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PDB: 42550 results

2OB4
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Human Ubiquitin-Conjugating Enzyme CDC34
Descriptor: Ubiquitin-conjugating enzyme E2-32 kDa complementing
Authors:Neculai, D, Avvakumov, G.V, Xue, S, Walker, J.R, Mackenzie, F, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Sicheri, F, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2006-12-18
Release date:2006-12-26
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A human ubiquitin conjugating enzyme (E2)-HECT E3 ligase structure-function screen.
Mol Cell Proteomics, 11, 2012
6HHT
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BU of 6hht by Molmil
Echovirus 18 Open particle without two pentamers
Descriptor: Echovirus 18 capsid protein 1, Echovirus 18 capsid protein 2, Echovirus 18 capsid protein 3
Authors:Buchta, D, Fuzik, T, Hrebik, D, Levdansky, Y, Moravcova, J, Plevka, P.
Deposit date:2018-08-29
Release date:2019-03-20
Last modified:2019-04-10
Method:ELECTRON MICROSCOPY (4.05 Å)
Cite:Enterovirus particles expel capsid pentamers to enable genome release.
Nat Commun, 10, 2019
2OG2
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BU of 2og2 by Molmil
Crystal structure of chloroplast FtsY from Arabidopsis thaliana
Descriptor: MAGNESIUM ION, MALONATE ION, Putative signal recognition particle receptor
Authors:Chartron, J, Chandrasekar, S, Ampornpan, P.J, Shan, S.
Deposit date:2007-01-04
Release date:2007-12-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the Chloroplast Signal Recognition Particle (SRP) Receptor: Domain Arrangement Modulates SRP-Receptor Interaction.
J.Mol.Biol., 375, 2007
2UWS
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BU of 2uws by Molmil
X-ray high resolution structure of the photosynthetic reaction center from Rb. sphaeroides at pH 6.5 in the charge-separated state
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, FE (III) ION, ...
Authors:Koepke, J, Diehm, R, Fritzsch, G.
Deposit date:2007-03-23
Release date:2007-07-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Ph Modulates the Quinone Position in the Photosynthetic Reaction Center from Rhodobacter Sphaeroides in the Neutral and Charge Separated States.
J.Mol.Biol., 371, 2007
5LOY
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BU of 5loy by Molmil
Helical Assembly of a Designed Anbu Protein
Descriptor: Designed Anbu Protein
Authors:Fuchs, A.C.D, Albrecht, R, Martin, J, Hartmann, M.D.
Deposit date:2016-08-10
Release date:2017-06-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Architecture of the Anbu Complex Reflects an Evolutionary Intermediate at the Origin of the Proteasome System.
Structure, 25, 2017
6HMZ
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BU of 6hmz by Molmil
Crystal Structure of a Single-Domain Cyclophilin from Brassica napus Phloem Sap
Descriptor: Cyclosporin, MAGNESIUM ION, MALONATE ION, ...
Authors:Falke, S, Hanhart, P, Garbe, M, Thiess, M, Betzel, C, Kehr, J.
Deposit date:2018-09-13
Release date:2018-11-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Enzyme activity and structural features of three single-domain phloem cyclophilins from Brassica napus.
Sci Rep, 9, 2019
2UXL
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BU of 2uxl by Molmil
X-ray high resolution structure of the photosynthetic reaction center from Rb. sphaeroides at pH 10 in the neutral state, 2nd dataset
Descriptor: BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, FE (III) ION, ...
Authors:Koepke, J, Diehm, R, Fritzsch, G.
Deposit date:2007-03-28
Release date:2007-07-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Ph Modulates the Quinone Position in the Photosynthetic Reaction Center from Rhodobacter Sphaeroides in the Neutral and Charge Separated States.
J.Mol.Biol., 371, 2007
5LSN
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SINEB2 element of the long non-coding RNA activator of translation AS Uchl1
Descriptor: RNA (29-MER)
Authors:Podbevsek, P, Plavec, J.
Deposit date:2016-09-05
Release date:2017-09-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural determinants of the SINE B2 element embedded in the long non-coding RNA activator of translation AS Uchl1.
Sci Rep, 8, 2018
5LRP
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BU of 5lrp by Molmil
Mopeia Virus Exonuclease domain complexed with Magnesium
Descriptor: MAGNESIUM ION, Nucleoprotein, ZINC ION
Authors:Yekwa, E.L, Khourieh, J, Canard, B, Ferron, F.
Deposit date:2016-08-19
Release date:2017-07-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.941 Å)
Cite:Activity inhibition and crystal polymorphism induced by active-site metal swapping.
Acta Crystallogr D Struct Biol, 73, 2017
2VBS
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BU of 2vbs by Molmil
Riboflavin kinase Mj0056 from Methanocaldococcus jannaschii in complex with PO4
Descriptor: CHLORIDE ION, PHOSPHATE ION, RIBOFLAVIN KINASE, ...
Authors:Hartmann, M.D, Djuranovic, S, Ammelburg, M, Martin, J, Lupas, A.N, Zeth, K.
Deposit date:2007-09-16
Release date:2007-11-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:A Ctp-Dependent Archaeal Riboflavin Kinase Forms a Bridge in the Evolution of Cradle-Loop Barrels.
Structure, 15, 2007
2VDD
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BU of 2vdd by Molmil
Crystal Structure of the Open State of TolC Outer Membrane Component of Mutlidrug Efflux Pumps
Descriptor: CHLORIDE ION, OUTER MEMBRANE PROTEIN TOLC, POTASSIUM ION
Authors:Bavro, V.N, Pietras, Z, Furnham, N, Perez-Cano, L, Fernandez-Recio, J, Pei, X.Y, Truer, R, Misra, R, Luisi, B.
Deposit date:2007-10-04
Release date:2008-04-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Assembly and Channel Opening in a Bacterial Drug Efflux Machine.
Mol.Cell, 30, 2008
2NUP
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BU of 2nup by Molmil
Crystal Structure of the human Sec23a/24a heterodimer, complexed with the SNARE protein Sec22b
Descriptor: Protein transport protein Sec23A, Protein transport protein Sec24A, Vesicle-trafficking protein SEC22b, ...
Authors:Mancias, J.D, Goldberg, J.
Deposit date:2006-11-09
Release date:2007-05-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Transport Signal on Sec22 for Packaging into COPII-Coated Vesicles is a Conformational Epitope
Mol.Cell, 26, 2007
5LY9
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BU of 5ly9 by Molmil
Structure of MITat 1.1
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, Variant surface glycoprotein MITAT 1.1, ...
Authors:Schaefer, C, Bartossek, T, Jones, N, Kuper, J, Kisker, C, Engstler, M.
Deposit date:2016-09-26
Release date:2017-09-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural basis for the shielding function of the dynamic trypanosome variant surface glycoprotein coat.
Nat Microbiol, 2, 2017
5LWP
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BU of 5lwp by Molmil
Discovery of phenoxyindazoles and phenylthioindazoles as RORg inverse agonists
Descriptor: 4-[3-[2-chloranyl-6-(trifluoromethyl)phenoxy]-5-(dimethylcarbamoyl)indazol-1-yl]benzoic acid, Nuclear receptor ROR-gamma
Authors:Ouvry, G, Bouix-Peter, C, Ciesielski, F, Chantalat, L, Christin, O, Comino, C, Duvert, D, Feret, C, Harris, C.S, Luzy, A.-P, Musicki, B, Orfila, D, Pascau, J, Parnet, V, Perrin, A, Pierre, R, Raffin, C, Rival, Y, Taquet, N, Thoreau, E, Hennequin, L.F.
Deposit date:2016-09-19
Release date:2016-11-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Discovery of phenoxyindazoles and phenylthioindazoles as ROR gamma inverse agonists.
Bioorg.Med.Chem.Lett., 26, 2016
2V1Z
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BU of 2v1z by Molmil
Structure of a TEM-1 beta-lactamase insertant allosterically regulated by kanamycin and anions.
Descriptor: BETA-LACTAMASE TEM, ZINC ION
Authors:Evrard, C, Barrios, H, Mathonet, P, Soumillion, P, Fastrez, J, Declercq, J.P.
Deposit date:2007-05-31
Release date:2008-06-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Engineering an Allosteric Binding Site for Aminoglycosides Into Tem1-Beta-Lactamase.
Chembiochem, 12, 2011
6HNL
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BU of 6hnl by Molmil
Selenomethionine derivative of IdmH 96-104 loop truncation variant
Descriptor: Putative polyketide cyclase IdmH
Authors:Drulyte, I, Obajdin, J, Trinh, C, Hemsworth, G.R, Berry, A.
Deposit date:2018-09-16
Release date:2019-11-06
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the putative cyclase IdmH from the indanomycin nonribosomal peptide synthase/polyketide synthase.
Iucrj, 6, 2019
5LY3
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BU of 5ly3 by Molmil
P. calidifontis crenactin in complex with arcadin-2 C-terminal peptide
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin-like protein, Actin/actin family protein
Authors:Izore, T, Lowe, J.
Deposit date:2016-09-23
Release date:2016-11-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crenactin forms actin-like double helical filaments regulated by arcadin-2.
Elife, 5, 2016
2UW1
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BU of 2uw1 by Molmil
Ivy Desaturase Structure
Descriptor: (3R)-3-HYDROXY-5,5-DIMETHYLHEXANOIC ACID, FE (III) ION, PLASTID DELTA4 MULTIFUNCTIONAL ACYL-ACYL CARRIER PROTEIN DESATURASE, ...
Authors:Guy, J.E, Whittle, E, Kumaran, D, Lindqvist, Y, Shanklin, J.
Deposit date:2007-03-15
Release date:2007-05-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The Crystal Structure of the Ivy {Delta}4-16:0-Acp Desaturase Reveals Structural Details of the Oxidized Active Site and Potential Determinants of Regioselectivity.
J.Biol.Chem., 282, 2007
2VA6
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BU of 2va6 by Molmil
X-ray crystal structure of beta secretase complexed with compound 24
Descriptor: (6S)-2-amino-6-(3'-methoxybiphenyl-3-yl)-3,6-dimethyl-5,6-dihydropyrimidin-4(3H)-one, BETA SECRETASE 1, IODIDE ION
Authors:Edwards, P.D, Albert, J.S, Sylvester, M, Aharony, D, Andisik, D, Callaghan, O, Campbell, J.B, Carr, R.A, Chessari, G, Congreve, M, Frederickson, M, Folmer, R.H.A, Geschwindner, S, Koether, G, Kolmodin, K, Krumrine, J, Mauger, R.C, Murray, C.W, Olsson, L.L, Patel, S, Spear, N, Tian, G.
Deposit date:2007-08-30
Release date:2007-11-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Application of Fragment-Based Lead Generation to the Discovery of Novel, Cyclic Amidine Beta-Secretase Inhibitors with Nanomolar Potency, Cellular Activity, and High Ligand Efficiency.
J.Med.Chem., 50, 2007
5M11
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BU of 5m11 by Molmil
Structural and functional probing of PorZ, an essential bacterial surface component of the type-IX secretion system of human oral-microbiomic Porphyromonas gingivalis.
Descriptor: CACODYLATE ION, CALCIUM ION, CHLORIDE ION, ...
Authors:Lasica, A.M, Goulas, T, Mizgalska, D, Zhou, X, Ksiazek, M, Madej, M, Guo, Y, Guevara, T, Nowak, M, Potempa, B, Goel, A, Sztukowska, M, Prabhakar, A.T, Bzowska, M, Widziolek, M, Thogersen, I.B, Enghild, J.J, Simonian, M, Kulczyk, A.W, Nguyen, K.-A, Potempa, J, Gomis-Ruth, F.X.
Deposit date:2016-10-07
Release date:2016-11-09
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and functional probing of PorZ, an essential bacterial surface component of the type-IX secretion system of human oral-microbiomic Porphyromonas gingivalis.
Sci Rep, 6, 2016
2VJX
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BU of 2vjx by Molmil
Structural and biochemical evidence for a boat-like transition state in beta-mannosidases
Descriptor: (3S,4R,5R)-3,4-DIHYDROXY-5-(HYDROXYMETHYL)PIPERIDIN-2-ONE, 1,2-ETHANEDIOL, BETA-MANNOSIDASE, ...
Authors:Tailford, L.E, Offen, W.A, Smith, N.L, Dumon, C, Moreland, C, Gratien, J, Heck, M.P, Stick, R.V, Bleriot, Y, Vasella, A, Gilbert, H.J, Davies, G.J.
Deposit date:2007-12-14
Release date:2008-04-01
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and Biochemical Evidence for a Boat-Like Transition State in Beta-Mannosidases.
Nat.Chem.Biol., 4, 2008
2UX1
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BU of 2ux1 by Molmil
Identification of two zinc-binding sites in the Streptococcus suis Dpr protein
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Havukainen, H, Kauko, A, Pulliainen, A.T, Haataja, S, Meyer-Klaucke, W, Finne, J, Papageorgiou, A.C.
Deposit date:2007-03-26
Release date:2008-05-27
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis of the Zinc- and Terbium-Mediated Inhibition of Ferroxidase Activity in Dps Ferritin- Like Proteins.
Protein Sci., 17, 2008
5M1M
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BU of 5m1m by Molmil
Crystal structure of matrix protein 1 from Influenza C virus (strain C/Ann Arbor/1/1950)
Descriptor: MAGNESIUM ION, Matrix protein 1
Authors:Radzimanowski, J, Weissenhorn, W.
Deposit date:2016-10-09
Release date:2017-02-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Matrix protein M1 from influenza C virus induces tubular membrane invaginations in an in vitro cell membrane model.
Sci Rep, 7, 2017
2PBI
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BU of 2pbi by Molmil
The multifunctional nature of Gbeta5/RGS9 revealed from its crystal structure
Descriptor: GLYCEROL, Guanine nucleotide-binding protein subunit beta 5, Regulator of G-protein signaling 9
Authors:Cheever, M.L, Snyder, J.T, Gershburg, S, Siderovski, D.P, Harden, T.K, Sondek, J.
Deposit date:2007-03-28
Release date:2008-01-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of the multifunctional Gbeta5-RGS9 complex.
Nat.Struct.Mol.Biol., 15, 2008
2V26
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BU of 2v26 by Molmil
Myosin VI (MD) pre-powerstroke state (Mg.ADP.VO4)
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Menetrey, J, Llinas, P, Mukherjea, M, Sweeney, H.L, Houdusse, A.
Deposit date:2007-06-03
Release date:2007-11-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The Structural Basis for the Large Powerstroke of Myosin Vi.
Cell(Cambridge,Mass.), 131, 2007

224004

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