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PDB: 42880 件
4LL4
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BU of 4ll4 by Molmil
The structure of the TRX and TXNIP complex
分子名称: Thioredoxin, Thioredoxin-interacting protein
著者Hwang, J, Kim, M.H.
登録日2013-07-09
公開日2014-02-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The structural basis for the negative regulation of thioredoxin by thioredoxin-interacting protein
Nat Commun, 5, 2014
7V2N
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BU of 7v2n by Molmil
T.thermophilus 30S ribosome with KsgA, class K2
分子名称: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Raina, R, Singh, J, Anand, R, Vinothkumar, K.R.
登録日2021-08-09
公開日2022-04-06
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
6PCT
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BU of 6pct by Molmil
E. coli 50S ribosome bound to compound 41q
分子名称: (2S)-2-[(3S,4R,5E,10E,12E,14S,26aR)-14-hydroxy-4,12-dimethyl-1,7,16,22-tetraoxo-4,7,8,9,14,15,16,17,24,25,26,26a-dodecahydro-1H,3H,22H-21,18-(azeno)pyrrolo[2,1-c][1,8,4,19]dioxadiazacyclotetracosin-3-yl]propyl isoquinolin-3-ylcarbamate, 23S ribosomal RNA, 50S ribosomal protein L13, ...
著者Pellegrino, J, Lee, D.J, Fraser, J.S, Seiple, I.B.
登録日2019-06-18
公開日2020-06-17
最終更新日2020-10-07
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Synthetic group A streptogramin antibiotics that overcome Vat resistance.
Nature, 586, 2020
3ZMM
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BU of 3zmm by Molmil
Inhibitors of Jak2 Kinase domain
分子名称: 5-FLUORO-4-[(1S)-1-(5-FLUOROPYRIMIDIN-2-YL)ETHOXY]-N-(5-METHYL-1H-PYRAZOL-3-YL)-6-MORPHOLINO-PYRIMIDIN-2-AMINE, ACETYL GROUP, TYROSINE-PROTEIN KINASE JAK2
著者Read, J, Green, I, Pollard, H, Howard, T, Mott, R.
登録日2013-02-11
公開日2013-04-17
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Discovery of Novel Jak2-Stat Pathway Inhibitors with Extended Residence Time on Target.
Bioorg.Med.Chem.Lett., 23, 2013
7V2Q
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BU of 7v2q by Molmil
T.thermophilus 30S ribosome with KsgA, class K6
分子名称: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Raina, R, Singh, J, Anand, R, Vinothkumar, K.R.
登録日2021-08-09
公開日2022-04-06
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
2NXZ
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BU of 2nxz by Molmil
HIV-1 gp120 Envelope Glycoprotein (T257S, S334A, S375W) Complexed with CD4 and Antibody 17b
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIBODY 17B, ...
著者Zhou, T, Xu, L, Dey, B, Hessell, A.J, Van Ryk, D, Xiang, S.H, Yang, X, Zhang, M.Y, Zwick, M.B, Arthos, J, Burton, D.R, Dimitrov, D.S, Sodroski, J, Wyatt, R, Nabel, G.J, Kwong, P.D.
登録日2006-11-20
公開日2007-02-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Structural definition of a conserved neutralization epitope on HIV-1 gp120.
Nature, 445, 2007
7V2O
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T.thermophilus 30S ribosome with KsgA, class K4
分子名称: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Raina, R, Singh, J, Anand, R, Vinothkumar, K.R.
登録日2021-08-09
公開日2022-04-06
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
6PED
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BU of 6ped by Molmil
Crystal structure of HEMK2-TRMT112 complex
分子名称: Methyltransferase N6AMT1, Multifunctional methyltransferase subunit TRM112-like protein, S-ADENOSYL-L-HOMOCYSTEINE, ...
著者Dong, C, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2019-06-20
公開日2019-07-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of HEMK2-TRMT112 complex
To Be Published
4D3Y
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BU of 4d3y by Molmil
The structure of inactive prolegumain from chinese hamster.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, LEGUMAIN
著者Li, W, Heinz, D.W, Krausze, J.
登録日2014-10-24
公開日2016-01-20
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A Detailed Look Into Chinese Hamster Legumain Active Site Structure and Exploration of its Function
To be Published
6PFU
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BU of 6pfu by Molmil
rsEGFP2 with a chlorinated chromophore in the non-fluorescent off-state in a contracted unit cell
分子名称: Green fluorescent protein, SULFATE ION
著者Chang, J, Romei, M.G, Boxer, S.G.
登録日2019-06-22
公開日2019-08-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.619 Å)
主引用文献Structural Evidence of Photoisomerization Pathways in Fluorescent Proteins.
J.Am.Chem.Soc., 141, 2019
8BK0
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BU of 8bk0 by Molmil
Crystal structure of human Ephrin type-A receptor 2 (EPHA2) Kinase domain in complex with LDN-211904
分子名称: 1,2-ETHANEDIOL, Ephrin type-A receptor 2, ~{N}-(2-chlorophenyl)-6-piperidin-4-yl-imidazo[1,2-a]pyridine-3-carboxamide
著者Zhubi, R, Gerninghaus, J, Knapp, S, Kraemer, A, Structural Genomics Consortium (SGC)
登録日2022-11-08
公開日2022-11-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of human Ephrin type-A receptor 2 (EPHA2) Kinase domain in complex with LDN-211904
To Be Published
7V2M
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BU of 7v2m by Molmil
T.thermophilus 30S ribosome with KsgA, class K1k4
分子名称: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Raina, R, Singh, J, Anand, R, Vinothkumar, K.R.
登録日2021-08-09
公開日2022-04-06
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
4D5P
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BU of 4d5p by Molmil
Hypocrea jecorina cellobiohydrolase Cel7A E217Q soaked with xylopentaose.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CELLULOSE 1,4-BETA-CELLOBIOSIDASE, COBALT (II) ION, ...
著者Momeni, M.H, Ubhayasekera, W, Stahlberg, J, Hansson, H.
登録日2014-11-07
公開日2015-03-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structural Insights Into the Inhibition of Cellobiohydrolase Cel7A by Xylooligosaccharides.
FEBS J., 282, 2015
2O1E
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BU of 2o1e by Molmil
Crystal Structure of the Metal-dependent Lipoprotein YcdH from Bacillus subtilis, Northeast Structural Genomics Target SR583
分子名称: MANGANESE (II) ION, YcdH
著者Forouhar, F, Zhou, W, Seetharaman, J, Chen, C.X, Fang, Y, Cunningham, K, Ma, L.-C, Janjua, H, Xiao, R, Baran, M.C, Liu, J, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2006-11-28
公開日2006-12-12
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structure of the Metal-dependent Lipoprotein YcdH from Bacillus subtilis, Northeast Structural Genomics Target SR583
To be Published
6OI8
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BU of 6oi8 by Molmil
Crystal Structure of Haemophilus Influenzae Biotin Carboxylase Complexed with 7-((1R,5S,6s)-6-amino-3-azabicyclo[3.1.0]hexan-3-yl)-6-(2-chloro-6-(pyridin-3-yl)phenyl)pyrido[2,3-d]pyrimidin-2-amine
分子名称: 1,2-ETHANEDIOL, 7-[(1R,5S,6s)-6-amino-3-azabicyclo[3.1.0]hexan-3-yl]-6-[2-chloro-6-(pyridin-3-yl)phenyl]pyrido[2,3-d]pyrimidin-2-amine, Biotin carboxylase
著者Andrews, L.D, Kane, T.R, Dozzo, P, Haglund, C.M, Hilderbrandt, D.J, Linsell, M.S, Machajewski, T, McEnroe, G, Serio, A.W, Wlasichuk, K.B, Neau, D.B, Pakhomova, S, Waldrop, G.L, Sharp, M, Pogliano, J, Cirz, R, Cohen, F.
登録日2019-04-09
公開日2019-07-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Optimization and Mechanistic Characterization of Pyridopyrimidine Inhibitors of Bacterial Biotin Carboxylase.
J.Med.Chem., 62, 2019
7V2P
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BU of 7v2p by Molmil
T.thermophilus 30S ribosome with KsgA, class K5
分子名称: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Raina, R, Singh, J, Anand, R, Vinothkumar, K.R.
登録日2021-08-09
公開日2022-04-06
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
6O57
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BU of 6o57 by Molmil
Crystal Structure of multi-drug resistant HIV-1 protease PR-S17 with a substrate analog p2-NC in P41
分子名称: FORMIC ACID, HIV-1 protease, N-{(2S)-2-[(N-acetyl-L-threonyl-L-isoleucyl)amino]hexyl}-L-norleucyl-L-glutaminyl-N~5~-[amino(iminio)methyl]-L-ornithinamide
著者Wang, Y.-F, Agniswamy, J, Weber, I.T.
登録日2019-03-01
公開日2019-06-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Highly Drug-Resistant HIV-1 Protease Mutant PRS17 Shows Enhanced Binding to Substrate Analogues.
Acs Omega, 4, 2019
8BA5
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BU of 8ba5 by Molmil
Crystal structure of the DNMT3A ADD domain
分子名称: 1,2-ETHANEDIOL, DNA (cytosine-5)-methyltransferase 3A, MAGNESIUM ION, ...
著者Linhard, V, Kunert, S, Wollenhaupt, J, Broehm, A, Schwalbe, H, Jeltsch, A.
登録日2022-10-11
公開日2022-11-23
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献The MECP2-TRD domain interacts with the DNMT3A-ADD domain at the H3-tail binding site.
Protein Sci., 32, 2023
7V2L
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BU of 7v2l by Molmil
T.thermophilus 30S ribosome with KsgA, class K1k2
分子名称: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Raina, R, Singh, J, Anand, R, Vinothkumar, K.R.
登録日2021-08-09
公開日2022-04-06
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
5UCS
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BU of 5ucs by Molmil
Class II fructose-1,6-bisphosphate aldolase E149A variant of Helicobacter pylori
分子名称: Fructose-bisphosphate aldolase, SODIUM ION, ZINC ION
著者Jacques, B, Sygusch, J.
登録日2016-12-22
公開日2018-04-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.408 Å)
主引用文献Active site remodeling during the catalytic cycle in metal-dependent fructose-1,6-bisphosphate aldolases.
J. Biol. Chem., 293, 2018
6O6P
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BU of 6o6p by Molmil
Structure of the regulator FasR from Mycobacterium tuberculosis in complex with DNA
分子名称: DNA-forward, DNA-reverse, TetR family transcriptional regulator
著者Larrieux, N, Trajtenberg, F, Lara, J, Gramajo, H, Buschiazzo, A.
登録日2019-03-07
公開日2020-03-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.851 Å)
主引用文献Mycobacterium tuberculosis FasR senses long fatty acyl-CoA through a tunnel and a hydrophobic transmission spine.
Nat Commun, 11, 2020
4D5J
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BU of 4d5j by Molmil
Hypocrea jecorina cellobiohydrolase Cel7A E217Q soaked with xylotriose.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CELLULOSE 1,4-BETA-CELLOBIOSIDASE, COBALT (II) ION, ...
著者Momeni, M.H, Ubhayasekera, W, Stahlberg, J, Hansson, H.
登録日2014-11-05
公開日2015-03-25
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Insights Into the Inhibition of Cellobiohydrolase Cel7A by Xylooligosaccharides.
FEBS J., 282, 2015
5UE3
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BU of 5ue3 by Molmil
proMMP-9desFnII
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, Matrix metalloproteinase-9, ...
著者Alexander, R.S, Spurlino, J, Milligan, C.
登録日2016-12-29
公開日2017-09-13
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.599 Å)
主引用文献Discovery of a highly selective chemical inhibitor of matrix metalloproteinase-9 (MMP-9) that allosterically inhibits zymogen activation.
J. Biol. Chem., 292, 2017
6OC5
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BU of 6oc5 by Molmil
Lanthanide-dependent methanol dehydrogenase XoxF from Methylobacterium extorquens, in complex with Lanthanum
分子名称: LANTHANUM (III) ION, Lanthanide-dependent methanol dehydrogenase XoxF
著者Fellner, M, Good, N.M, Martinez-Gomez, N.C, Hausinger, R.P, Hu, J.
登録日2019-03-21
公開日2020-05-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Lanthanide-dependent alcohol dehydrogenases require an essential aspartate residue for metal coordination and enzymatic function.
J.Biol.Chem., 295, 2020
4H52
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Wild-type influenza N2 neuraminidase covalent complex with 3-fluoro-Neu5Ac
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5-acetamido-3,5-dideoxy-3-fluoro-D-erythro-alpha-L-manno-non-2-ulopyranosonic acid, CALCIUM ION, ...
著者Vavricka, C.J, Liu, Y, Kiyota, H, Sriwilaijaroen, N, Qi, J, Tanaka, K, Wu, Y, Li, Q, Li, Y, Yan, J, Suzuki, Y, Gao, G.F.
登録日2012-09-18
公開日2013-02-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.803 Å)
主引用文献Influenza neuraminidase operates via a nucleophilic mechanism and can be targeted by covalent inhibitors
Nat Commun, 4, 2013

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