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PDB: 5677 results

1OTC
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THE O. NOVA TELOMERE END BINDING PROTEIN COMPLEXED WITH SINGLE STRAND DNA
Descriptor: DNA (5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3'), PROTEIN (TELOMERE-BINDING PROTEIN ALPHA SUBUNIT), PROTEIN (TELOMERE-BINDING PROTEIN BETA SUBUNIT)
Authors:Horvath, M.P, Schweiker, V.L, Bevilacqua, J.M, Ruggles, J.A, Schultz, S.C.
Deposit date:1998-11-25
Release date:1999-04-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the Oxytricha nova telomere end binding protein complexed with single strand DNA.
Cell(Cambridge,Mass.), 95, 1998
3I15
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Cobalt-substituted metallo-beta-lactamase from Bacillus cereus: residue Cys168 fully oxidized
Descriptor: Beta-lactamase 2, COBALT (II) ION
Authors:Gonzalez, J.M, Buschiazzo, A, Vila, A.J.
Deposit date:2009-06-25
Release date:2009-12-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Evidence of adaptability in metal coordination geometry and active-site loop conformation among B1 metallo-beta-lactamases .
Biochemistry, 49, 2010
3CNB
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BU of 3cnb by Molmil
Crystal structure of signal receiver domain of DNA binding response regulator protein (merR) from Colwellia psychrerythraea 34H
Descriptor: DNA-binding response regulator, merR family
Authors:Patskovsky, Y, Romero, R, Freeman, J, Hu, S, Groshong, C, Wasserman, S.R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-03-25
Release date:2008-04-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of signal receiver domain of DNA binding response regulator (merR) from Colwellia psychrerythraea 34H.
To be Published
1P54
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Effect of Sequence on the Conformational Geometry of DNA Holliday Junctions
Descriptor: 5'-D(*CP*CP*AP*GP*TP*AP*CP*(BRU)P*GP*G)-3', CALCIUM ION, SODIUM ION
Authors:Hays, F.A, Vargason, J.M, Ho, P.S.
Deposit date:2003-04-25
Release date:2003-09-02
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Effect of Sequence on the Conformation of DNA Holliday Junctions
Biochemistry, 42, 2003
3Q6T
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Salivary protein from Lutzomyia longipalpis, Ligand free
Descriptor: 43.2 kDa salivary protein, CITRIC ACID
Authors:Andersen, J.F, Xu, X, Chang, B.W, Collin, N, Valenzuela, J.G, Ribeiro, J.M.
Deposit date:2011-01-03
Release date:2011-07-27
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.93 Å)
Cite:Structure and function of a "yellow" protein from saliva of the sand fly Lutzomyia longipalpis that confers protective immunity against Leishmania major infection.
J.Biol.Chem., 286, 2011
1P8K
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The structure and DNA recognition of a bifunctional homing endonuclease and group I intron splicing factor
Descriptor: 5'-D(P*CP*CP*TP*CP*CP*TP*CP*AP*GP*CP*GP*CP*GP*CP*T)-3', 5'-D(P*GP*CP*GP*CP*GP*CP*TP*GP*AP*GP*GP*AP*GP*GP*TP*TP*TP*C)-3', 5'-D(P*GP*CP*GP*CP*TP*TP*TP*AP*CP*AP*GP*AP*GP*AP*AP*A)-3', ...
Authors:Stoddard, B.L, Bolduc, J.M.
Deposit date:2003-05-07
Release date:2004-01-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and biochemical analyses of DNA and RNA binding by a bifunctional homing endonuclease and group I intron splicing factor.
Genes Dev., 17, 2003
3RHN
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HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN (HINT) FROM RABBIT COMPLEXED WITH GMP
Descriptor: GUANOSINE-5'-MONOPHOSPHATE, HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN
Authors:Brenner, C, Garrison, P, Gilmour, J, Peisach, D, Ringe, D, Petsko, G.A, Lowenstein, J.M.
Deposit date:1997-02-11
Release date:1997-06-16
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of HINT demonstrate that histidine triad proteins are GalT-related nucleotide-binding proteins.
Nat.Struct.Biol., 4, 1997
3R09
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Crystal structure of probable HAD family hydrolase from Pseudomonas fluorescens Pf-5 with bound Mg
Descriptor: Hydrolase, haloacid dehalogenase-like family, MAGNESIUM ION, ...
Authors:Vetting, M.W, Patskovsky, Y, Toro, R, Freeman, J, Miller, S, Sauder, J.M, Burley, S.K, Dunaway-Mariano, D, Allen, K.N, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI), New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2011-03-07
Release date:2011-04-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of probable HAD family hydrolase from Pseudomonas fluorescens Pf-5 with bound Mg
To be Published
1S7Z
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BU of 1s7z by Molmil
Structure of Ocr from Bacteriophage T7
Descriptor: CESIUM ION, Gene 0.3 protein
Authors:Walkinshaw, M.D, Taylor, P, Sturrock, S.S, Atanasiu, C, Berg, T, Henderson, R.M, Edwardson, J.M, Dryden, D.T.
Deposit date:2004-01-30
Release date:2004-02-10
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structure of Ocr from Bacteriophage T7, a Protein that Mimics B-Form DNA
Mol.Cell, 9, 2002
1N83
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BU of 1n83 by Molmil
Crystal Structure of the complex between the Orphan Nuclear Hormone Receptor ROR(alpha)-LBD and Cholesterol
Descriptor: CHOLESTEROL, Nuclear receptor ROR-alpha
Authors:Kallen, J.A, Schlaeppi, J.M, Bitsch, F, Geisse, S, Geiser, M, Delhon, I, Fournier, B.
Deposit date:2002-11-19
Release date:2002-12-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:X-ray Structure of hROR(alpha) LBD at 1.63A: Structural and Functional data that Cholesterol or a Cholesterol derivative is the natural ligand of ROR(alpha)
Structure, 10, 2002
1N8M
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BU of 1n8m by Molmil
Solution structure of Pi4, a four disulfide bridged scorpion toxin active on potassium channels
Descriptor: Potassium channel blocking toxin 4
Authors:Guijarro, J.I, M'Barek, S, Olamendi-Portugal, T, Gomez-Lagunas, F, Garnier, D, Rochat, H, Possani, L.D, Sabatier, J.M, Delepierre, M.
Deposit date:2002-11-21
Release date:2003-09-02
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:Solution structure of Pi4, a short four-disulfide-bridged scorpion toxin specific of potassium channels.
Protein Sci., 12, 2003
3I13
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BU of 3i13 by Molmil
Bacillus cereus Zn-dependent metallo-beta-lactamase at pH 5.8
Descriptor: Beta-lactamase 2, ZINC ION
Authors:Gonzalez, J.M, Buschiazzo, A, Vila, A.J.
Deposit date:2009-06-25
Release date:2009-12-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Evidence of adaptability in metal coordination geometry and active-site loop conformation among B1 metallo-beta-lactamases .
Biochemistry, 49, 2010
4BMK
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BU of 4bmk by Molmil
Serine Palmitoyltransferase K265A from S. paucimobilis with bound PLP- Myriocin Aldimine
Descriptor: Decarboxylated Myriocin, GLYCEROL, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Wadsworth, J.M, Clarke, D.J, McMahon, S.A, Beattie, A.E, Lowther, J, Dunn, T.M, Naismith, J.H, Campopiano, D.J.
Deposit date:2013-05-09
Release date:2013-09-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:The Chemical Basis of Serine Palmitoyltransferase Inhibition by Myriocin.
J.Am.Chem.Soc., 135, 2013
3I45
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BU of 3i45 by Molmil
CRYSTAL STRUCTURE OF putative twin-arginine translocation pathway signal protein from Rhodospirillum rubrum Atcc 11170
Descriptor: NICOTINIC ACID, Twin-arginine translocation pathway signal protein
Authors:Malashkevich, V.N, Toro, R, Morano, C, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2009-07-01
Release date:2009-07-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:CRYSTAL STRUCTURE OF putative twin-arginine translocation pathway signal protein from Rhodospirillum rubrum Atcc 11170
To be Published
1N9E
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BU of 1n9e by Molmil
Crystal structure of Pichia pastoris Lysyl Oxidase PPLO
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Guss, J.M, Duff, A.P.
Deposit date:2002-11-24
Release date:2004-01-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The Crystal Structure of Pichia pastoris Lysyl Oxidase
Biochemistry, 42, 2003
3R4G
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BU of 3r4g by Molmil
Human Cyclophilin D Complexed with a Fragment
Descriptor: 4-sulfamoylbenzoic acid, GLYCEROL, Peptidyl-prolyl cis-trans isomerase F, ...
Authors:Colliandre, L, Ahmed-Belkacem, H, Bessin, Y, Pawlotsky, J.M, Guichou, J.F.
Deposit date:2011-03-17
Release date:2012-03-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Fragment-based discovery of a new family of non-peptidic small-molecule cyclophilin inhibitors with potent antiviral activities.
Nat Commun, 7, 2016
3R57
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BU of 3r57 by Molmil
Human Cyclophilin D Complexed with a Fragment
Descriptor: GLYCEROL, N-(3-aminophenyl)acetamide, Peptidyl-prolyl cis-trans isomerase F, ...
Authors:Colliandre, L, Ahmed-Belkacem, H, Bessin, Y, Pawlotsky, J.M, Guichou, J.F.
Deposit date:2011-03-18
Release date:2012-03-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Fragment-based discovery of a new family of non-peptidic small-molecule cyclophilin inhibitors with potent antiviral activities.
Nat Commun, 7, 2016
3EUB
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BU of 3eub by Molmil
Crystal Structure of Desulfo-Xanthine Oxidase with Xanthine
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, HYDROXY(DIOXO)MOLYBDENUM, ...
Authors:Pauff, J.M, Cao, H, Hille, R.
Deposit date:2008-10-09
Release date:2009-01-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Substrate Orientation and Catalysis at the Molybdenum Site in Xanthine Oxidase: CRYSTAL STRUCTURES IN COMPLEX WITH XANTHINE AND LUMAZINE.
J.Biol.Chem., 284, 2009
3ES7
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BU of 3es7 by Molmil
Crystal structure of divergent enolase from Oceanobacillus Iheyensis complexed with Mg and L-malate.
Descriptor: (2S)-2-hydroxybutanedioic acid, MAGNESIUM ION, Muconate cycloisomerase
Authors:Fedorov, A.A, Fedorov, E.V, Sauder, J.M, Burley, S.K, Gerlt, J.A, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-10-04
Release date:2008-10-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Computation-facilitated assignment of the function in the enolase superfamily: a regiochemically distinct galactarate dehydratase from Oceanobacillus iheyensis .
Biochemistry, 48, 2009
3EVM
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BU of 3evm by Molmil
Crystal structure of the Mimivirus NDK +Kpn-N62L-R107G triple mutant complexed with dCDP
Descriptor: DEOXYCYTIDINE DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase
Authors:Jeudy, S, Lartigue, A, Claverie, J.M, Abergel, C.
Deposit date:2008-10-13
Release date:2009-08-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Dissecting the unique nucleotide specificity of mimivirus nucleoside diphosphate kinase.
J.Virol., 83, 2009
1SNU
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BU of 1snu by Molmil
CRYSTAL STRUCTURE OF THE UNPHOSPHORYLATED INTERLEUKIN-2 TYROSINE KINASE CATALYTIC DOMAIN
Descriptor: STAUROSPORINE, Tyrosine-protein kinase ITK/TSK
Authors:Brown, K, Long, J.M, Vial, S.C, Dedi, N, Dunster, N.J, Renwick, S.B, Tanner, A.J, Frantz, J.D, Fleming, M.A, Cheetham, G.M.T.
Deposit date:2004-03-12
Release date:2004-07-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of interleukin-2 tyrosine kinase and their implications for the design of selective inhibitors.
J.Biol.Chem., 279, 2004
3ETR
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BU of 3etr by Molmil
Crystal structure of xanthine oxidase in complex with lumazine
Descriptor: CALCIUM ION, DIOXOTHIOMOLYBDENUM(VI) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Pauff, J.M, Cao, H, Hille, R.
Deposit date:2008-10-08
Release date:2009-01-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Substrate Orientation and Catalysis at the Molybdenum Site in Xanthine Oxidase: CRYSTAL STRUCTURES IN COMPLEX WITH XANTHINE AND LUMAZINE.
J.Biol.Chem., 284, 2009
4BWY
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P4 PROTEIN FROM BACTERIOPHAGE PHI8 (R32)
Descriptor: P4
Authors:El Omari, K, Meier, C, Kainov, D, Sutton, G, Grimes, J.M, Poranen, M.M, Bamford, D.H, Tuma, R, Stuart, D.I, Mancini, E.J.
Deposit date:2013-07-05
Release date:2013-08-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Tracking in Atomic Detail the Functional Specializations in Viral Reca Helicases that Occur During Evolution.
Nucleic Acids Res., 41, 2013
1SFE
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BU of 1sfe by Molmil
ADA O6-METHYLGUANINE-DNA METHYLTRANSFERASE FROM ESCHERICHIA COLI
Descriptor: ADA O6-METHYLGUANINE-DNA METHYLTRANSFERASE
Authors:Moore, M.H, Gulbis, J.M, Dodson, E.J, Demple, B, Moody, P.C.E.
Deposit date:1996-06-21
Release date:1996-12-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a suicidal DNA repair protein: the Ada O6-methylguanine-DNA methyltransferase from E. coli.
EMBO J., 13, 1994
4C04
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Crystal structure of M. musculus protein arginine methyltransferase PRMT6 with inhibitor
Descriptor: PROTEIN ARGININE N-METHYLTRANSFERASE 6, SINEFUNGIN
Authors:Bonnefond, L, Cura, V, Troffer-Charlier, N, Mailliot, J, Wurtz, J.M, Cavarelli, J.
Deposit date:2013-07-31
Release date:2014-07-30
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.576 Å)
Cite:Functional Insights from High Resolution Structures of Mouse Protein Arginine Methyltransferase 6.
J.Struct.Biol., 191, 2015

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数据于2024-11-06公开中

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