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PDB: 6669 results

5EBH
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Crystal Structure HEW Lysozyme processed with the CrystalDirect automated mounting and cryo-cooling technology
Descriptor: Lysozyme C
Authors:Zander, U, Hoffmann, G, Cornaciu, I, Marquez, J.A.
Deposit date:2015-10-19
Release date:2016-04-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Automated harvesting and processing of protein crystals through laser photoablation.
Acta Crystallogr D Struct Biol, 72, 2016
5EC0
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BU of 5ec0 by Molmil
Crystal Structure of Actin-like protein Alp7A
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Alp7A, GLYCEROL, ...
Authors:Petek, N.A, Kraemer, J.A, Mullins, R.D, Agard, D.A, DiMaio, F, Baker, D.
Deposit date:2015-10-20
Release date:2016-11-02
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and function of Alp7A reveal both conserved and unique features of plasmid segregation.
To Be Published
7Q1L
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BU of 7q1l by Molmil
Glycosilated Human Serum Apo-tranferrin
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Gavira, J.A, Moreno, A, Campos-Escamilla, C, Gonzalez-Ramirez, L.A, Siliqi, D.
Deposit date:2021-10-20
Release date:2022-03-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:X-ray Characterization of Conformational Changes of Human Apo- and Holo-Transferrin.
Int J Mol Sci, 22, 2021
5VZL
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BU of 5vzl by Molmil
cryo-EM structure of the Cas9-sgRNA-AcrIIA4 anti-CRISPR complex
Descriptor: CRISPR-associated endonuclease Cas9, phage anti-CRISPR AcrIIA4, single guide RNA (116-MER)
Authors:Jiang, F, Liu, J.J, Nogales, E, Doudna, J.A.
Deposit date:2017-05-29
Release date:2017-07-26
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Disabling Cas9 by an anti-CRISPR DNA mimic.
Sci Adv, 3, 2017
5DWI
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BU of 5dwi by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain in Complex with a Resorcinyl 2-Chloro-substituted Diaryl-imine analog 4-[(E)-[(2-chlorophenyl)imino](4-hydroxyphenyl)methyl]benzene-1,3-diol
Descriptor: 4-[(E)-[(2-chlorophenyl)imino](4-hydroxyphenyl)methyl]benzene-1,3-diol, Estrogen receptor, Nuclear receptor coactivator 2
Authors:Nwachukwu, J.C, Wright, N.J, Srinivasan, S, Zheng, Y, Wang, S, Min, J, Dong, C, Liao, Z, Cavett, V, Nowak, J, Houtman, R, Carlson, K.E, Josan, J.S, Elemento, O, Katzenellenbogen, J.A, Zhou, H.B, Nettles, K.W.
Deposit date:2015-09-22
Release date:2016-05-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Predictive features of ligand-specific signaling through the estrogen receptor.
Mol.Syst.Biol., 12, 2016
5DXP
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BU of 5dxp by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain in Complex with the Cyclofenil Derivative 4-[(E)-(1s,5s)-bicyclo[3.3.1]non-9-ylidene(phenyl)methyl]phenol
Descriptor: 4-[(E)-(1s,5s)-bicyclo[3.3.1]non-9-ylidene(phenyl)methyl]phenol, Estrogen receptor, Nuclear receptor coactivator 2
Authors:Nwachukwu, J.C, Srinivasan, S, Zheng, Y, Wang, S, Min, J, Dong, C, Liao, Z, Cavett, V, Nowak, J, Houtman, R, Carlson, K.E, Josan, J.S, Elemento, O, Katzenellenbogen, J.A, Zhou, H.B, Nettles, K.W.
Deposit date:2015-09-23
Release date:2016-05-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Predictive features of ligand-specific signaling through the estrogen receptor.
Mol.Syst.Biol., 12, 2016
6DAO
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BU of 6dao by Molmil
NahE WT selenomethionine
Descriptor: Trans-O-hydroxybenzylidenepyruvate hydratase-aldolase
Authors:Medellin, B.P, LeVieux, J.A, Zhang, Y.J, Whitman, C.P.
Deposit date:2018-05-01
Release date:2019-05-08
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (1.939 Å)
Cite:Structural Characterization of the Hydratase-Aldolases, NahE and PhdJ: Implications for the Specificity, Catalysis, and N-Acetylneuraminate Lyase Subgroup of the Aldolase Superfamily.
Biochemistry, 57, 2018
5VFX
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BU of 5vfx by Molmil
Structure of an accessory protein of the pCW3 relaxosome in complex with the origin of transfer (oriT) DNA
Descriptor: TcpK, oriT
Authors:Traore, D.A.K, Wisniewski, J.A, Flanigan, S.F, Conroy, P.J, Panjikar, S, Mok, Y.-F, Lao, C, Griffin, M.D.W, Adams, V, Rood, J.I, Whisstock, J.C.
Deposit date:2017-04-10
Release date:2018-04-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Crystal structure of TcpK in complex with oriT DNA of the antibiotic resistance plasmid pCW3.
Nat Commun, 9, 2018
1Z96
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BU of 1z96 by Molmil
Crystal structure of the Mud1 UBA domain
Descriptor: UBA-domain protein mud1
Authors:Trempe, J.-F, Brown, N.R, Lowe, E.D, Noble, M.E.M, Gordon, C, Campbell, I.D, Johnson, L.N, Endicott, J.A.
Deposit date:2005-03-31
Release date:2005-10-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mechanism of Lys48-linked polyubiquitin chain recognition by the Mud1 UBA domain
Embo J., 24, 2005
7MD7
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BU of 7md7 by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with triphenylphosphonium analog of chloramphenicol CAM-C4-TPP and protein Y (YfiA) at 2.80A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 16S Ribosomal RNA, 23S Ribosomal RNA, ...
Authors:Chen, C.-W, Pavlova, J.A, Lukianov, D.A, Tereshchenkov, A.G, Makarov, G.I, Khairullina, Z.Z, Tashlitsky, V.N, Paleskava, A, Konevega, A.L, Bogdanov, A.A, Osterman, I.A, Sumbatyan, N.V, Polikanov, Y.S.
Deposit date:2021-04-03
Release date:2021-04-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Binding and Action of Triphenylphosphonium Analog of Chloramphenicol upon the Bacterial Ribosome.
Antibiotics, 10, 2021
5VMQ
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BU of 5vmq by Molmil
STRUCTURE OF THE R105A MUTANT CATALYTIC TRIMER OF ESCHERICHIA COLI ASPARTATE TRANSCARBAMOYLASE AT 2.0-A RESOLUTION
Descriptor: Aspartate carbamoyltransferase, CALCIUM ION, CHLORIDE ION
Authors:Beernink, P.T, Endrizzi, J.A.
Deposit date:2017-04-28
Release date:2017-05-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.012 Å)
Cite:Charge neutralization in the active site of the catalytic trimer of aspartate transcarbamoylase promotes diverse structural changes.
Protein Sci., 26, 2017
1ZEV
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BU of 1zev by Molmil
Crystal Structure of a Pathogenic RNA: CUG Repeats
Descriptor: 5'-R(*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*GP*CP*UP*G)-3'
Authors:Mooers, B.H, Logue, J.S, Berglund, J.A.
Deposit date:2005-04-19
Release date:2005-10-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:The structural basis of myotonic dystrophy from the crystal structure of CUG repeats.
Proc.Natl.Acad.Sci.Usa, 102, 2005
5VGS
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BU of 5vgs by Molmil
Crystal structure of lachrymatory factor synthase from Allium cepa in complex with crotyl alcohol
Descriptor: (2E)-but-2-en-1-ol, (2Z)-but-2-en-1-ol, Lachrymatory-factor synthase
Authors:Silvaroli, J.A, Pleshinger, M.J, Banerjee, S, Kiser, P.D, Golczak, M.
Deposit date:2017-04-11
Release date:2017-07-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Enzyme That Makes You Cry-Crystal Structure of Lachrymatory Factor Synthase from Allium cepa.
ACS Chem. Biol., 12, 2017
7PY4
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BU of 7py4 by Molmil
Cryo-EM structure of ATP8B1-CDC50A in E2P autoinhibited state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, BERYLLIUM TRIFLUORIDE ION, CHOLESTEROL HEMISUCCINATE, ...
Authors:Dieudonne, T, Abad-Herrera, S, Juknaviciute Laursen, M, Lejeune, M, Stock, C, Slimani, K, Jaxel, C, Lyons, J.A, Montigny, C, Gunther Pomorski, T, Nissen, P, Lenoir, G.
Deposit date:2021-10-08
Release date:2022-04-27
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Autoinhibition and regulation by phosphoinositides of ATP8B1, a human lipid flippase associated with intrahepatic cholestatic disorders.
Elife, 11, 2022
1ZGL
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BU of 1zgl by Molmil
Crystal structure of 3A6 TCR bound to MBP/HLA-DR2a
Descriptor: HLA class II histocompatibility antigen, DR alpha chain, Myelin basic protein, ...
Authors:Li, Y, Huang, Y, Lue, J, Quandt, J.A, Martin, R, Mariuzza, R.A.
Deposit date:2005-04-21
Release date:2005-10-18
Last modified:2020-02-19
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of a human autoimmune TCR bound to a myelin basic protein self-peptide and a multiple sclerosis-associated MHC class II molecule.
Embo J., 24, 2005
3PH2
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BU of 3ph2 by Molmil
Structure of the imidazole-adduct of the Phormidium laminosum cytochrome c6 Q51V variant
Descriptor: Cytochrome c6, HEME C, IMIDAZOLE
Authors:Worrall, J.A.R.
Deposit date:2010-11-03
Release date:2011-02-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural and kinetic studies of imidazole binding to two members of the cytochrome c (6) family reveal an important role for a conserved heme pocket residue.
J.Biol.Inorg.Chem., 16, 2011
7PSG
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BU of 7psg by Molmil
Structure of the ligand binding domain of the PacA (ECA2226) chemoreceptor of Pectobacterium atrosepticum SCRI1043 in complex with betaine.
Descriptor: GLYCEROL, Methyl-accepting chemotaxis protein, TRIMETHYL GLYCINE
Authors:Gavira, J.A, Matilla, M.A, Velando, F, Krell, T.
Deposit date:2021-09-23
Release date:2022-05-11
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Chemotaxis of the Human Pathogen Pseudomonas aeruginosa to the Neurotransmitter Acetylcholine.
Mbio, 13, 2022
7PRR
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BU of 7prr by Molmil
Structure of the ligand binding domain of the PctD (PA4633) chemoreceptor of Pseudomonas aeruginosa PAO1 in complex with acetylcholine
Descriptor: ACETYLCHOLINE, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Gavira, J.A, Matilla, M.A, Martin-Mora, D, Krell, T.
Deposit date:2021-09-22
Release date:2022-05-11
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Chemotaxis of the Human Pathogen Pseudomonas aeruginosa to the Neurotransmitter Acetylcholine.
Mbio, 13, 2022
6DXI
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BU of 6dxi by Molmil
Crystal structure of H-NOX protein from Nostoc sp V52W/L67W double-mutant.
Descriptor: H-NOX, PROTOPORPHYRIN IX CONTAINING FE
Authors:Weichsel, A, Kievenaar, J.A, Montfort, W.R.
Deposit date:2018-06-28
Release date:2018-07-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of H-NOX domain from cyanobacteria Nostoc sp
to be published
5W1I
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BU of 5w1i by Molmil
Crystal structure of LbaCas13a (C2c2) bound to mature crRNA (20-nt spacer)
Descriptor: IODIDE ION, LbaCas13a (C2c2), mature crRNA
Authors:Knott, G.J, Doudna, J.A.
Deposit date:2017-06-03
Release date:2017-09-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Guide-bound structures of an RNA-targeting A-cleaving CRISPR-Cas13a enzyme.
Nat. Struct. Mol. Biol., 24, 2017
7PRQ
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BU of 7prq by Molmil
Structure of the ligand binding domain of the PctD (PA4633) chemoreceptor of Pseudomonas aeruginosa PAO1 in complex with choline.
Descriptor: 1,2-ETHANEDIOL, CHOLINE ION, GLYCEROL, ...
Authors:Gavira, J.A, Matilla, M.A, Martin-Mora, D, Krell, T.
Deposit date:2021-09-22
Release date:2022-05-11
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Chemotaxis of the Human Pathogen Pseudomonas aeruginosa to the Neurotransmitter Acetylcholine.
Mbio, 13, 2022
1ZTG
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BU of 1ztg by Molmil
human alpha polyC binding protein KH1
Descriptor: 5'-D(P*CP*CP*CP*TP*CP*CP*CP*T)-3', POLY(RC)-BINDING PROTEIN 1
Authors:Sidiqi, M, Wilce, J.A, Barker, A, Schmidgerger, J, Leedman, P.J, Wilce, M.C.J.
Deposit date:2005-05-27
Release date:2006-05-27
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Contribution of the first K-homology domain of poly(C)-binding protein 1 to its affinity and specificity for C-rich oligonucleotides
Nucleic Acids Res., 40, 2012
6BYS
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BU of 6bys by Molmil
Structures of the PKA RI alpha holoenzyme with the FLHCC driver J-PKAc alpha or native PRKAc alpha
Descriptor: cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase type I-alpha regulatory subunit
Authors:Cao, B, Lu, T.W, Martinez Fiesco, J.A, Tomasini, M, Fan, L, Simon, S.M, Taylor, S.S, Zhang, P.
Deposit date:2017-12-21
Release date:2019-04-03
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (4.75 Å)
Cite:Structures of the PKA RI alpha Holoenzyme with the FLHCC Driver J-PKAc alpha or Wild-Type PKAc alpha.
Structure, 27, 2019
5WFE
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BU of 5wfe by Molmil
Cas1-Cas2-IHF-DNA holo-complex
Descriptor: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (28-MER), ...
Authors:Wright, A.V, Liu, J.J, Nogales, E, Doudna, J.A.
Deposit date:2017-07-11
Release date:2017-08-02
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.64 Å)
Cite:Structures of the CRISPR genome integration complex.
Science, 357, 2017
6BZP
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BU of 6bzp by Molmil
STGGYG from low-complexity domain of FUS, residues 77-82
Descriptor: 2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL, RNA-binding protein FUS
Authors:Hughes, M.P, Rodriguez, J.A, Sawaya, M.R, Cascio, D, Gonen, T, Eisenberg, D.S.
Deposit date:2017-12-25
Release date:2018-04-04
Last modified:2024-03-13
Method:ELECTRON CRYSTALLOGRAPHY (1.1 Å)
Cite:Atomic structures of low-complexity protein segments reveal kinked beta sheets that assemble networks.
Science, 359, 2018

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