Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 42507 件

5OVI
DownloadVisualize
BU of 5ovi by Molmil
Ras guanine nucleotide exchange factor SOS1 (Rem-cdc25) in complex with small molecule inhibitor BAY-293 (compound 23)
分子名称: 1,2-ETHANEDIOL, 6,7-dimethoxy-2-methyl-~{N}-[(1~{R})-1-[4-[2-(methylaminomethyl)phenyl]thiophen-2-yl]ethyl]quinazolin-4-amine, Son of sevenless homolog 1
著者Hillig, R.C, Sautier, B, Schroeder, J, Moosmayer, D, Hilpmann, A, Stegmann, C.M, Briem, H, Boemer, U, Weiske, J, Badock, V, Petersen, K, Kahmann, J, Wegener, D, Bohnke, N, Eis, K, Graham, K, Wortmann, L, von Nussbaum, F, Bader, B.
登録日2017-08-28
公開日2019-02-06
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Discovery of potent SOS1 inhibitors that block RAS activation via disruption of the RAS-SOS1 interaction.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
4C7K
DownloadVisualize
BU of 4c7k by Molmil
11b-Hydroxysteroid Dehydrogenase Type I in complex with inhibitor
分子名称: 2-ethyl-N-[(1S,3R)-5-oxidanyl-2-adamantyl]-4-[(2R)-oxolan-2-yl]-1,3-thiazole-5-carboxamide, CORTICOSTEROID 11-BETA-DEHYDROGENASE ISOZYME 1, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Goldberg, F.W, Dossetter, A.G, Scott, J.S, Robb, G.R, Boyd, S, Groombridge, S.D, Kemmitt, P.D, Sjogren, T, Morentin Gutierrez, P, de Schoolmeester, J, Swales, J.G, Turnbull, A.V, Wild, M.J.
登録日2013-09-23
公開日2014-03-05
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Optimization of Brain Penetrant 11Beta-Hydroxysteroid Dehydrogenase Type I Inhibitors and in Vivo Testing in Diet- Induced Obese Mice.
J.Med.Chem., 57, 2014
7KHP
DownloadVisualize
BU of 7khp by Molmil
Acyl-enzyme intermediate structure of SARS-CoV-2 Mpro in complex with its C-terminal autoprocessing sequence.
分子名称: 3C-like proteinase, DIMETHYL SULFOXIDE
著者Lee, J, Worrall, L.J, Paetzel, M, Strynadka, N.C.J.
登録日2020-10-21
公開日2020-10-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystallographic structure of wild-type SARS-CoV-2 main protease acyl-enzyme intermediate with physiological C-terminal autoprocessing site.
Nat Commun, 11, 2020
2ZOT
DownloadVisualize
BU of 2zot by Molmil
Crystal structure of human F-spondin reeler domain (fragment 1)
分子名称: Spondin-1
著者Nagae, M, Nogi, T, Takagi, J.
登録日2008-06-07
公開日2008-10-14
最終更新日2016-12-21
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of the F-spondin reeler domain reveals a unique beta-sandwich fold with a deformable disulfide-bonded loop
Acta Crystallogr.,Sect.D, 64, 2008
5CQA
DownloadVisualize
BU of 5cqa by Molmil
Crystal structure of the bromodomain of bromodomain adjacent to zinc finger domain protein 2B (BAZ2B) in complex with N-methyl-2,3-dihydrothieno[3,4-b][1,4]dioxine-5-carboxamide (SGC - Diamond I04-1 fragment screening)
分子名称: 1,2-ETHANEDIOL, Bromodomain adjacent to zinc finger domain protein 2B, N-methyl-2,3-dihydrothieno[3,4-b][1,4]dioxine-5-carboxamide
著者Bradley, A, Pearce, N, Krojer, T, Ng, J, Talon, R, Vollmar, M, Jose, B, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A, Knapp, S, Structural Genomics Consortium (SGC)
登録日2015-07-21
公開日2015-09-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Crystal structure of the second bromodomain of bromodomain adjancent to zinc finger domain protein 2B (BAZ2B) in complex with N-methyl-2,3-dihydrothieno[3,4-b][1,4]dioxine-5-carboxamide (SGC - Diamond I04-1 fragment screening)
To be published
5I1C
DownloadVisualize
BU of 5i1c by Molmil
CRYSTAL STRUCTURE OF HUMAN GERMLINE ANTIBODY IGHV3-23/IGKV3-20
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, FAB HEAVY CHAIN, ...
著者Teplyakov, A, Obmolova, G, Malia, T, Luo, J, Gilliland, G.
登録日2016-02-05
公開日2016-06-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural diversity in a human antibody germline library.
Mabs, 8, 2016
5I1M
DownloadVisualize
BU of 5i1m by Molmil
Yeast V-ATPase average of densities, a subunit segment
分子名称: V-type proton ATPase subunit a, vacuolar isoform
著者Schep, D.G, Zhao, J, Rubinstein, J.L.
登録日2016-02-05
公開日2016-03-09
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Models for the a subunits of the Thermus thermophilus V/A-ATPase and Saccharomyces cerevisiae V-ATPase enzymes by cryo-EM and evolutionary covariance.
Proc.Natl.Acad.Sci.USA, 113, 2016
2ZR1
DownloadVisualize
BU of 2zr1 by Molmil
Agglutinin from Abrus Precatorius
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Agglutinin-1 chain A, Agglutinin-1 chain B
著者Cheng, J, Lu, T.H, Liu, C.L, Lin, J.Y.
登録日2008-08-22
公開日2009-08-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A biophysical elucidation for less toxicity of Agglutinin than Abrin-a from the Seeds of Abrus Precatorius in consequence of crystal structure
J.Biomed.Sci., 17, 2010
2ZPK
DownloadVisualize
BU of 2zpk by Molmil
Crystal structure of P20.1 Fab fragment in complex with its antigen peptide
分子名称: GLYCEROL, IgG1-lambda P20.1 Fab (heavy chain), IgG1-lambda P20.1 Fab (light chain), ...
著者Nogi, T, Sanagawa, T, Takagi, J.
登録日2008-07-16
公開日2008-12-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Novel affinity tag system using structurally defined antibody-tag interaction: application to single-step protein purification
Protein Sci., 17, 2008
8B9Z
DownloadVisualize
BU of 8b9z by Molmil
Drosophila melanogaster complex I in the Active state (Dm1)
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ...
著者Agip, A.A, Chung, I, Sanchez-Martinez, A, Whitworth, A.J, Hirst, J.
登録日2022-10-10
公開日2023-01-18
実験手法ELECTRON MICROSCOPY (3.28 Å)
主引用文献Cryo-EM structures of mitochondrial respiratory complex I from Drosophila melanogaster.
Elife, 12, 2023
2ZV8
DownloadVisualize
BU of 2zv8 by Molmil
Lyn Tyrosine Kinase Domain-AMP-PNP complex
分子名称: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Tyrosine-protein kinase Lyn
著者Williams, N.K, Rossjohn, J.
登録日2008-11-04
公開日2008-11-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structures of the Lyn Protein Tyrosine Kinase Domain in Its Apo- and Inhibitor-bound State
J.Biol.Chem., 284, 2009
8BG0
DownloadVisualize
BU of 8bg0 by Molmil
Amyloid-beta tetrameric filaments with the Arctic mutation (E22G) from Alzheimer's disease brains | ABeta40
分子名称: Amyloid-beta precursor protein
著者Yang, Y, Zhang, W.J, Murzin, A.G, Schweighauser, M, Huang, M, Lovestam, S.K.A, Peak-Chew, S.Y, Macdonald, J, Lavenir, I, Ghetti, B, Graff, C, Kumar, A, Nordber, A, Goedert, M, Scheres, S.H.W.
登録日2022-10-27
公開日2023-01-18
最終更新日2024-07-24
実験手法ELECTRON MICROSCOPY (1.99 Å)
主引用文献Cryo-EM structures of amyloid-beta filaments with the Arctic mutation (E22G) from human and mouse brains.
Acta Neuropathol, 145, 2023
5CQ8
DownloadVisualize
BU of 5cq8 by Molmil
Crystal structure of the bromodomain of bromodomain adjacent to zinc finger domain protein 2B (BAZ2B) in complex with 4'-Hydroxyacetophenone (SGC - Diamond I04-1 fragment screening)
分子名称: 1,2-ETHANEDIOL, Bromodomain adjacent to zinc finger domain protein 2B, P-HYDROXYACETOPHENONE
著者Bradley, A, Pearce, N, Krojer, T, Ng, J, Talon, R, Vollmar, M, Jose, B, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A, Knapp, S, Structural Genomics Consortium (SGC)
登録日2015-07-21
公開日2015-09-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.651 Å)
主引用文献Crystal structure of the second bromodomain of bromodomain adjancent to zinc finger domain protein 2B (BAZ2B) in complex with 4'-Hydroxyacetophenone (SGC - Diamond I04-1 fragment screening)
To be published
2ZVA
DownloadVisualize
BU of 2zva by Molmil
Lyn Tyrosine Kinase Domain-Dasatinib complex
分子名称: N-(2-CHLORO-6-METHYLPHENYL)-2-({6-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]-2-METHYLPYRIMIDIN-4-YL}AMINO)-1,3-THIAZOLE-5-CARBOXAMIDE, Tyrosine-protein kinase Lyn
著者Williams, N.K, Rossjohn, J.
登録日2008-11-04
公開日2008-11-11
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structures of the Lyn Protein Tyrosine Kinase Domain in Its Apo- and Inhibitor-bound State
J.Biol.Chem., 284, 2009
7KJP
DownloadVisualize
BU of 7kjp by Molmil
Disulfide Stabilized Norovirus GI.1 VLP Shell Region
分子名称: Capsid protein VP1
著者Gorman, J, Kwong, P.D.
登録日2020-10-26
公開日2020-12-02
最終更新日2020-12-30
実験手法ELECTRON MICROSCOPY (3.86 Å)
主引用文献Disulfide stabilization of human norovirus GI.1 virus-like particles focuses immune response toward blockade epitopes.
NPJ Vaccines, 5, 2020
8KAB
DownloadVisualize
BU of 8kab by Molmil
Mycobacterium smegmatis 50S ribosomal subunit-HflX complex
分子名称: 23S rRNA, 50S ribosomal protein L10, 50S ribosomal protein L11, ...
著者Srinivasan, K, Banerjee, A, Sengupta, J.
登録日2023-08-02
公開日2024-07-31
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Cryo-EM structures reveal the molecular mechanism of HflX-mediated erythromycin resistance in mycobacteria.
Structure, 2024
8BFZ
DownloadVisualize
BU of 8bfz by Molmil
Amyloid-beta 42 filaments extracted from the human brain with Arctic mutation (E22G) of Alzheimer's disease | ABeta42
分子名称: Amyloid-beta precursor protein
著者Yang, Y, Zhang, W.J, Murzin, A.G, Schweighauser, M, Huang, M, Lovestam, S.K.A, Peak-Chew, S.Y, Macdonald, J, Lavenir, I, Ghetti, B, Graff, C, Kumar, A, Nordberg, A, Goedert, M, Scheres, S.H.W.
登録日2022-10-27
公開日2023-01-18
最終更新日2024-01-31
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Cryo-EM structures of amyloid-beta filaments with the Arctic mutation (E22G) from human and mouse brains.
Acta Neuropathol, 145, 2023
8K8M
DownloadVisualize
BU of 8k8m by Molmil
Crystallographic structure of Lysozyme C from chicken
分子名称: GLYCEROL, Lysozyme C
著者Zheng, P, Shang, G, Jin, J, He, L.
登録日2023-07-31
公開日2024-08-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystallographic structure of Lysozyme C from chicken
To Be Published
5I1A
DownloadVisualize
BU of 5i1a by Molmil
CRYSTAL STRUCTURE OF HUMAN GERMLINE ANTIBODY IGHV3-23/IGKV3-11
分子名称: ACETATE ION, CNTO388 HEAVY CHAIN, CNTO388 LIGHT CHAIN, ...
著者Teplyakov, A, Obmolova, G, Malia, T, Luo, J, Gilliland, G.
登録日2016-02-05
公開日2016-06-08
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural diversity in a human antibody germline library.
Mabs, 8, 2016
8K60
DownloadVisualize
BU of 8k60 by Molmil
Cryo-EM structure of Streptomyces coelicolor transcription initiation complex with the global transcription factor AfsR
分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
著者Lin, W, Shi, J.
登録日2023-07-24
公開日2024-07-31
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural insights into transcription activation of the Streptomyces antibiotic regulatory protein, AfsR
Iscience, 27, 2024
1HJZ
DownloadVisualize
BU of 1hjz by Molmil
Crystal structure of AF1521 protein containing a macroH2A domain
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, HYPOTHETICAL PROTEIN AF1521
著者Allen, M.D, Buckle, A.M, Cordell, S.C, Lowe, J, Bycroft, M.
登録日2003-03-05
公開日2003-07-10
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The Crystal Structure of Af1521 a Protein from Archaeoglobus Fulgidus with Homology to the Non-Histone Domain of Macroh2A
J.Mol.Biol., 330, 2003
8KB8
DownloadVisualize
BU of 8kb8 by Molmil
Structure of the WDR91 WD40 domain complexed with Rab7
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Ras-related protein Rab-7a, ...
著者Li, J, Ma, X.L, Banerjee, S, Dong, Z.G.
登録日2023-08-04
公開日2024-08-07
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Structure of the WDR91 WD40 domain complexed with Rab7
To Be Published
5CQ7
DownloadVisualize
BU of 5cq7 by Molmil
Crystal structure of the bromodomain of bromodomain adjacent to zinc finger domain protein 2B (BAZ2B) in complex with N,N-dimethylquinoxaline-6-carboxamide (SGC - Diamond I04-1 fragment screening)
分子名称: 1,2-ETHANEDIOL, Bromodomain adjacent to zinc finger domain protein 2B, N,N-dimethylquinoxaline-6-carboxamide
著者Bradley, A, Pearce, N, Krojer, T, Ng, J, Talon, R, Vollmar, M, Jose, B, von Delft, F, Bountra, C, Arrowsmith, C.H, Edwards, A, Knapp, S, Structural Genomics Consortium (SGC)
登録日2015-07-21
公開日2015-09-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Crystal structure of the second bromodomain of bromodomain adjancent to zinc finger domain protein 2B (BAZ2B) in complex with N,N-dimethylquinoxaline-6-carboxamide (SGC - Diamond I04-1 fragment screening)
To be published
5I68
DownloadVisualize
BU of 5i68 by Molmil
Alcohol oxidase from Pichia pastoris
分子名称: Alcohol oxidase 1, FLAVIN-ADENINE DINUCLEOTIDE, MAGNESIUM ION
著者Vonck, J, Mills, D.J, Parcej, D.N.
登録日2016-02-16
公開日2016-08-03
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Structure of Alcohol Oxidase from Pichia pastoris by Cryo-Electron Microscopy.
Plos One, 11, 2016
1USQ
DownloadVisualize
BU of 1usq by Molmil
Complex of E. Coli DraE adhesin with Chloramphenicol
分子名称: 1,2-ETHANEDIOL, CHLORAMPHENICOL, DR HEMAGGLUTININ STRUCTURAL SUBUNIT, ...
著者Anderson, K.L, Billington, J, Pettigrew, D, Cota, E, Roversi, P, Simpson, P, Chen, H.A, Urvil, P, Dumerle, L, Barlow, P, Medof, E, Smith, R.A.G, Nowicki, B, Le Bouguenec, C, Lea, S.M, Matthews, S.
登録日2003-11-27
公開日2004-08-31
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献High Resolution Studies of the Afa/Dr Adhesin Drae and its Interaction with Chloramphenicol
J.Biol.Chem., 279, 2004

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon