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PDB: 5587 件

3R56
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Human Cyclophilin D Complexed with a Fragment
分子名称: 1H-indazol-6-amine, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, Peptidyl-prolyl cis-trans isomerase F, ...
著者Colliandre, L, Ahmed-Belkacem, H, Bessin, Y, Pawlotsky, J.M, Guichou, J.F.
登録日2011-03-18
公開日2012-03-21
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Fragment-based discovery of a new family of non-peptidic small-molecule cyclophilin inhibitors with potent antiviral activities.
Nat Commun, 7, 2016
3R92
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Discovery of a macrocyclic o-aminobenzamide Hsp90 inhibitor with heterocyclic tether that shows extended biomarker activity and in vivo efficacy in a mouse xenograft model.
分子名称: (3aR)-13,13,16-trimethyl-15-oxo-1,2,3,3a,4,5,12,14,15,17,18,19-dodecahydro-13H-10,6-(metheno)pyrrolo[2',1':3,4][1,4,9]triazacyclotetradecino[9,8-a]indole-7-carboxamide, Heat shock protein HSP 90-alpha
著者Zapf, C.W, Bloom, J.D, McBean, J.L, Dushin, R.G, Golas, J.M, Liu, H, Lucas, J, Boschelli, F, Vogan, E.M, Levin, J.I.
登録日2011-03-24
公開日2011-06-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.5801 Å)
主引用文献Discovery of a macrocyclic o-aminobenzamide Hsp90 inhibitor with heterocyclic tether that shows extended biomarker activity and in vivo efficacy in a mouse xenograft model.
Bioorg.Med.Chem.Lett., 21, 2011
3J27
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CryoEM structure of Dengue virus
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein E, ...
著者Zhang, X, Ge, P, Yu, X, Brannan, J.M, Bi, G, Zhang, Q, Schein, S, Zhou, Z.H.
登録日2012-09-26
公開日2012-12-19
最終更新日2020-07-29
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Cryo-EM structure of the mature dengue virus at 3.5-A resolution.
Nat.Struct.Mol.Biol., 20, 2012
3J3P
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Conformational Shift of a Major Poliovirus Antigen Confirmed by Immuno-Cryogenic Electron Microscopy: 135S Poliovirus and C3-Fab Complex
分子名称: C3 antibody, heavy chain, light chain, ...
著者Lin, J, Cheng, N, Hogle, J.M, Steven, A.C, Belnap, D.M.
登録日2013-04-10
公開日2013-07-03
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (9.1 Å)
主引用文献Conformational shift of a major poliovirus antigen confirmed by immuno-cryogenic electron microscopy.
J.Immunol., 191, 2013
3K60
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Crystal structure of N-terminal domain of Plasmodium falciparum Hsp90 (PF07_0029) bound to ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Heat shock protein 86, SULFATE ION
著者Corbett, K.D, Berger, J.M.
登録日2009-10-08
公開日2010-08-18
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the ATP-binding domain of Plasmodium falciparum Hsp90.
Proteins, 78, 2010
3S9G
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Structure of human Hexim1 (delta stammer) coiled coil domain
分子名称: Protein HEXIM1
著者Bigalke, J.M, Blankenfeldt, W, Geyer, M.
登録日2011-06-01
公開日2011-10-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and Dynamics of a Stabilized Coiled-Coil Domain in the P-TEFb Regulator Hexim1.
J.Mol.Biol., 414, 2011
3JBF
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Complex of poliovirus with VHH PVSP19B
分子名称: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
著者Strauss, M, Schotte, L, Thys, B, Filman, D.J, Hogle, J.M.
登録日2015-08-26
公開日2016-01-27
最終更新日2022-12-21
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Five of Five VHHs Neutralizing Poliovirus Bind the Receptor-Binding Site.
J.Virol., 90, 2016
3JAO
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Ciliary microtubule doublet
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ...
著者Maheshwari, A, Obbineni, J.M, Bui, K.H, Shibata, K, Toyoshima, Y.Y, Ishikawa, T.
登録日2015-06-18
公開日2015-08-05
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (23 Å)
主引用文献alpha- and beta-Tubulin Lattice of the Axonemal Microtubule Doublet and Binding Proteins Revealed by Single Particle Cryo-Electron Microscopy and Tomography.
Structure, 23, 2015
3JBC
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Complex of Poliovirus with VHH PVSP29F
分子名称: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
著者Strauss, M, Schotte, L, Thys, B, Filman, D.J, Hogle, J.M.
登録日2015-08-26
公開日2016-01-27
最終更新日2022-12-21
実験手法ELECTRON MICROSCOPY (5.6 Å)
主引用文献Five of Five VHHs Neutralizing Poliovirus Bind the Receptor-Binding Site.
J.Virol., 90, 2016
3JBG
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Complex of poliovirus with VHH PVSS21E
分子名称: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
著者Strauss, M, Schotte, L, Thys, B, Filman, D.J, Hogle, J.M.
登録日2015-08-26
公開日2016-01-27
最終更新日2022-12-21
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Five of Five VHHs Neutralizing Poliovirus Bind the Receptor-Binding Site.
J.Virol., 90, 2016
3JVX
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Crystal structure of Bacillus anthracis dihydrofolate reductase complexed with NADPH and 2,4-diamino-5-(3-(3,4,5-trimethoxyphenyl)prop-1-ynyl)-6-ethylpyrimidine (UCP120A)
分子名称: 6-ethyl-5-[3-(3,4,5-trimethoxyphenyl)prop-1-yn-1-yl]pyrimidine-2,4-diamine, Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Anderson, A.C, Beierlein, J.M, Karri, N.G.
登録日2009-09-17
公開日2010-09-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Mutational Studies into Trimethoprim Resistance in Bacillus anthracis Dihydrofolate Reductase
To be Published
3JW5
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Crystal structure of Bacillus anthracis (Y102F) dihydrofolate reductase complexed with NADPH and Trimethoprim
分子名称: Dihydrofolate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, TRIMETHOPRIM
著者Anderson, A.C, Beierlein, J.M, Karri, N.G.
登録日2009-09-17
公開日2010-09-15
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Mutational Studies into Trimethoprim Resistance in Bacillus anthracis Dihydrofolate Reductase
To be Published
3S9U
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Bacillus anthracis Dihydrofolate Reductase bound to propargyl-linked TMP analog, UCP120J
分子名称: 6-ethyl-5-[3-(4-methoxybiphenyl-3-yl)prop-1-yn-1-yl]pyrimidine-2,4-diamine, Dihydrofolate reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Anderson, A.C, Beierlein, J.M.
登録日2011-06-02
公開日2012-06-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-Activity Studies of Heterocyclic Propargyl-linked TMP Analogs Targeting Bacillus anthracis Dihydrofolate Reductase
To be Published
3SJQ
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BU of 3sjq by Molmil
Crystal structure of a small conductance potassium channel splice variant complexed with calcium-calmodulin
分子名称: 1-phenylurea, CALCIUM ION, Calmodulin, ...
著者Zhang, M, Pascal, J.M, Zhang, J.-F.
登録日2011-06-21
公開日2012-05-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for calmodulin as a dynamic calcium sensor.
Structure, 20, 2012
3K4E
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BU of 3k4e by Molmil
Puf3 RNA binding domain bound to Cox17 RNA 3' UTR recognition sequence site A
分子名称: RNA (5'-R(P*CP*UP*UP*GP*UP*AP*UP*AP*UP*A)-3'), mRNA-binding protein PUF3
著者Zhu, D, Stumpf, C.R, Krahn, J.M, Wickens, M, Hall, T.M.T.
登録日2009-10-05
公開日2009-10-27
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献A 5' cytosine binding pocket in Puf3p specifies regulation of mitochondrial mRNAs.
Proc.Natl.Acad.Sci.USA, 106, 2009
3J48
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Cryo-EM structure of Poliovirus 135S particles
分子名称: Protein VP1, Protein VP2, Protein VP3
著者Butan, C, Fiman, D.J, Hogle, J.M.
登録日2013-06-28
公開日2013-12-04
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (5.5 Å)
主引用文献Cryo-Electron Microscopy Reconstruction Shows Poliovirus 135S Particles Poised for Membrane Interaction and RNA Release.
J.Virol., 88, 2014
3J4B
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BU of 3j4b by Molmil
Structure of T7 gatekeeper protein (gp11)
分子名称: Tail tubular protein A
著者Cuervo, A, Pulido-Cid, M, Chagoyen, M, Arranz, R, Gonzalez-Garcia, V.A, Garcia-Doval, C, Caston, J.R, Valpuesta, J.M, van Raaij, M.J, Martin-Benito, J, Carrascosa, J.L.
登録日2013-07-09
公開日2013-08-07
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Structural characterization of the bacteriophage t7 tail machinery.
J.Biol.Chem., 288, 2013
3QVD
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Exposure of rubrerythrin from Pyrococcus furiosus to peroxide, fifteen second time point.
分子名称: FE (II) ION, FE (III) ION, HYDROGEN PEROXIDE, ...
著者Dillard, B.D, Demick, J.M, Adams, M.W.W, Lanzilotta, W.N.
登録日2011-02-25
公開日2011-06-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A cryo-crystallographic time course for peroxide reduction by rubrerythrin from Pyrococcus furiosus.
J.Biol.Inorg.Chem., 16, 2011
3KML
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Circular Permutant of the Tobacco Mosaic Virus
分子名称: Coat protein
著者Duderstadt, K.E, Dedeo, M.T, Francis, M.B, Berger, J.M.
登録日2009-11-10
公開日2010-02-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.011 Å)
主引用文献Nanoscale protein assemblies from a circular permutant of the tobacco mosaic virus.
Nano Lett., 10, 2010
3L49
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CRYSTAL STRUCTURE OF ABC SUGAR TRANSPORTER SUBUNIT FROM Rhodobacter sphaeroides 2.4.1
分子名称: ABC sugar (Ribose) transporter, periplasmic substrate-binding subunit, UNKNOWN LIGAND
著者Patskovsky, Y, Ozyurt, S, Dickey, M, Do, J, Wasserman, S.R, Sauder, J.M, Burley, S.K, Almo, S.C, New York Structural GenomiX Research Consortium (NYSGXRC), New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-12-18
公開日2010-01-05
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献CRYSTAL STRUCTURE OF ABC SUGAR TRANSPORTER FROM Rhodobacter sphaeroides
To be Published
3KTS
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CRYSTAL STRUCTURE OF GLYCEROL UPTAKE OPERON ANTITERMINATOR REGULATORY PROTEIN FROM LISTERIA MONOCYTOGENES STR. 4b F2365
分子名称: Glycerol uptake operon antiterminator regulatory protein, UNKNOWN LIGAND
著者Patskovsky, Y, Toro, R, Freeman, J, Do, J, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2009-11-25
公開日2009-12-08
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献CRYSTAL STRUCTURE OF GLYCEROL UPTAKE OPERON ANTITERMINATOR REGULATORY PROTEIN FROM LISTERIA MONOCYTOGENES STR. 4b F2365
To be Published
3KPT
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Crystal structure of BcpA, the major pilin subunit of Bacillus cereus
分子名称: CALCIUM ION, Collagen adhesion protein
著者Poor, C.B, Budzik, J.M, Schneewind, O, He, C.
登録日2009-11-16
公開日2009-11-24
最終更新日2021-10-13
実験手法X-RAY DIFFRACTION (2.102 Å)
主引用文献Intramolecular amide bonds stabilize pili on the surface of bacilli.
Proc.Natl.Acad.Sci.USA, 106, 2009
3RKP
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BU of 3rkp by Molmil
Crystal structure of BcpA*(D312A), the major pilin subunit of Bacillus cereus
分子名称: Collagen adhesion protein
著者Hendrickx, A.P, Poor, C.B, Jureller, J.E, Budzik, J.M, He, C, Schneewind, O.
登録日2011-04-18
公開日2012-05-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.243 Å)
主引用文献Isopeptide bonds of the major pilin protein BcpA influence pilus structure and bundle formation on the surface of Bacillus cereus.
Mol.Microbiol., 85, 2012
3RTO
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Acoustically mounted porcine insulin microcrystals yield an X-ray SAD structure
分子名称: Insulin, ZINC ION
著者Soares, A.S, Engel, M.A, Stearns, R, Datwani, S, Olechno, J, Ellson, R, Skinner, J.M, Allaire, M, Orville, A.M.
登録日2011-05-03
公開日2011-05-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Acoustically Mounted Microcrystals Yield High-Resolution X-ray Structures.
Biochemistry, 50, 2011
3IYC
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Poliovirus late RNA-release intermediate
分子名称: Capsid protein VP1, Capsid protein VP2, Genome polyprotein, ...
著者Levy, H.C, Bostina, M, Filman, D.J, Hogle, J.M.
登録日2009-07-21
公開日2010-03-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献Catching a virus in the act of RNA release: a novel poliovirus uncoating intermediate characterized by cryo-electron microscopy.
J.Virol., 84, 2010

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件を2024-07-17に公開中

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