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PDB: 6626 results

3CTN
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BU of 3ctn by Molmil
STRUCTURE OF CALCIUM-SATURATED CARDIAC TROPONIN C, NMR, 30 STRUCTURES
Descriptor: CALCIUM ION, TROPONIN C
Authors:Sia, S.K, Li, M.X, Spyracopoulos, L, Gagne, S.M, Liu, W, Putkey, J.A, Sykes, B.D.
Deposit date:1997-05-08
Release date:1998-05-13
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of cardiac muscle troponin C unexpectedly reveals a closed regulatory domain.
J.Biol.Chem., 272, 1997
3DEN
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BU of 3den by Molmil
Structure of E. coli DHDPS mutant Y107W
Descriptor: Dihydrodipicolinate synthase, GLYCEROL, PHOSPHATE ION, ...
Authors:Pearce, F.G, Gerrard, J.A, Perugini, M.A, Jameson, G.B.
Deposit date:2008-06-10
Release date:2008-11-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mutating the tight-dimer interface of dihydrodipicolinate synthase disrupts the enzyme quaternary structure: toward a monomeric enzyme
Biochemistry, 47, 2008
3DES
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BU of 3des by Molmil
Crystal structure of dipeptide epimerase from Thermotoga maritima complexed with L-Ala-L-Phe dipeptide
Descriptor: ALANINE, MAGNESIUM ION, Muconate cycloisomerase, ...
Authors:Fedorov, A.A, Fedorov, E.V, Imker, H.J, Gerlt, J.A, Almo, S.C.
Deposit date:2008-06-10
Release date:2008-11-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of a dipeptide epimerase enzymatic function guided by homology modeling and virtual screening.
Structure, 16, 2008
3DG6
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Crystal structure of muconate lactonizing enzyme from Mucobacterium Smegmatis complexed with muconolactone
Descriptor: MAGNESIUM ION, Muconate cycloisomerase, [(2S)-5-oxo-2,5-dihydrofuran-2-yl]acetic acid
Authors:Fedorov, A.A, Fedorov, E.V, Sakai, A, Gerlt, J.A, Almo, S.C.
Deposit date:2008-06-12
Release date:2009-03-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Evolution of enzymatic activities in the enolase superfamily: stereochemically distinct mechanisms in two families of cis,cis-muconate lactonizing enzymes
Biochemistry, 48, 2009
3DG7
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Crystal structure of muconate lactonizing enzyme from Mucobacterium Smegmatis complexed with muconolactone
Descriptor: MAGNESIUM ION, Muconate cycloisomerase, [(2S)-5-oxo-2,5-dihydrofuran-2-yl]acetic acid
Authors:Fedorov, A.A, Fedorov, E.V, Sakai, A, Gerlt, J.A, Almo, S.C.
Deposit date:2008-06-12
Release date:2009-03-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Evolution of enzymatic activities in the enolase superfamily: stereochemically distinct mechanisms in two families of cis,cis-muconate lactonizing enzymes
Biochemistry, 48, 2009
3DBA
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BU of 3dba by Molmil
Crystal structure of the cGMP-bound GAF a domain from the photoreceptor phosphodiesterase 6C
Descriptor: Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', GLYCEROL, GUANOSINE-3',5'-MONOPHOSPHATE
Authors:Martinez, S.E, Heikaus, C.C, Klevit, R.E, Beavo, J.A.
Deposit date:2008-05-30
Release date:2008-07-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:The Structure of the GAF A Domain from Phosphodiesterase 6C Reveals Determinants of cGMP Binding, a Conserved Binding Surface, and a Large cGMP-dependent Conformational Change.
J.Biol.Chem., 283, 2008
3DDQ
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BU of 3ddq by Molmil
Structure of phosphorylated Thr160 CDK2/cyclin A in complex with the inhibitor roscovitine
Descriptor: Cell division protein kinase 2, Cyclin-A2, MONOTHIOGLYCEROL, ...
Authors:Echalier, A, Endicott, J.A.
Deposit date:2008-06-06
Release date:2008-07-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:CR8, a potent and selective, roscovitine-derived inhibitor of cyclin-dependent kinases.
Oncogene, 27, 2008
3DER
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BU of 3der by Molmil
Crystal structure of dipeptide epimerase from Thermotoga maritima complexed with L-Ala-L-Lys dipeptide
Descriptor: ALANINE, LYSINE, MAGNESIUM ION, ...
Authors:Fedorov, A.A, Fedorov, E.V, Imker, H.J, Gerlt, J.A, Almo, S.C.
Deposit date:2008-06-10
Release date:2008-11-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discovery of a dipeptide epimerase enzymatic function guided by homology modeling and virtual screening.
Structure, 16, 2008
3DEQ
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BU of 3deq by Molmil
Crystal structure of dipeptide epimerase from Thermotoga maritima complexed with L-Ala-L-Leu dipeptide
Descriptor: ALANINE, LEUCINE, MAGNESIUM ION, ...
Authors:Fedorov, A.A, Fedorov, E.V, Imker, H.J, Gerlt, J.A, Almo, S.C.
Deposit date:2008-06-10
Release date:2008-11-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Discovery of a dipeptide epimerase enzymatic function guided by homology modeling and virtual screening.
Structure, 16, 2008
2R8Z
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BU of 2r8z by Molmil
Crystal structure of YrbI phosphatase from Escherichia coli in complex with a phosphate and a calcium ion
Descriptor: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, CALCIUM ION, PHOSPHATE ION
Authors:Tsodikov, O.V, Aggarwal, P, Rubin, J.R, Stuckey, J.A, Woodard, R.W, Biswas, T.
Deposit date:2007-09-11
Release date:2008-09-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Tail of KdsC: CONFORMATIONAL CHANGES CONTROL THE ACTIVITY OF A HALOACID DEHALOGENASE SUPERFAMILY PHOSPHATASE.
J.Biol.Chem., 284, 2009
2R50
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BU of 2r50 by Molmil
The crystal structure of nonsymbiotic corn hemoglobin 1
Descriptor: ACETIC ACID, Non-symbiotic hemoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Smagghe, B.J, Hoy, J.A, Hargrove, M.S.
Deposit date:2007-09-02
Release date:2007-09-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structure of nonsymbiotic corn hemoglobin 1
To be Published
2R8S
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BU of 2r8s by Molmil
High resolution structure of a specific synthetic FAB bound to P4-P6 RNA ribozyme domain
Descriptor: Fab heavy chain, Fab light chain, MAGNESIUM ION, ...
Authors:Ye, J.D, Tereshko, V, Sidhu, S.S, Koide, S, Kossiakoff, A.A, Piccirilli, J.A.
Deposit date:2007-09-11
Release date:2007-12-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Synthetic antibodies for specific recognition and crystallization of structured RNA
Proc.Natl.Acad.Sci.Usa, 105, 2008
2R8X
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BU of 2r8x by Molmil
Crystal structure of YrbI phosphatase from Escherichia coli
Descriptor: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, CHLORIDE ION
Authors:Tsodikov, O.V, Aggarwal, P, Rubin, J.R, Stuckey, J.A, Woodard, R.W, Biswas, T.
Deposit date:2007-09-11
Release date:2008-09-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Tail of KdsC: CONFORMATIONAL CHANGES CONTROL THE ACTIVITY OF A HALOACID DEHALOGENASE SUPERFAMILY PHOSPHATASE.
J.Biol.Chem., 284, 2009
2R8Y
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BU of 2r8y by Molmil
Crystal structure of YrbI phosphatase from Escherichia coli in a complex with Ca
Descriptor: CALCIUM ION, CHLORIDE ION, YrbI from Escherichia coli
Authors:Tsodikov, O.V, Aggarwal, P, Rubin, J.R, Stuckey, J.A, Woodard, R.W, Biswas, T.
Deposit date:2007-09-11
Release date:2008-09-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Tail of KdsC: CONFORMATIONAL CHANGES CONTROL THE ACTIVITY OF A HALOACID DEHALOGENASE SUPERFAMILY PHOSPHATASE.
J.Biol.Chem., 284, 2009
5HRV
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BU of 5hrv by Molmil
Crystal structure of the fifth bromodomain of human PB1 in complex with 1-ethylisochromeno[3,4-c]pyrazol-5(2H)-one) compound
Descriptor: 1,2-ETHANEDIOL, 1-ethylisochromeno[3,4-c]pyrazol-5(3H)-one, Protein polybromo-1
Authors:Tallant, C, Myrianthopoulos, V, Gaboriaud-Kolar, N, Newman, J.A, Picaud, S, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Mikros, E, Knapp, S.
Deposit date:2016-01-24
Release date:2016-10-12
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Discovery and Optimization of a Selective Ligand for the Switch/Sucrose Nonfermenting-Related Bromodomains of Polybromo Protein-1 by the Use of Virtual Screening and Hydration Analysis.
J.Med.Chem., 59, 2016
4UWM
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BU of 4uwm by Molmil
Type II Baeyer-Villiger monooxygenase.The oxygenating constituent of 3,6-diketocamphane monooxygenase from CAM plasmid of Pseudomonas putida in complex with FMN.
Descriptor: 3,6-DIKETOCAMPHANE 1,6 MONOOXYGENASE, DI(HYDROXYETHYL)ETHER, FLAVIN MONONUCLEOTIDE, ...
Authors:Isupov, M.N, Schroeder, E, Gibson, R.P, Beecher, J, Donadio, G, Saneei, V, Dcunha, S, McGhie, E.J, Sayer, C, Davenport, C.F, Lau, P.C, Hasegawa, Y, Iwaki, H, Kadow, M, Loschinski, K, Bornscheuer, U.T, Bourenkov, G, Littlechild, J.A.
Deposit date:2014-08-12
Release date:2015-08-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Oxygenating Constituent of 3,6-Diketocamphane Monooxygenase from the Cam Plasmid of Pseudomonas Putida: The First Crystal Structure of a Type II Baeyer-Villiger Monooxygenase.
Acta Crystallogr.,Sect.D, 71, 2015
2R8E
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BU of 2r8e by Molmil
Crystal structure of YrbI from Escherichia coli in complex with Mg
Descriptor: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, CHLORIDE ION, MAGNESIUM ION
Authors:Tsodikov, O.V, Aggarwal, P, Rubin, J.R, Stuckey, J.A, Woodard, R, Biswas, T.
Deposit date:2007-09-10
Release date:2008-09-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Tail of KdsC: CONFORMATIONAL CHANGES CONTROL THE ACTIVITY OF A HALOACID DEHALOGENASE SUPERFAMILY PHOSPHATASE.
J.Biol.Chem., 284, 2009
2TIR
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BU of 2tir by Molmil
CRYSTAL STRUCTURE ANALYSIS OF A MUTANT ESCHERICHIA COLI THIOREDOXIN IN WHICH LYSINE 36 IS REPLACED BY GLUTAMIC ACID
Descriptor: COPPER (II) ION, THIOREDOXIN
Authors:Nikkola, M, Gleason, F.K, Fuchs, J.A, Eklund, H.
Deposit date:1993-01-10
Release date:1993-10-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure analysis of a mutant Escherichia coli thioredoxin in which lysine 36 is replaced by glutamic acid.
Biochemistry, 32, 1993
2TPK
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BU of 2tpk by Molmil
AN INVESTIGATION OF THE STRUCTURE OF THE PSEUDOKNOT WITHIN THE GENE 32 MESSENGER RNA OF BACTERIOPHAGE T2 USING HETERONUCLEAR NMR METHODS
Descriptor: RNA (MRNA PSEUDOKNOT)
Authors:Holland, J.A, Hansen, M.R, Du, Z, Hoffman, D.W.
Deposit date:1998-10-28
Release date:1998-11-04
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:An examination of coaxial stacking of helical stems in a pseudoknot motif: the gene 32 messenger RNA pseudoknot of bacteriophage T2.
Rna, 5, 1999
2RDX
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BU of 2rdx by Molmil
Crystal structure of mandelate racemase/muconate lactonizing enzyme from Roseovarius nubinhibens ISM
Descriptor: GLYCEROL, MAGNESIUM ION, Mandelate racemase/muconate lactonizing enzyme, ...
Authors:Patskovsky, Y, Bonanno, J, Sauder, J.M, Ozyurt, S, Gilmore, M, Lau, C, Maletic, M, Gheyi, T, Wasserman, S.R, Koss, J, Gerlt, J.A, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-09-25
Release date:2007-10-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of mandelate racemase/muconate lactonizing enzyme from Roseovarius nubinhibens ISM.
To be Published
4WQB
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BU of 4wqb by Molmil
Thiosulfate dehydrogenase (TsdA) from Allochromatium vinosum - bisulfite soak
Descriptor: DI(HYDROXYETHYL)ETHER, HEME C, IODIDE ION, ...
Authors:Brito, J.A, Denkmann, K, Pereira, I.A.C, Dahl, C, Archer, M.
Deposit date:2014-10-21
Release date:2015-02-18
Last modified:2015-04-15
Method:X-RAY DIFFRACTION (1.5013 Å)
Cite:Thiosulfate Dehydrogenase (TsdA) from Allochromatium vinosum: STRUCTURAL AND FUNCTIONAL INSIGHTS INTO THIOSULFATE OXIDATION.
J.Biol.Chem., 290, 2015
4WQ7
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BU of 4wq7 by Molmil
Thiosulfate dehydrogenase (TsdA) from Allochromatium vinosum - "as isolated" form
Descriptor: HEME C, IODIDE ION, SULFATE ION, ...
Authors:Brito, J.A, Denkmann, K, Pereira, I.A.C, Dahl, C, Archer, M.
Deposit date:2014-10-21
Release date:2015-02-18
Last modified:2015-04-15
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Thiosulfate Dehydrogenase (TsdA) from Allochromatium vinosum: STRUCTURAL AND FUNCTIONAL INSIGHTS INTO THIOSULFATE OXIDATION.
J.Biol.Chem., 290, 2015
3LTY
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BU of 3lty by Molmil
Crystal structure of the mutant V182A,I218A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP
Descriptor: 6-HYDROXYURIDINE-5'-PHOSPHATE, Orotidine 5'-phosphate decarboxylase
Authors:Fedorov, A.A, Fedorov, E.V, Wood, B.M, Gerlt, J.A, Almo, S.C.
Deposit date:2010-02-16
Release date:2010-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Conformational changes in orotidine 5'-monophosphate decarboxylase: "remote" residues that stabilize the active conformation.
Biochemistry, 49, 2010
3LG5
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BU of 3lg5 by Molmil
F198A Epi-isozizaene synthase: Complex with Mg, inorganic pyrophosphate and benzyl triethyl ammonium cation
Descriptor: Epi-isozizaene synthase, MAGNESIUM ION, N-benzyl-N,N-diethylethanaminium, ...
Authors:Aaron, J.A, Lin, X, Cane, D.E, Christianson, D.W.
Deposit date:2010-01-19
Release date:2010-02-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.641 Å)
Cite:Structure of Epi-Isozizaene Synthase from Streptomyces coelicolor A3(2), a Platform for New Terpenoid Cyclization Templates
Biochemistry, 49, 2010
3LRI
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BU of 3lri by Molmil
Solution structure and backbone dynamics of long-[Arg(3)]insulin-like growth factor-I
Descriptor: PROTEIN (INSULIN-LIKE GROWTH FACTOR I)
Authors:Laajoki, L.G, Francis, G.L, Wallace, J.C, Carver, J.A, Keniry, M.A.
Deposit date:1999-04-13
Release date:2000-05-23
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure and backbone dynamics of long-[Arg(3)]insulin-like growth factor-I
J.Biol.Chem., 275, 2000

222624

數據於2024-07-17公開中

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