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PDB: 6628 results

1X9A
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Solution NMR Structure of Protein Tm0979 from Thermotoga maritima. Ontario Center for Structural Proteomics Target TM0979_1_87; Northeast Structural Genomics Consortium Target VT98.
Descriptor: hypothetical protein TM0979
Authors:Gaspar, J.A, Liu, C, Vassall, K.A, Stathopulos, P.B, Meglei, G, Stephen, R, Pineda-Lucena, A, Wu, B, Yee, A, Arrowsmith, C.H, Meiering, E.M, Northeast Structural Genomics Consortium (NESG)
Deposit date:2004-08-20
Release date:2004-12-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A novel member of the YchN-like fold: solution structure of the hypothetical protein Tm0979 from Thermotoga maritima.
Protein Sci., 14, 2005
1XE3
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Crystal Structure of purine nucleoside phosphorylase DeoD from Bacillus anthracis
Descriptor: CHLORIDE ION, purine nucleoside phosphorylase
Authors:Grenha, R, Levdikov, V.M, Fogg, M, Blagova, E.V, Brannigan, J.A, Wilkinson, A.J, Wilson, K.S, Structural Proteomics in Europe (SPINE)
Deposit date:2004-09-09
Release date:2004-10-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Structure of purine nucleoside phosphorylase (DeoD) from Bacillus anthracis.
Acta Crystallogr.,Sect.F, 61, 2005
2C1S
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X-ray structure of biotin binding protein from chicken
Descriptor: BIOTIN BINDING PROTEIN A, BIOTIN-D-SULFOXIDE
Authors:Hytonen, V.P, Niskanen, E.A, Maatta, J.A.E, Huuskonen, J, Helttunen, K.J, Halling, K.K, Slotte, J.P, Nordlund, H.R, Rissanen, K, Johnson, M.S, Salminen, T.A, Kulomaa, M.S, Laitinen, O.H, Airenne, T.T.
Deposit date:2005-09-19
Release date:2007-02-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure and Characterization of a Novel Chicken Biotin-Binding Protein a (Bbp-A).
Bmc Struct.Biol., 7, 2007
1XCV
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Crystal Structure Of (H79AC102D)Dtxr complexed with Nickel(II)
Descriptor: Diphtheria toxin repressor mutant, NICKEL (II) ION
Authors:D'aquino, J.A, Ringe, D.
Deposit date:2004-09-03
Release date:2005-08-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mechanism of metal ion activation of the diphtheria toxin repressor DtxR.
Proc.Natl.Acad.Sci.USA, 102, 2005
2C24
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BU of 2c24 by Molmil
FAMILY 30 CARBOHYDRATE-BINDING MODULE OF CELLULOSOMAL CELLULASE CEL9D- CEL44B OF CLOSTRIDIUM THERMOCELLUM
Descriptor: ENDOGLUCANASE
Authors:Carvalho, A.L, Alves, V.D, Najmudin, S, Romao, M.J, Prates, J.A.M, Ferreira, L.M.A, Bolam, D.N, Gilbert, H.J, Fontes, C.M.G.A.
Deposit date:2005-09-26
Release date:2005-11-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Xyloglucan is Recognized by Carbohydrate-Binding Modules that Interact with Beta-Glucan Chains.
J.Biol.Chem., 281, 2006
1XBY
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BU of 1xby by Molmil
Structure of 3-keto-L-gulonate 6-phosphate decarboxylase E112D/T169A mutant with bound D-ribulose 5-phosphate
Descriptor: 3-keto-L-gulonate 6-phosphate decarboxylase, MAGNESIUM ION, RIBULOSE-5-PHOSPHATE
Authors:Wise, E.L, Yew, W.S, Akana, J, Gerlt, J.A, Rayment, I.
Deposit date:2004-08-31
Release date:2005-04-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Evolution of enzymatic activities in the orotidine 5'-monophosphate decarboxylase suprafamily: structural basis for catalytic promiscuity in wild-type and designed mutants of 3-keto-L-gulonate 6-phosphate decarboxylase
Biochemistry, 44, 2005
1XXP
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Yersinia YopH (residues 163-468) C403S binds phosphotyrosyl peptide at two sites
Descriptor: Hexapeptide ASP-ALA-ASP-GLU-PTR-CLE, Protein-tyrosine phosphatase yopH
Authors:Ivanov, M.I, Stuckey, J.A, Schubert, H.L, Saper, M.A, Bliska, J.B.
Deposit date:2004-11-07
Release date:2005-03-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Two substrate-targeting sites in the Yersinia protein tyrosine phosphatase co-operate to promote bacterial virulence
Mol.Microbiol., 55, 2005
1XFB
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Human Brain Fructose 1,6-(bis)phosphate Aldolase (C isozyme)
Descriptor: Aldolase C
Authors:Arakaki, T.L, Pezza, J.A, Cronin, M.A, Hopkins, C.E, Zimmer, D.B, Tolan, D.R, Allen, K.N.
Deposit date:2004-09-14
Release date:2005-02-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of human brain fructose 1,6-(bis)phosphate aldolase: linking isozyme structure with function
Protein Sci., 13, 2004
2C1Q
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BU of 2c1q by Molmil
X-ray structure of biotin binding protein from chicken
Descriptor: BIOTIN, BIOTIN BINDING PROTEIN A, GLYCEROL
Authors:Hytonen, V.P, Niskanen, E.A, Maatta, J.A.E, Huuskonen, J, Helttunen, K.J, Halling, K.K, Slotte, J.P, Nordlund, H.R, Rissanen, K, Johnson, M.S, Salminen, T.A, Kulomaa, M.S, Laitinen, O.H, Airenne, T.T.
Deposit date:2005-09-19
Release date:2007-02-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure and Characterization of a Novel Chicken Biotin-Binding Protein a (Bbp-A).
Bmc Struct.Biol., 7, 2007
1XME
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BU of 1xme by Molmil
Structure of Recombinant Cytochrome ba3 Oxidase from Thermus thermophilus
Descriptor: COPPER (II) ION, Cytochrome c oxidase polypeptide I, Cytochrome c oxidase polypeptide II, ...
Authors:Hunsicker-Wang, L.M, Pacoma, R.L, Chen, Y, Fee, J.A, Stout, C.D.
Deposit date:2004-10-01
Release date:2005-03-22
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A novel cryoprotection scheme for enhancing the diffraction of crystals of recombinant cytochrome ba3 oxidase from Thermus thermophilus.
Acta Crystallogr.,Sect.D, 61, 2005
1XBX
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BU of 1xbx by Molmil
Structure of 3-keto-L-gulonate 6-phosphate decarboxylase E112D/R139V/T169A mutant with bound D-ribulose 5-phosphate
Descriptor: 3-keto-L-gulonate 6-phosphate decarboxylase, 5-O-phosphono-L-ribulose, MAGNESIUM ION, ...
Authors:Wise, E.L, Yew, W.S, Akana, J, Gerlt, J.A, Rayment, I.
Deposit date:2004-08-31
Release date:2005-04-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Evolution of enzymatic activities in the orotidine 5'-monophosphate decarboxylase suprafamily: structural basis for catalytic promiscuity in wild-type and designed mutants of 3-keto-L-gulonate 6-phosphate decarboxylase
Biochemistry, 44, 2005
1XP3
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BU of 1xp3 by Molmil
Crystal Structure of Endonuclease IV (BA4508) from Bacillus anthracis at 2.57A Resolution.
Descriptor: SULFATE ION, ZINC ION, endonuclease IV
Authors:Fogg, M.J, Levdikov, V.M, Blagova, E.V, Brannigan, J.A, Wilkinson, A.J, Wilson, K.S, Structural Proteomics in Europe (SPINE)
Deposit date:2004-10-08
Release date:2005-10-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Crystal Structure of Endonuclease IV (BA4508) from Bacillus anthracis at 2.57A Resolution.
To be Published
1XEA
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Crystal structure of a Gfo/Idh/MocA family oxidoreductase from Vibrio cholerae
Descriptor: NICKEL (II) ION, Oxidoreductase, Gfo/Idh/MocA family
Authors:R Rajashankar, K, Reynes, J.A, Kniewel, R, Lima, C.D, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-09-09
Release date:2004-09-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of a Gfo/Idh/MocA family oxidoreductase from Vibrio cholerae
To be Published
368D
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BU of 368d by Molmil
STRUCTURAL VARIABILITY OF A-DNA IN CRYSTALS OF THE OCTAMER D(PCPCPCPGPCPGPGPG)
Descriptor: DNA (5'-D(P*CP*CP*CP*GP*CP*GP*GP*G)-3')
Authors:Fernandez, L.G, Subirana, J.A, Verdaguer, N, Pyshnyi, D, Campos, L, Malinina, L.
Deposit date:1997-12-19
Release date:1998-07-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural variability of A-DNA in crystals of the octamer d(pCpCpCpGpCpGpGpG)
J.Biomol.Struct.Dyn., 15, 1997
1XIL
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BU of 1xil by Molmil
HYDROGEN BONDING IN HUMAN MANGANESE SUPEROXIDE DISMUTASE CONTAINING 3-FLUOROTYROSINE
Descriptor: MANGANESE (II) ION, Superoxide dismutase [Mn], mitochondrial
Authors:Ayala, I, Perry, J.J, Szczepanski, J, Cabelli, D.E, Tainer, J.A, Vala, M.T, Nick, H.S, Silverman, D.N.
Deposit date:2004-09-21
Release date:2005-03-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Hydrogen bonding in human manganese superoxide dismutase containing 3-fluorotyrosine
Biophys.J., 89, 2005
391D
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BU of 391d by Molmil
STRUCTURAL VARIABILITY AND NEW INTERMOLECULAR INTERACTIONS OF Z-DNA IN CRYSTALS OF D(PCPGPCPGPCPG)
Descriptor: DNA (5'-D(P*CP*GP*CP*GP*CP*G)-3')
Authors:Malinina, L, Tereshko, V, Ivanova, E, Subirana, J.A, Zarytova, V, Nekrasov, Y.
Deposit date:1998-04-20
Release date:1998-05-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural variability and new intermolecular interactions of Z-DNA in crystals of d(pCpGpCpGpCpG).
Biophys.J., 74, 1998
1XR3
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BU of 1xr3 by Molmil
Actinorhodin Polyketide Ketoreductase with NADP and the Inhibitor Isoniazid bound
Descriptor: 4-(DIAZENYLCARBONYL)PYRIDINE, ACTINORHODIN POLYKETIDE KETOREDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Korman, T.P, Hill, J.A, Vu, T.N, Tsai, S.C.
Deposit date:2004-10-13
Release date:2005-09-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Structural analysis of actinorhodin polyketide ketoreductase: cofactor binding and substrate specificity.
Biochemistry, 43, 2004
2BGV
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BU of 2bgv by Molmil
X-ray structure of ferric cytochrome c-550 from Paracoccus versutus
Descriptor: CYTOCHROME C-550, HEME C
Authors:Worrall, J.A.R, Van Roon, A.-M.M, Ubbink, M, Canters, G.W.
Deposit date:2005-01-05
Release date:2005-05-11
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Effect of Replacing the Axial Methionine Ligand with a Lysine Residue in Cytochrome C-550 from Paracoccus Versutus Assessed by X-Ray Crystallography and Unfolding.
FEBS J., 272, 2005
1XVR
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BU of 1xvr by Molmil
echinomycin (CGTACG)2 complex
Descriptor: 2-CARBOXYQUINOXALINE, 5'-D(*CP*GP*TP*AP*CP*G)-3', ECHINOMYCIN, ...
Authors:Cuesta-Seijo, J.A, Sheldrick, G.M.
Deposit date:2004-10-28
Release date:2005-04-12
Last modified:2012-12-12
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structures of Complexes between Echinomycin and Duplex DNA.
Acta Crystallogr.,Sect.D, 61, 2005
1XUQ
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Crystal Structure of SodA-1 (BA4499) from Bacillus anthracis at 1.8A Resolution.
Descriptor: MANGANESE (II) ION, Superoxide dismutase
Authors:Boucher, I.W, Levdikov, V.M, Blagova, E.V, Fogg, M.J, Brannigan, J.A, Wilkinson, A.J, Wilson, K.S.
Deposit date:2004-10-26
Release date:2005-07-19
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structures of two superoxide dismutases from Bacillus anthracis reveal a novel active centre.
Acta Crystallogr.,Sect.F, 61, 2005
1XXV
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Yersinia YopH (residues 163-468) binds phosphonodifluoromethyl-Phe containing hexapeptide at two sites
Descriptor: Epidermal growth factor receptor derived peptide, Protein-tyrosine phosphatase yopH
Authors:Ivanov, M.I, Stuckey, J.A, Schubert, H.L, Saper, M.A, Bliska, J.B.
Deposit date:2004-11-08
Release date:2005-03-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Two substrate-targeting sites in the Yersinia protein tyrosine phosphatase co-operate to promote bacterial virulence
Mol.Microbiol., 55, 2005
1XMN
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Crystal structure of thrombin bound to heparin
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, ...
Authors:Carter, W.J, Cama, E, Huntington, J.A.
Deposit date:2004-10-04
Release date:2004-11-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of thrombin bound to heparin
J.Biol.Chem., 280, 2005
2CE1
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Structure of reduced Arabidopsis thaliana cytochrome 6A
Descriptor: CYTOCHROME C6, HEME C
Authors:Marcaida, M.J, Schlarb-Ridley, B.G, Worrall, J.A.R, Wastl, J, Evans, T.J, Bendall, D.S, Luisi, B.F, Howe, C.J.
Deposit date:2006-02-02
Release date:2006-07-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of Cytochrome C(6A), a Novel Dithio-Cytochrome of Arabidopsis Thaliana, and its Reactivity with Plastocyanin: Implications for Function.
J.Mol.Biol., 360, 2006
2CN3
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Crystal Structures of Clostridium thermocellum Xyloglucanase
Descriptor: BETA-1,4-XYLOGLUCAN HYDROLASE, CALCIUM ION, alpha-D-xylopyranose-(1-6)-beta-D-glucopyranose-(1-4)-[alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-[beta-D-galactopyranose-(1-2)-alpha-D-xylopyranose-(1-6)]beta-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Martinez-Fleites, C, Taylor, E.J, Guerreiro, C.I.P.D, Prates, J.A.M, Ferreira, L.M.A, Fontes, C.M.G.A, Baumann, M.J, Brumer, H, Davies, G.J.
Deposit date:2006-05-17
Release date:2006-05-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structures of Clostridium Thermocellum Xyloglucanase, Xgh74A, Reveal the Structural Basis for Xyloglucan Recognition and Degradation
J.Biol.Chem., 281, 2006
1QHB
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VANADIUM BROMOPEROXIDASE FROM RED ALGA CORALLINA OFFICINALIS
Descriptor: CALCIUM ION, HALOPEROXIDASE, PHOSPHATE ION
Authors:Isupov, M.N, Dalby, A.R, Brindley, A.A, Littlechild, J.A.
Deposit date:1999-05-11
Release date:2000-07-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of dodecameric vanadium-dependent bromoperoxidase from the red algae Corallina officinalis.
J.Mol.Biol., 299, 2000

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