Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 5623 results

1FFI
DownloadVisualize
BU of 1ffi by Molmil
STRUCTURAL IMPLICATIONS OF DRUG RESISTANT MUTANTS OF HIV-1 PROTEASE: HIGH RESOLUTION CRYSTAL STRUCTURES OF THE MUTANT PROTEASE/SUBSTRATE ANALOG COMPLEXES
Descriptor: N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide, PROTEASE RETROPEPSIN
Authors:Mahalingam, B, Louis, J.M, Harrison, R.W, Weber, I.T.
Deposit date:2000-07-25
Release date:2001-06-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural implications of drug-resistant mutants of HIV-1 protease: high-resolution crystal structures of the mutant protease/substrate analogue complexes.
Proteins, 43, 2001
6TYK
DownloadVisualize
BU of 6tyk by Molmil
Crystal structure of iodotyrosine deiodinase (IYD) in the semiquinone form bound to FMN and 3-iodo-L-tyrosine
Descriptor: 3-IODO-TYROSINE, CHLORIDE ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Sun, Z, Kavran, J.M, Rokita, S.E.
Deposit date:2019-08-09
Release date:2021-04-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure of Tn IYD bound in the semiquinone form bound to FMN and 3-iodo-L-tyrosine
To Be Published
5IUU
DownloadVisualize
BU of 5iuu by Molmil
Crystal Structure of Indole-3-acetaldehyde Dehydrogenase in Apo form
Descriptor: Aldehyde dehydrogenase family protein
Authors:Lee, S.G, McClerklin, S, Kunkel, B, Jez, J.M.
Deposit date:2016-03-18
Release date:2017-10-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Indole-3-acetaldehyde dehydrogenase-dependent auxin synthesis contributes to virulence of Pseudomonas syringae strain DC3000.
PLoS Pathog., 14, 2018
6AFN
DownloadVisualize
BU of 6afn by Molmil
Crystal structure of class A b-lactamase, PenL, variant Cys69Tyr, from Burkholderia thailandensis, in complex with ceftazidime-like boronic acid
Descriptor: Beta-lactamase, GLYCEROL, PINACOL[[2-AMINO-ALPHA-(1-CARBOXY-1-METHYLETHOXYIMINO)-4-THIAZOLEACETYL]AMINO]METHANEBORONATE
Authors:Cao, T.-P, Choi, J.M, Lee, S.H.
Deposit date:2018-08-08
Release date:2020-01-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Non-catalytic-Region Mutations Conferring Transition of Class A beta-Lactamases Into ESBLs.
Front Mol Biosci, 2020
5JES
DownloadVisualize
BU of 5jes by Molmil
Human carbonic anhydrase II (V121T) complexed with benzo[d]thiazole-2-sulfonamide
Descriptor: 1,3-benzothiazole-2-sulfonamide, Carbonic anhydrase 2, ZINC ION
Authors:Fox, J.M, Kang, K, Sastry, M, Sherman, W, Sankaran, B, Zwart, P.H, Whitesides, G.M.
Deposit date:2016-04-18
Release date:2017-01-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.205 Å)
Cite:Water-Restructuring Mutations Can Reverse the Thermodynamic Signature of Ligand Binding to Human Carbonic Anhydrase.
Angew. Chem. Int. Ed. Engl., 56, 2017
1FGC
DownloadVisualize
BU of 1fgc by Molmil
STRUCTURAL IMPLICATIONS OF DRUG RESISTANT MUTANTS OF HIV-1 PROTEASE: HIGH RESOLUTION CRYSTAL STRUCTURES OF THE MUTANT PROTEASE/SUBSTRATE ANALOG COMPLEXES
Descriptor: N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide, PROTEASE RETROPEPSIN
Authors:Mahalingam, B, Louis, J.M, Harrison, R.W, Weber, I.T.
Deposit date:2000-07-28
Release date:2001-06-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural implications of drug-resistant mutants of HIV-1 protease: high-resolution crystal structures of the mutant protease/substrate analogue complexes.
Proteins, 43, 2001
1FPM
DownloadVisualize
BU of 1fpm by Molmil
MONOVALENT CATION BINDING SITES IN N10-FORMYLTETRAHYDROFOLATE SYNTHETASE FROM MOORELLA THERMOACETICA
Descriptor: CESIUM ION, FORMATE--TETRAHYDROFOLATE LIGASE, SULFATE ION
Authors:Radfar, R, Leaphart, A, Brewer, J.M, Minor, W, Odom, J.D.
Deposit date:2000-08-31
Release date:2001-08-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Cation binding and thermostability of FTHFS monovalent cation binding sites and thermostability of N10-formyltetrahydrofolate synthetase from Moorella thermoacetica.
Biochemistry, 39, 2000
5JE7
DownloadVisualize
BU of 5je7 by Molmil
Human carbonic anhydrase II (F131Y) complexed with benzo[d]thiazole-2-sulfonamide
Descriptor: 1,3-benzothiazole-2-sulfonamide, Carbonic anhydrase 2, ZINC ION
Authors:Fox, J.M, Kang, K, Sastry, M, Sherman, W, Sankaran, B, Zwart, P.H, Whitesides, G.M.
Deposit date:2016-04-17
Release date:2017-01-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Water-Restructuring Mutations Can Reverse the Thermodynamic Signature of Ligand Binding to Human Carbonic Anhydrase.
Angew. Chem. Int. Ed. Engl., 56, 2017
5JJI
DownloadVisualize
BU of 5jji by Molmil
Rho transcription termination factor bound to rU7 and 6 ADP-BeF3 molecules
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Thomsen, N.D, Lawson, M.R, Witkowsky, L.B, Qu, S, Berger, J.M.
Deposit date:2016-04-24
Release date:2016-11-16
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Molecular mechanisms of substrate-controlled ring dynamics and substepping in a nucleic acid-dependent hexameric motor.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
6AX7
DownloadVisualize
BU of 6ax7 by Molmil
The crystal structure of a lysyl hydroxylase from Acanthamoeba polyphaga mimivirus
Descriptor: FE (II) ION, Procollagen lysyl hydroxylase and glycosyltransferase
Authors:Guo, H, Tsai, C, Miller, M.D, Alvarado, S, Tainer, J.A, Phillips Jr, G.N, Kurie, J.M.
Deposit date:2017-09-06
Release date:2018-02-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Pro-metastatic collagen lysyl hydroxylase dimer assemblies stabilized by Fe2+-binding.
Nat Commun, 9, 2018
1FCH
DownloadVisualize
BU of 1fch by Molmil
CRYSTAL STRUCTURE OF THE PTS1 COMPLEXED TO THE TPR REGION OF HUMAN PEX5
Descriptor: PEROXISOMAL TARGETING SIGNAL 1 RECEPTOR, PTS1-CONTAINING PEPTIDE
Authors:Gatto Jr, G.J, Geisbrecht, B.V, Gould, S.J, Berg, J.M.
Deposit date:2000-07-18
Release date:2000-12-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Peroxisomal targeting signal-1 recognition by the TPR domains of human PEX5.
Nat.Struct.Biol., 7, 2000
5JG5
DownloadVisualize
BU of 5jg5 by Molmil
Human carbonic anhydrase II (V121T/F131Y) complexed with benzo[d]thiazole-2-sulfonamide
Descriptor: 1,3-benzothiazole-2-sulfonamide, Carbonic anhydrase 2, ZINC ION
Authors:Fox, J.M, Kang, K, Sastry, M, Sherman, W, Sankaran, B, Zwart, P.H, Whitesides, G.M.
Deposit date:2016-04-19
Release date:2017-01-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Water-Restructuring Mutations Can Reverse the Thermodynamic Signature of Ligand Binding to Human Carbonic Anhydrase.
Angew. Chem. Int. Ed. Engl., 56, 2017
5JGT
DownloadVisualize
BU of 5jgt by Molmil
Human carbonic anhydrase II (F131Y/L198A) complexed with 1,3-thiazole-2-sulfonamide
Descriptor: 1,3-thiazole-2-sulfonamide, Carbonic anhydrase 2, ZINC ION
Authors:Fox, J.M, Kang, K, Sastry, M, Sherman, W, Sankaran, B, Zwart, P.H, Whitesides, G.M.
Deposit date:2016-04-20
Release date:2017-01-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Water-Restructuring Mutations Can Reverse the Thermodynamic Signature of Ligand Binding to Human Carbonic Anhydrase.
Angew. Chem. Int. Ed. Engl., 56, 2017
1FFF
DownloadVisualize
BU of 1fff by Molmil
STRUCTURAL IMPLICATIONS OF DRUG RESISTANT MUTANTS OF HIV-1 PROTEASE : HIGH RESOLUTION CRYSTAL STRUCTURES OF THE MUTANT PROTEASE/SUBSTRATE ANALOG COMPLEXES.
Descriptor: N-[(2R)-2-({N~5~-[amino(iminio)methyl]-L-ornithyl-L-valyl}amino)-4-methylpentyl]-L-phenylalanyl-L-alpha-glutamyl-L-alanyl-L-norleucinamide, PROTEASE RETROPEPSIN
Authors:Mahalingam, B, Louis, J.M, Harrison, R.W, Weber, I.T.
Deposit date:2000-07-25
Release date:2001-06-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural implications of drug-resistant mutants of HIV-1 protease: high-resolution crystal structures of the mutant protease/substrate analogue complexes.
Proteins, 43, 2001
5JJL
DownloadVisualize
BU of 5jjl by Molmil
Rho transcription termination factor bound to rU8 and 5 ADP-BeF3 molecules
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
Authors:Thomsen, N.D, Lawson, M.R, Witkowsky, L.B, Qu, S, Berger, J.M.
Deposit date:2016-04-24
Release date:2016-11-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Molecular mechanisms of substrate-controlled ring dynamics and substepping in a nucleic acid-dependent hexameric motor.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5JME
DownloadVisualize
BU of 5jme by Molmil
Crystal structure of acetylcholine binding protein (AChBP) from Aplysia Californica in complex with alpha-conotoxin PeIA
Descriptor: Soluble acetylcholine receptor, alpha-conotoxin PeIA from Conus pergrandis
Authors:Bobango, J, Sankaran, B, McIntosh, J.M, Talley, T.T.
Deposit date:2016-04-28
Release date:2016-05-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.336 Å)
Cite:Crystal structure of acetylcholine binding protein (AChBP) from Aplysia Californica in complex with alpha-conotoxin PeIA
To Be Published
1FO8
DownloadVisualize
BU of 1fo8 by Molmil
CRYSTAL STRUCTURE OF N-ACETYLGLUCOSAMINYLTRANSFERASE I
Descriptor: ALPHA-1,3-MANNOSYL-GLYCOPROTEIN BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE, METHYL MERCURY ION
Authors:Unligil, U.M, Zhou, S, Yuwaraj, S, Sarkar, M, Schachter, H, Rini, J.M.
Deposit date:2000-08-26
Release date:2001-04-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:X-ray crystal structure of rabbit N-acetylglucosaminyltransferase I: catalytic mechanism and a new protein superfamily.
EMBO J., 19, 2000
6UPF
DownloadVisualize
BU of 6upf by Molmil
Triosephosphate isomerase deficiency: Effect of F240L mutation on enzyme structure
Descriptor: 2-PHOSPHOGLYCOLIC ACID, GLYCEROL, Triosephosphate isomerase
Authors:Romero, J.M.
Deposit date:2019-10-17
Release date:2020-07-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Triosephosphate isomerase deficiency: Effect of F240L mutation on enzyme structure.
Arch.Biochem.Biophys., 689, 2020
1FHX
DownloadVisualize
BU of 1fhx by Molmil
Structure of the pleckstrin homology domain from GRP1 in complex with inositol 1,3,4,5-tetrakisphosphate
Descriptor: GUANINE NUCLEOTIDE EXCHANGE FACTOR AND INTEGRIN BINDING PROTEIN HOMOLOG GRP1, INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE, SULFATE ION
Authors:Ferguson, K.M, Kavran, J.M, Sankaran, V.G, Fournier, E, Isakoff, S.J, Skolnik, E.Y, Lemmon, M.A.
Deposit date:2000-08-02
Release date:2000-08-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for discrimination of 3-phosphoinositides by pleckstrin homology domains
Mol.Cell, 6, 2000
1FM7
DownloadVisualize
BU of 1fm7 by Molmil
CHALCONE ISOMERASE COMPLEXED WITH 5-DEOXYFLAVANONE
Descriptor: 7-HYDROXY-2-(4-HYDROXY-PHENYL)-CHROMAN-4-ONE, CHALCONE-FLAVONONE ISOMERASE 1, SULFATE ION
Authors:Jez, J.M, Noel, J.P.
Deposit date:2000-08-16
Release date:2001-12-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Reaction mechanism of chalcone isomerase. pH dependence, diffusion control, and product binding differences.
J.Biol.Chem., 277, 2002
1FN2
DownloadVisualize
BU of 1fn2 by Molmil
9-AMINO-(N-(2-DIMETHYLAMINO)BUTYL)ACRIDINE-4-CARBOXAMIDE BOUND TO D(CGTACG)2
Descriptor: 9-AMINO-(N-(2-DIMETHYLAMINO)BUTYL)ACRIDINE-4-CARBOXAMIDE, COBALT (II) ION, DNA (5'-D(*CP*GP*TP*AP*CP*G)-3'), ...
Authors:Adams, A, Guss, J.M, Collyer, C.A, Denny, W.A, Wakelin, L.P.G.
Deposit date:2000-08-19
Release date:2000-10-30
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A novel form of intercalation involving four DNA duplexes in an acridine-4-carboxamide complex of d(CGTACG)(2).
Nucleic Acids Res., 28, 2000
5IS8
DownloadVisualize
BU of 5is8 by Molmil
Crystal structure of mouse CARM1 in complex with inhibitor SA0271
Descriptor: 1,2-ETHANEDIOL, 5'-{[(3S)-3-amino-3-carboxypropyl](2-chloroethyl)amino}-5'-deoxyadenosine, Histone-arginine methyltransferase CARM1, ...
Authors:Cura, V, Marechal, N, Mailliot, J, Troffer-Charlier, N, Hassenboehler, P, Wurtz, J.M, Bonnefond, L, Cavarelli, J.
Deposit date:2016-03-15
Release date:2017-03-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.709 Å)
Cite:Crystal structure of mouse CARM1 in complex with inhibitor SA0271
To Be Published
1FLS
DownloadVisualize
BU of 1fls by Molmil
SOLUTION STRUCTURE OF THE CATALYTIC FRAGMENT OF HUMAN COLLAGENASE-3 (MMP-13) COMPLEXED WITH A HYDROXAMIC ACID INHIBITOR
Descriptor: CALCIUM ION, COLLAGENASE-3, N-HYDROXY-2-[(4-METHOXY-BENZENESULFONYL)-PYRIDIN-3-YLMETHYL-AMINO]-3-METHYL-BENZAMIDE, ...
Authors:Moy, F.J, Chanda, P.K, Chen, J.M, Cosmi, S, Edris, W, Levin, J.I, Powers, R.
Deposit date:2000-08-15
Release date:2001-08-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:High-resolution solution structure of the catalytic fragment of human collagenase-3 (MMP-13) complexed with a hydroxamic acid inhibitor.
J.Mol.Biol., 302, 2000
6ATK
DownloadVisualize
BU of 6atk by Molmil
Crystal structure of the human coronavirus 229E spike protein receptor binding domain in complex with human aminopeptidase N
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Aminopeptidase N, ...
Authors:Wong, A.H, Rini, J.M.
Deposit date:2017-08-29
Release date:2017-12-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.505 Å)
Cite:Receptor-binding loops in alphacoronavirus adaptation and evolution.
Nat Commun, 8, 2017
1P6A
DownloadVisualize
BU of 1p6a by Molmil
STRUCTURAL BASIS FOR VARIATION IN ADENOVIRUS AFFINITY FOR THE CELLULAR RECEPTOR CAR (S489Y MUTANT)
Descriptor: Coxsackievirus and adenovirus receptor, Fiber protein
Authors:Howitt, J, Bewley, M.C, Graziano, V, Flanagan, J.M, Freimuth, P.
Deposit date:2003-04-29
Release date:2004-05-11
Last modified:2018-08-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for variation in adenovirus affinity for the cellular coxsackievirus and adenovirus receptor.
J.Biol.Chem., 278, 2003

223790

數據於2024-08-14公開中

PDB statisticsPDBj update infoContact PDBjnumon