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PDB: 42507 results

8E0W
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Crystal structure of mouse APCDD1 in P1 space group
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLYCEROL, ...
Authors:Hsieh, F.L, Chang, T.H, Gabelli, S.B, Nathans, J.
Deposit date:2022-08-09
Release date:2023-05-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of WNT inhibitor adenomatosis polyposis coli down-regulated 1 (APCDD1), a cell-surface lipid-binding protein.
Proc.Natl.Acad.Sci.USA, 120, 2023
8DST
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BU of 8dst by Molmil
Cryo-EM of NBD-ffsy filaments (class 2)
Descriptor: NBD-ffsy peptide
Authors:Wang, F, Guo, J, Xu, B, Egelman, E.H.
Deposit date:2022-07-22
Release date:2023-05-31
Last modified:2023-09-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cell spheroid creation by transcytotic intercellular gelation.
Nat Nanotechnol, 18, 2023
8E0R
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BU of 8e0r by Molmil
Crystal structure of mouse APCDD1 in P21 space group
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Protein APCDD1
Authors:Hsieh, F.L, Chang, T.H, Gabelli, S.B, Nathans, J.
Deposit date:2022-08-09
Release date:2023-05-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of WNT inhibitor adenomatosis polyposis coli down-regulated 1 (APCDD1), a cell-surface lipid-binding protein.
Proc.Natl.Acad.Sci.USA, 120, 2023
8DL5
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BU of 8dl5 by Molmil
Crystal structure of PLP-dependent Mannich cyclase LolT
Descriptor: Aminotransferase, class V/Cysteine desulfurase, GLYCEROL
Authors:Gao, J, Hai, Y.
Deposit date:2022-07-06
Release date:2023-06-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A pyridoxal 5'-phosphate-dependent Mannich cyclase.
Nat Catal, 2023
4ABH
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BU of 4abh by Molmil
Fragments bound to bovine trypsin for the SAMPL challenge
Descriptor: 1,2-ETHANEDIOL, 1-(3-PYRROLIDIN-1-YLPHENYL)METHANAMINE, CALCIUM ION, ...
Authors:Newman, J, Peat, T.S.
Deposit date:2011-12-08
Release date:2012-02-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:The Dingo Dataset: A Comprehensive Set of Data for the Sampl Challenge.
J.Comput.Aided Mol.Des., 26, 2012
6NPR
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BU of 6npr by Molmil
Crystal structure of H-2Dd with C84-C139 disulfide in complex with gp120 derived peptide P18-I10
Descriptor: ARG-GLY-PRO-GLY-ARG-ALA-PHE-VAL-THR-ILE, Beta-2-microglobulin, H-2 class I histocompatibility antigen, ...
Authors:Toor, J, McShan, A.C, Tripathi, S.M, Sgourakis, N.G.
Deposit date:2019-01-18
Release date:2020-01-22
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Molecular determinants of chaperone interactions on MHC-I for folding and antigen repertoire selection.
Proc.Natl.Acad.Sci.USA, 116, 2019
4I07
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BU of 4i07 by Molmil
Structure of mature form of cathepsin B1 from Schistosoma mansoni
Descriptor: ACETATE ION, CHLORIDE ION, Cathepsin B-like peptidase (C01 family)
Authors:Rezacova, P, Jilkova, A, Brynda, J, Horn, M, Mares, M.
Deposit date:2012-11-16
Release date:2014-02-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Activation route of the Schistosoma mansoni cathepsin B1 drug target: structural map with a glycosaminoglycan switch
Structure, 22, 2014
421P
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BU of 421p by Molmil
THREE-DIMENSIONAL STRUCTURES OF H-RAS P21 MUTANTS: MOLECULAR BASIS FOR THEIR INABILITY TO FUNCTION AS SIGNAL SWITCH MOLECULES
Descriptor: H-RAS P21 PROTEIN, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
Authors:Krengel, U, John, J, Scherer, A, Kabsch, W, Wittinghofer, A, Pai, E.F.
Deposit date:1991-06-06
Release date:1994-01-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Three-dimensional structures of H-ras p21 mutants: molecular basis for their inability to function as signal switch molecules.
Cell(Cambridge,Mass.), 62, 1990
8E4T
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Crystal structure of the kinase domain of RTKC8 from the choanoflagellate Monosiga brevicollis
Descriptor: PHOSPHATE ION, RTKC8 Kinase domain, STAUROSPORINE
Authors:Bajaj, T, Gee, C.L, Kuriyan, J.
Deposit date:2022-08-18
Release date:2023-06-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of the kinase domain of a receptor tyrosine kinase from a choanoflagellate, Monosiga brevicollis.
Plos One, 18, 2023
1MWK
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BU of 1mwk by Molmil
ParM from plasmid R1 APO form
Descriptor: ParM
Authors:Van den Ent, F, Moller-Jensen, J, Amos, L.A, Gerdes, K, Lowe, J.
Deposit date:2002-09-30
Release date:2003-01-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:F-actin-like filaments formed by plasmid segregation protein ParM
EMBO J., 21, 2002
8DU2
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BU of 8du2 by Molmil
HnRNPA2 D290V LCD PM1
Descriptor: Heterogeneous nuclear ribonucleoproteins A2/B1
Authors:Eisenberg, D.S, Lu, J, Ge, P, Boyer, D.R.
Deposit date:2022-07-26
Release date:2023-08-02
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures of the D290V mutant of the hnRNPA2 low-complexity domain suggests how D290V affects phase separation and aggregation.
J.Biol.Chem., 300, 2023
8DSV
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BU of 8dsv by Molmil
The structure of NicA2 in complex with N-methylmyosmine
Descriptor: DI(HYDROXYETHYL)ETHER, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, FAD-dependent oxidoreductase, ...
Authors:Wu, K, Dulchavsky, M, Li, J, Bardwell, J.C.A.
Deposit date:2022-07-22
Release date:2023-07-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Directed evolution unlocks oxygen reactivity for a nicotine-degrading flavoenzyme.
Nat.Chem.Biol., 19, 2023
8DQ8
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BU of 8dq8 by Molmil
The structure of NicA2 variant F104L/A107T/S146I/G317D/H368R/L449V/N462S in complex with N-methylmyosmine
Descriptor: (S)-3-(1-METHYLPYRROLIDIN-2-YL)PYRIDINE, 1,2-ETHANEDIOL, Amine oxidase, ...
Authors:Wu, K, Dulchavsky, M, Li, J, Bardwell, J.C.A.
Deposit date:2022-07-18
Release date:2023-07-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Directed evolution unlocks oxygen reactivity for a nicotine-degrading flavoenzyme.
Nat.Chem.Biol., 19, 2023
8DQ7
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BU of 8dq7 by Molmil
The structure of NicA2 variant F104L/A107T/S146I/G317D/H368R/L449V/N462S from Pseudomonas putida
Descriptor: Amine oxidase, DIHYDROFLAVINE-ADENINE DINUCLEOTIDE
Authors:Wu, K, Dulchavsky, M, Li, J, Bardwell, J.C.A.
Deposit date:2022-07-18
Release date:2023-07-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Directed evolution unlocks oxygen reactivity for a nicotine-degrading flavoenzyme.
Nat.Chem.Biol., 2023
8DSP
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BU of 8dsp by Molmil
Cryo-EM structure of the proximal half fiber in del7.3K2R1 mature phage
Descriptor: Tail fiber protein
Authors:Wang, C, Liu, J, Molineux, I.J.
Deposit date:2022-07-22
Release date:2023-07-26
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Asymmetric reconstruction of gp8-gp11 with terminal dsDNA associated from the del7.3K2R1.
To Be Published
8DUW
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BU of 8duw by Molmil
HnRNPA2 D290V LCD PM2
Descriptor: Heterogeneous nuclear ribonucleoproteins A2/B1
Authors:Eisenberg, D.S, Lu, J, Ge, P, Boyer, D.R.
Deposit date:2022-07-27
Release date:2023-08-02
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structures of the D290V mutant of the hnRNPA2 low-complexity domain suggests how D290V affects phase separation and aggregation.
J.Biol.Chem., 300, 2023
2NV4
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BU of 2nv4 by Molmil
Crystal structure of UPF0066 protein AF0241 in complex with S-adenosylmethionine. Northeast Structural Genomics Consortium target GR27
Descriptor: ACETATE ION, S-ADENOSYLMETHIONINE, UPF0066 protein AF_0241
Authors:Kuzin, A.P, Abashidze, M, Seetharaman, J, Vorobiev, S.M, Fang, Y, Cunningham, K, Ma, L.C, Xiao, R, Liu, J, Baran, M, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-11-10
Release date:2006-11-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Functional insights from structural genomics.
J.Struct.Funct.Genom., 8, 2007
6LUF
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BU of 6luf by Molmil
Trans-acting mutant Y290A of the central AAA+ domain of the flagellar regulatory protein FlrC
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Flagellar regulatory protein C
Authors:Dasgupta, J, Chakraborty, S.
Deposit date:2020-01-27
Release date:2020-03-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Oligomerization of flagellar regulatory protein FlrC is essential for cis-mediated ATP binding while c-di-GMP prefers its monomeric state
To Be Published
8DLA
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BU of 8dla by Molmil
ClpP2 from Chlamydia trachomatis bound by MAS1-12
Descriptor: 1-{4-[(4-chlorophenyl)methyl]piperazin-1-yl}-2-methyl-2-[5-(trifluoromethyl)pyridine-2-sulfonyl]propan-1-one, ATP-dependent Clp protease proteolytic subunit 2, GLYCEROL, ...
Authors:Azadmanesh, J, Struble, L.R, Seleem, M.A, Ouellette, S, Conda-Sheridan, M, Borgstahl, G.E.O.
Deposit date:2022-07-07
Release date:2023-08-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:The structure of caseinolytic protease subunit ClpP2 reveals a functional model of the caseinolytic protease system from Chlamydia trachomatis.
J.Biol.Chem., 299, 2023
1XGB
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BU of 1xgb by Molmil
ALPHA CONOTOXIN GI: 2-13;3-7 DISULFIDE BOND ISOMER NMR, 24 STRUCTURES
Descriptor: ALPHA-CONOTOXIN GI
Authors:Gehrmann, J, Alewood, P.F, Craik, D.J.
Deposit date:1998-01-18
Release date:1999-02-16
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Structure determination of the three disulfide bond isomers of alpha-conotoxin GI: a model for the role of disulfide bonds in structural stability.
J.Mol.Biol., 278, 1998
2OJW
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BU of 2ojw by Molmil
Crystal structure of human glutamine synthetase in complex with ADP and phosphate
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, GLYCEROL, ...
Authors:Karlberg, T, Uppenberg, J, Arrowsmith, C, Berglund, H, Busam, R.D, Collins, R, Edwards, A, Flodin, S, Flores, A, Graslund, S, Hallberg, B.M, Hammarstrom, M, Hogbom, M, Johansson, I, Kotenyova, T, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Ogg, D, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, Van Den Berg, S, Wallden, K, Weigelt, J, Holmberg-Schiavone, L, Structural Genomics Consortium (SGC)
Deposit date:2007-01-15
Release date:2007-03-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structures of mammalian glutamine synthetases illustrate substrate-induced conformational changes and provide opportunities for drug and herbicide design.
J.Mol.Biol., 375, 2008
1XGC
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BU of 1xgc by Molmil
ALPHA CONOTOXIN GI: 2-3;7-13 DISULFIDE BOND ISOMER, NMR, 25 STRUCTURES
Descriptor: ALPHA-CONOTOXIN GI
Authors:Gehrmann, J, Alewood, P.F, Craik, D.J.
Deposit date:1998-01-18
Release date:1999-02-02
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Structure determination of the three disulfide bond isomers of alpha-conotoxin GI: a model for the role of disulfide bonds in structural stability.
J.Mol.Biol., 278, 1998
1L8O
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BU of 1l8o by Molmil
Molecular basis for the local conformational rearrangement of human phosphoserine phosphatase
Descriptor: L-3-phosphoserine phosphatase, PHOSPHATE ION, SERINE
Authors:Kim, H.Y, Heo, Y.S, Kim, J.H, Park, M.H, Moon, J, Park, S.Y, Lee, T.G, Jeon, Y.H, Ro, S, Hwang, K.Y.
Deposit date:2002-03-21
Release date:2003-04-01
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Molecular basis for the local conformational rearrangement of human phosphoserine phosphatase
J.Biol.Chem., 277, 2002
2O2T
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BU of 2o2t by Molmil
The crystal structure of the 1st PDZ domain of MPDZ
Descriptor: Multiple PDZ domain protein
Authors:Papagrigoriou, E, Gileadi, C, Phillips, C, Johansson, C, Salah, E, Savitsky, P, Gorrec, F, Umeano, C, Berridge, G, Pike, A.C.W, Elkins, J, Edwards, A, Arrowsmith, C, Weigelt, J, Sundstrom, M, Doyle, D.A, Structural Genomics Consortium (SGC)
Deposit date:2006-11-30
Release date:2006-12-12
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The crystal structure of the 1st PDZ domain of MPDZ
To be Published
8EC7
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BU of 8ec7 by Molmil
HnRNPA2 D290V LCD PM3
Descriptor: Heterogeneous nuclear ribonucleoproteins A2/B1
Authors:Eisenberg, D.S, Lu, J, Ge, P, Boyer, D.R.
Deposit date:2022-09-01
Release date:2023-09-06
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structures of the D290V mutant of the hnRNPA2 low-complexity domain suggests how D290V affects phase separation and aggregation.
J.Biol.Chem., 300, 2023

223790

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