Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 42507 results

5CQ4
DownloadVisualize
BU of 5cq4 by Molmil
Crystal structure of the bromodomain of bromodomain adjacent to zinc finger domain protein 2B (BAZ2B) in complex with 3'-Hydroxyacetophenone (SGC - Diamond I04-1 fragment screening)
Descriptor: 1,2-ETHANEDIOL, 1-(3-hydroxyphenyl)ethanone, Bromodomain adjacent to zinc finger domain protein 2B, ...
Authors:Bradley, A, Pearce, N, Krojer, T, Ng, J, Talon, R, Vollmar, M, Jose, B, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2015-07-21
Release date:2015-09-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.782 Å)
Cite:Crystal structure of the second bromodomain of bromodomain adjancent to zinc finger domain protein 2B (BAZ2B) in complex with 3'-Hydroxyacetophenone (SGC - Diamond I04-1 fragment screening)
To be published
8OGO
DownloadVisualize
BU of 8ogo by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry A12
Descriptor: 3-(propan-2-yl)-1,2,4-oxadiazol-5(4H)-one, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry A12
To Be Published
3BS4
DownloadVisualize
BU of 3bs4 by Molmil
Crystal structure of uncharacterized protein PH0321 from Pyrococcus horikoshii in complex with an unknown peptide
Descriptor: Uncharacterized protein PH0321, Unknown peptide
Authors:Bonanno, J.B, Freeman, J, Bain, K.T, Hu, S, Romero, R, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-12-21
Release date:2008-01-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of uncharacterized protein PH0321 from Pyrococcus horikoshii in complex with an unknown peptide.
To be Published
8OGP
DownloadVisualize
BU of 8ogp by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B03
Descriptor: 2-[(1~{S})-1-azanylpropyl]phenol, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B03
To Be Published
6C06
DownloadVisualize
BU of 6c06 by Molmil
Mycobacterium tuberculosis RNAP Holo/RbpA/Fidaxomicin
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Darst, S.A, Campbell, E.A, Boyaci Selcuk, H, Chen, J, Lilic, M.
Deposit date:2017-12-27
Release date:2018-03-28
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (5.15 Å)
Cite:Fidaxomicin jamsMycobacterium tuberculosisRNA polymerase motions needed for initiation via RbpA contacts.
Elife, 7, 2018
8OH0
DownloadVisualize
BU of 8oh0 by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry D08
Descriptor: 1-(2-ethylsulfonylethyl)-1,3,3-trimethyl-urea, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry D08
To Be Published
6BLM
DownloadVisualize
BU of 6blm by Molmil
Crystal Structure of Native Fused 4-OT
Descriptor: 4-oxalocrotonate tautomerase
Authors:LeVieux, J, Baas, B.J, Zhang, Y.J, Whitman, C.P.
Deposit date:2017-11-10
Release date:2017-12-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.488 Å)
Cite:A global view of structure-function relationships in the tautomerase superfamily.
J. Biol. Chem., 293, 2018
8OHC
DownloadVisualize
BU of 8ohc by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry E12
Descriptor: 6-azanyl-3-methyl-1,3-benzoxazol-2-one, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-21
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry E12
To Be Published
8AY2
DownloadVisualize
BU of 8ay2 by Molmil
Crystal structure of the C-terminal part of rat Sec8
Descriptor: Exocyst complex component 4
Authors:Dong, G, Lesigang, J.
Deposit date:2022-09-01
Release date:2023-09-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Sec8 specifically interacts with the PDZ2 domain of synapse associated protein 102 (SAP102).
Front Cell Dev Biol, 11, 2023
8KGS
DownloadVisualize
BU of 8kgs by Molmil
Structure of African swine fever virus topoisomerase II in complex with dsDNA
Descriptor: DNA topoisomerase 2, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Cong, J, Xin, Y, Li, X, Chen, Y.
Deposit date:2023-08-19
Release date:2024-04-03
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (2.603 Å)
Cite:Structural insights into the DNA topoisomerase II of the African swine fever virus.
Nat Commun, 15, 2024
8OGM
DownloadVisualize
BU of 8ogm by Molmil
Crystal structure of CdaA from Bacillus subtilis
Descriptor: Cyclic di-AMP synthase CdaA
Authors:Garbers, T.B, Neumann, P, Weiss, M.S, Wollenhaupt, J, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal structure of CdaA from Bacillus subtilis
To Be Published
3C1B
DownloadVisualize
BU of 3c1b by Molmil
The effect of H3 K79 dimethylation and H4 K20 trimethylation on nucleosome and chromatin structure
Descriptor: Histone 2, H2bf, Histone H2A type 1, ...
Authors:Lu, X, Simon, M, Chodaparambil, J, Hansen, J, Shokat, K, Luger, K.
Deposit date:2008-01-22
Release date:2008-10-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The effect of H3K79 dimethylation and H4K20 trimethylation on nucleosome and chromatin structure.
Nat.Struct.Mol.Biol., 15, 2008
8AXG
DownloadVisualize
BU of 8axg by Molmil
Crystal structure of Fusobacterium nucleatum fusolisin protease
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Fusolisin, ...
Authors:Isupov, M.N, Wiener, R, Rouvinski, A, Fahoum, J, Kumar, M, Read, R.J.
Deposit date:2022-08-31
Release date:2023-09-13
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystal structure of Fusobacterium nucleatum fusolisin protease
To Be Published
5IP7
DownloadVisualize
BU of 5ip7 by Molmil
Structure of RNA Polymerase II-Tfg1 peptide complex
Descriptor: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
Authors:Plaschka, C, Hantsche, M, Dienemann, C, Burzinski, C, Plitzko, J, Cramer, P.
Deposit date:2016-03-09
Release date:2016-05-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.52 Å)
Cite:Transcription initiation complex structures elucidate DNA opening.
Nature, 533, 2016
8JTY
DownloadVisualize
BU of 8jty by Molmil
hOCT1 in complex with nb5660 in inward facing partially open 2 conformation
Descriptor: Solute carrier family 22 member 1, nanobody 56
Authors:Zhang, S, Zhu, A, Kong, F, Chen, J, Lan, B, He, G, Gao, K, Cheng, L, Yan, C, Chen, L, Liu, X.
Deposit date:2023-06-22
Release date:2024-03-27
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Structural insights into human organic cation transporter 1 transport and inhibition.
Cell Discov, 10, 2024
3C3E
DownloadVisualize
BU of 3c3e by Molmil
Crystal structure of 2-phospho-(S)-lactate transferase from Methanosarcina mazei in complex with Fo and GDP. Northeast Structural Genomics Consortium target MaR46
Descriptor: 1-deoxy-1-(8-hydroxy-2,4-dioxo-3,4-dihydropyrimido[4,5-b]quinolin-10(2H)-yl)-D-ribitol, 2-phospho-L-lactate transferase, GUANOSINE-5'-DIPHOSPHATE
Authors:Forouhar, F, Abashidze, M, Xu, H, Grochowski, L.L, Seetharaman, J, Hussain, M, Kuzin, A.P, Chen, Y, Zhou, W, Xiao, R, Acton, T.B, Montelione, G.T, Galinier, A, White, R.H, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-01-28
Release date:2008-02-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Molecular insights into the biosynthesis of the f420 coenzyme.
J.Biol.Chem., 283, 2008
8OGQ
DownloadVisualize
BU of 8ogq by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B06
Descriptor: (1S)-1-(4-nitrophenyl)ethan-1-ol, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B06
To Be Published
8OH1
DownloadVisualize
BU of 8oh1 by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry E04
Descriptor: 3-phenyl-1,2-oxazol-5-amine, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry E04
To Be Published
8KGT
DownloadVisualize
BU of 8kgt by Molmil
Structure of African swine fever virus topoisomerase II in complex with dsDNA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA topoisomerase 2
Authors:Cong, J, Xin, Y, Li, X, Chen, Y.
Deposit date:2023-08-19
Release date:2024-04-03
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into the DNA topoisomerase II of the African swine fever virus.
Nat Commun, 15, 2024
8AY5
DownloadVisualize
BU of 8ay5 by Molmil
Human rhinovirus 2 empty particle in situ
Descriptor: Capsid protein VP1, Capsid protein VP2, VP3
Authors:Ishemgulova, A, Mukhamedova, L, Trebichalska, Z, Payne, P, Smerdova, L, Moravcova, J, Hrebik, D, Buchta, D, Skubnik, K, Fuzik, T, Novacek, J, Plevka, P.
Deposit date:2022-09-01
Release date:2023-09-13
Method:ELECTRON MICROSCOPY (7.1 Å)
Cite:Endosome rupture enables enteroviruses to infect cells.
To Be Published
8OHH
DownloadVisualize
BU of 8ohh by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry G05
Descriptor: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, N-phenyl-N'-propan-2-ylurea
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-21
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry G05
To Be Published
5IR4
DownloadVisualize
BU of 5ir4 by Molmil
Crystal structure of wild-type bacterial lipoxygenase from Pseudomonas aeruginosa PA-LOX with space group C2221 at 1.48 A resolution
Descriptor: (2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradec-5-enoyloxy)propyl (11Z)-octadec-11-enoate, Arachidonate 15-lipoxygenase, CHLORIDE ION, ...
Authors:Kalms, J, Banthiya, S, Galemou Yoga, E, Kuhn, H, Scheerer, P.
Deposit date:2016-03-12
Release date:2016-08-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structural and functional basis of phospholipid oxygenase activity of bacterial lipoxygenase from Pseudomonas aeruginosa.
Biochim.Biophys.Acta, 1861, 2016
5CYW
DownloadVisualize
BU of 5cyw by Molmil
Crystal Structure of Vaccinia Virus C7
Descriptor: GLYCEROL, Interferon antagonist C7
Authors:Krumm, B.E, Meng, X, Li, Y, Xiang, Y, Deng, J.
Deposit date:2015-07-30
Release date:2015-11-18
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for antagonizing a host restriction factor by C7 family of poxvirus host-range proteins.
Proc.Natl.Acad.Sci.USA, 112, 2015
8OGN
DownloadVisualize
BU of 8ogn by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry A09
Descriptor: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, [1,2]thiazolo[5,4-b]pyridin-3-amine
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:CdaA in complex with fragment F2X-Entry A09
To Be Published
8AY4
DownloadVisualize
BU of 8ay4 by Molmil
Human rhinovirus 2 virion in situ
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Ishemgulova, A, Mukhamedova, L, Trebichalska, Z, Payne, P, Smerdova, L, Moravcova, J, Hrebik, D, Buchta, D, Skubnik, K, Fuzik, T, Novacek, J, Plevka, P.
Deposit date:2022-09-01
Release date:2023-09-13
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Endosome rupture enables enteroviruses to infect cells.
To Be Published

223790

건을2024-08-14부터공개중

PDB statisticsPDBj update infoContact PDBjnumon