large ribosomal subunit protein bL21, ...
著者Lee, J, Sheng, K, Williamson, J.R.
登録日2024-07-10
公開日2024-07-24
実験手法ELECTRON MICROSCOPY (5.04 Å)
主引用文献50S ribosome assembly intermediates at low temperature reveal bound RluB
To Be Published
2F9K
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Crystal structure of human FPPS in complex with Zoledronate and Zn2+
分子名称: Farnesyl Diphosphate Synthase, PHOSPHATE ION, ZINC ION, ...
著者Rondeau, J.-M, Bitsch, F, Bourgier, E, Geiser, M, Hemmig, R, Kroemer, M, Lehmann, S, Ramage, P, Rieffel, S, Strauss, A, Green, J.R, Jahnke, W.
登録日2005-12-06
公開日2006-02-28
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Structural basis for the exceptional in vivo efficacy of bisphosphonate drugs.
Chemmedchem, 1, 2006
8Y6D
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Norovirus GII.10 P domain and 2'-FL (tablet)
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GII.10 norovirus P domain in complex with 2'-FL (tablet), ...
著者Hansman, G, Tame, J.R.H, Kher, G, Pancera, M.
登録日2024-02-02
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.41 Å)
主引用文献Norovirus GII.10 P domain and 2'-FL (tablet)
To Be Published

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件を2024-07-31に公開中

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