6HHT

Echovirus 18 Open particle without two pentamers

This is a large structure.

Summary for 6HHT

EMDB information0217
DescriptorEchovirus 18 capsid protein 1, Echovirus 18 capsid protein 2, Echovirus 18 capsid protein 3 (3 entities in total)
Functional Keywordsechovirus, echovirus 18, open particle, o-particle, enterovirus, picornavirus, virus, genome release
Biological sourceEchovirus E18
Total number of polymer chains75
Total molecular weight2187763.9
Authors
Buchta, D.,Fuzik, T.,Hrebik, D.,Levdansky, Y.,Moravcova, J.,Plevka, P. (deposition date: 2018-08-29, release date: 2019-03-20, Last modification date: 2019-04-10)
Primary citation
Buchta, D.,Fuzik, T.,Hrebik, D.,Levdansky, Y.,Sukenik, L.,Mukhamedova, L.,Moravcova, J.,Vacha, R.,Plevka, P.
Enterovirus particles expel capsid pentamers to enable genome release.
Nat Commun, 10:1138-1138, 2019
PubMed: 30850609 (PDB entries with the same primary citation)
DOI: 10.1038/s41467-019-09132-x
MImport into Mendeley
Experimental method
ELECTRON MICROSCOPY
?

Structure validation

ClashscoreRamachandran outliersSidechain outliers10 0.5%0MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all EM structures

More Asymmetric unit images

Molmil generated image of 6hht
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Molmil generated image of 6hht
rotated about x axis by 90°
Molmil generated image of 6hht
rotated about y axis by 90°

More Biological unit images

Molmil generated image of 6hht
no rotation
Molmil generated image of 6hht
rotated about x axis by 90°
Molmil generated image of 6hht
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (6hht-assembly1.cif.gz [5.16 MB])