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PDB: 42507 件

1H8I
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X-ray crystal structure of human alpha-thrombin with a tripeptide phosphonate inhibitor.
分子名称: HIRUDIN I, N-[(benzyloxy)carbonyl]-beta-phenyl-D-phenylalanyl-N-[(1S)-4-methoxy-1-phosphonobutyl]-L-prolinamide, THROMBIN
著者Skordalakes, E, Dodson, G.G, Green, D, Deadman, J.
登録日2001-02-08
公開日2001-03-02
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Inhibition of Human Alpha-Thrombin by a Phosphonate Tripeptide Proceeds Via a Metastable Pentacoordinated Phosphorus Intermediate
J.Mol.Biol., 311, 2001
8J0Y
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Crystal structure of horse spleen L-ferritin at 20deg Celsius.
分子名称: CADMIUM ION, CHLORIDE ION, Ferritin light chain, ...
著者Maity, B, Tian, J, Abe, S, Ueno, T.
登録日2023-04-12
公開日2023-05-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Atomic-Level Insights into a Unique Semi-Clathrate Hydrate Formed in a Confined Environment of Porous Protein Crystal.
Cryst.Growth Des., 23, 2023
3BIN
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Structure of the DAL-1 and TSLC1 (372-383) complex
分子名称: Band 4.1-like protein 3, Cell adhesion molecule 1
著者Busam, R.D, Arrowsmith, C.H, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kallas, A, Karlberg, T, Kotenyova, T, Lehtio, L, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Sagemark, J, Svensson, L, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Weigelt, J, Welin, M, Berglund, H, Persson, C, Hallberg, B.M.
登録日2007-11-30
公開日2008-01-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis of tumor suppressor in lung cancer 1 (TSLC1) binding to differentially expressed in adenocarcinoma of the lung (DAL-1/4.1B)
J.Biol.Chem., 286, 2011
8J0W
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BU of 8j0w by Molmil
Crystal structure of horse spleen L-ferritin at -40deg Celsius.
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
著者Maity, B, Tian, J, Abe, S, Ueno, T.
登録日2023-04-12
公開日2023-05-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Atomic-Level Insights into a Unique Semi-Clathrate Hydrate Formed in a Confined Environment of Porous Protein Crystal.
Cryst.Growth Des., 23, 2023
4EWV
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Crystal structure of GH3.12 in complex with AMPCPP
分子名称: 4-substituted benzoates-glutamate ligase GH3.12, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, MANGANESE (II) ION
著者Zubieta, C, Nanao, M, Jez, J.
登録日2012-04-28
公開日2012-06-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.897 Å)
主引用文献Structural basis for prereceptor modulation of plant hormones by GH3 proteins.
Science, 336, 2012
8J0Z
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Crystal structure of horse spleen L-ferritin at -180deg Celsius cooled from -40deg Celsius.
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
著者Maity, B, Tian, J, Abe, S, Ueno, T.
登録日2023-04-12
公開日2023-05-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Atomic-Level Insights into a Unique Semi-Clathrate Hydrate Formed in a Confined Environment of Porous Protein Crystal.
Cryst.Growth Des., 23, 2023
5IUS
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BU of 5ius by Molmil
Crystal structure of human PD-L1 in complex with high affinity PD-1 mutant
分子名称: CHLORIDE ION, Programmed cell death 1 ligand 1, Programmed cell death protein 1
著者Pascolutti, R, Sun, X, Kao, J, Maute, R, Ring, A.M, Bowman, G.R, Kruse, A.C.
登録日2016-03-18
公開日2016-09-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.889 Å)
主引用文献Structure and Dynamics of PD-L1 and an Ultra-High-Affinity PD-1 Receptor Mutant.
Structure, 24, 2016
8J0V
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Crystal structure of horse spleen L-ferritin at -100deg Celsius.
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
著者Maity, B, Tian, J, Abe, S, Ueno, T.
登録日2023-04-12
公開日2023-05-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Atomic-Level Insights into a Unique Semi-Clathrate Hydrate Formed in a Confined Environment of Porous Protein Crystal.
Cryst.Growth Des., 23, 2023
3BJC
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BU of 3bjc by Molmil
Crystal structure of the PDE5A catalytic domain in complex with a novel inhibitor
分子名称: 5-ethoxy-4-(1-methyl-7-oxo-3-propyl-6,7-dihydro-1H-pyrazolo[4,3-d]pyrimidin-5-yl)thiophene-2-sulfonamide, MAGNESIUM ION, ZINC ION, ...
著者Chen, G, Wang, H, Howard, R, Cai, J, Wan, Y, Ke, H.
登録日2007-12-03
公開日2008-04-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献An insight into the pharmacophores of phosphodiesterase-5 inhibitors from synthetic and crystal structural studies
BIOCHEM.PHARM., 75, 2008
8J11
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Crystal structure of horse spleen L-ferritin at 0deg Celsius.
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
著者Maity, B, Tian, J, Abe, S, Ueno, T.
登録日2023-04-12
公開日2023-05-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Atomic-Level Insights into a Unique Semi-Clathrate Hydrate Formed in a Confined Environment of Porous Protein Crystal.
Cryst.Growth Des., 23, 2023
5DRU
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BU of 5dru by Molmil
Structure of His387Ala mutant of the propionaldehyde dehydrogenase from the Clostridium phytofermentans fucose utilisation bacterial microcompartment
分子名称: Aldehyde Dehydrogenase, SULFATE ION
著者Tuck, L.R, Altenbach, K, Fu, A.T, Crawshaw, A.D, Campopiano, D.J, Clarke, D.J, Marles-Wright, J.
登録日2015-09-16
公開日2016-03-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.083 Å)
主引用文献Insight into Coenzyme A cofactor binding and the mechanism of acyl-transfer in an acylating aldehyde dehydrogenase from Clostridium phytofermentans.
Sci Rep, 6, 2016
8J0X
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BU of 8j0x by Molmil
Crystal structure of horse spleen L-ferritin at -20deg Celsius.
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
著者Maity, B, Tian, J, Abe, S, Ueno, T.
登録日2023-04-12
公開日2023-05-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Atomic-Level Insights into a Unique Semi-Clathrate Hydrate Formed in a Confined Environment of Porous Protein Crystal.
Cryst.Growth Des., 23, 2023
3BED
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BU of 3bed by Molmil
Mannose/sorbose specific IIA subunit of phosphotransferase system from Enterococcus faecalis
分子名称: PTS system, IIA component
著者Osipiuk, J, Wu, R, Moy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2007-11-16
公開日2007-11-27
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献X-Ray Crystal Structure of Mannose/sorbose specific IIa subunit of phosphotransferase system from Enterococcus faecalis.
To be Published
8J10
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BU of 8j10 by Molmil
Crystal structure of horse spleen L-ferritin at -180deg Celsius cooled from -20deg Celsius.
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
著者Maity, B, Tian, J, Abe, S, Ueno, T.
登録日2023-04-12
公開日2023-05-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Atomic-Level Insights into a Unique Semi-Clathrate Hydrate Formed in a Confined Environment of Porous Protein Crystal.
Cryst.Growth Des., 23, 2023
5DLL
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BU of 5dll by Molmil
Aminopeptidase N (pepN) from Francisella tularensis subsp. tularensis SCHU S4
分子名称: Aminopeptidase N, CHLORIDE ION, PHOSPHATE ION, ...
著者Borek, D, Raczynska, J, Dubrovska, I, Grimshaw, S, Minasov, G, Shuvalova, L, Kwon, K, Anderson, W.F, Otwinowski, Z, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2015-09-07
公開日2015-09-16
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Aminopeptidase N (pepN) from Francisella tularensis subsp. tularensis SCHU S4
To Be Published
8J0U
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BU of 8j0u by Molmil
Crystal structure of horse spleen L-ferritin A115T mutant at -180deg Celsius.
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
著者Maity, B, Tian, J, Abe, S, Ueno, T.
登録日2023-04-12
公開日2023-05-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Atomic-Level Insights into a Unique Semi-Clathrate Hydrate Formed in a Confined Environment of Porous Protein Crystal.
Cryst.Growth Des., 23, 2023
8J16
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BU of 8j16 by Molmil
Crystal structure of horse spleen L-ferritin at -80deg Celsius.
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
著者Maity, B, Tian, J, Abe, S, Ueno, T.
登録日2023-04-12
公開日2023-05-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Atomic-Level Insights into a Unique Semi-Clathrate Hydrate Formed in a Confined Environment of Porous Protein Crystal.
Cryst.Growth Des., 23, 2023
4ROJ
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BU of 4roj by Molmil
Crystal Structure of the VAV2 SH2 domain in complex with TXNIP phosphorylated peptide
分子名称: Guanine nucleotide exchange factor VAV2, Thioredoxin-interacting protein, UNKNOWN ATOM OR ION
著者Liu, Y, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2014-10-28
公開日2014-12-10
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal Structure of the VAV2 SH2 domain in complex with TXNIP phosphorylated peptide
TO BE PUBLISHED
5IVW
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BU of 5ivw by Molmil
Human core TFIIH bound to DNA within the PIC
分子名称: General transcription factor IIH subunit 2, General transcription factor IIH subunit 3, General transcription factor IIH subunit 4, ...
著者He, Y, Yan, C, Fang, J, Inouye, C, Tjian, R, Ivanov, I, Nogales, E.
登録日2016-03-21
公開日2016-05-18
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献Near-atomic resolution visualization of human transcription promoter opening.
Nature, 533, 2016
1HAZ
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BU of 1haz by Molmil
Snapshots of serine protease catalysis: (C) acyl-enzyme intermediate between porcine pancreatic elastase and human beta-casomorphin-7 jumped to pH 9 for 1 minute
分子名称: BETA-CASOMORPHIN-7, CALCIUM ION, ELASTASE 1, ...
著者Wilmouth, R.C, Edman, K, Neutze, R, Wright, P.A, Clifton, I.J, Schneider, T.R, Schofield, C.J, Hajdu, J.
登録日2001-04-10
公開日2001-08-02
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献X-Ray Snapshots of Serine Protease Catalysis Reveal a Tetrahedral Intermediate
Nat.Struct.Biol., 8, 2001
5JM0
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BU of 5jm0 by Molmil
Structure of the S. cerevisiae alpha-mannosidase 1
分子名称: Alpha-mannosidase,Alpha-mannosidase,Alpha-mannosidase
著者Schneider, S, Kosinski, J, Jakobi, A.J, Hagen, W.J.H, Sachse, C.
登録日2016-04-28
公開日2016-06-15
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (6.3 Å)
主引用文献Higher-order assemblies of oligomeric cargo receptor complexes form the membrane scaffold of the Cvt vesicle.
Embo Rep., 17, 2016
3B5S
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BU of 3b5s by Molmil
Minimally Hinged Hairpin Ribozyme Incorporates A38DAP Mutation and 2'-O-methyl Modification at the Active Site
分子名称: 29-mer Loop A and Loop B Ribozyme strand, COBALT HEXAMMINE(III), Loop A Substrate strand, ...
著者MacElrevey, C, Krucinska, J, Wedekind, J.E.
登録日2007-10-26
公開日2008-08-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural effects of nucleobase variations at key active site residue Ade38 in the hairpin ribozyme.
Rna, 14, 2008
3B60
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BU of 3b60 by Molmil
Crystal Structure of MsbA from Salmonella typhimurium with AMPPNP, higher resolution form
分子名称: Lipid A export ATP-binding/permease protein msbA, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Ward, A, Reyes, C.L, Yu, J, Roth, C.B, Chang, G.
登録日2007-10-26
公開日2007-12-04
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.7 Å)
主引用文献Flexibility in the ABC transporter MsbA: Alternating access with a twist.
Proc.Natl.Acad.Sci.Usa, 104, 2007
3BH8
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Crystal Structure of RQA_M Phosphopeptide Bound to HUMAN Class I MHC HLA-A2
分子名称: 1,2-ETHANEDIOL, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
著者Mohammed, F, Cobbold, M, Zarling, A.L, Salim, M, Barrett-Wilt, G.A, Shabanowitz, J, Hunt, D.F, Engelhard, V.H, Willcox, B.E.
登録日2007-11-28
公開日2008-10-21
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Phosphorylation-dependent interaction between antigenic peptides and MHC class I: a molecular basis for the presentation of transformed self
Nat.Immunol., 9, 2008
3LH1
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BU of 3lh1 by Molmil
Q191A mutant of the DegS-deltaPDZ
分子名称: Protease degS
著者Sohn, J, Grant, R.A, Sauer, R.T.
登録日2010-01-21
公開日2010-08-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.507 Å)
主引用文献Allostery is an intrinsic property of the protease domain of DegS: implications for enzyme function and evolution.
J.Biol.Chem., 285, 2010

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件を2024-08-14に公開中

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