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PDB: 42507 件

7NYI
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BacSp222 bacteriocin: succinyl-K20 form
分子名称: Bacteriocin BacSp222
著者Nowakowski, M, Mak, P, Smialek, J.
登録日2021-03-22
公開日2021-07-07
最終更新日2021-07-14
実験手法SOLUTION NMR
主引用文献Structure, Biosynthesis, and Biological Activity of Succinylated Forms of Bacteriocin BacSp222.
Int J Mol Sci, 22, 2021
3ZRQ
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Crystal structure and substrate specificity of a thermophilic archaeal serine : pyruvate aminotransferase from Sulfolobus solfataricus
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, SERINE-PYRUVATE AMINOTRANSFERASE (AGXT)
著者Sayer, C, Bommer, M, Isupov, M.N, Ward, J, Littlechild, J.
登録日2011-06-17
公開日2012-06-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure and Substrate Specificity of the Thermophilic Serine:Pyruvate Aminotransferase from Sulfolobus Solfataricus
Acta Crystallogr.,Sect.D, 68, 2012
1T01
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Vinculin complexed with the VBS1 helix from talin
分子名称: Talin 1, unnamed protein product
著者Papagrigoriou, E, Gingras, A.R, Barsukov, I.L, Critchley, D.R, Emsley, J.
登録日2004-04-07
公開日2004-08-24
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Activation of a vinculin-binding site in the talin rod involves rearrangement of a five-helix bundle
Embo J., 23, 2004
7O30
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Crystal structure of the anti-PAS Fab 1.1 in complex with its epitope peptide
分子名称: PAS#1 epitope peptide, anti-PAS Fab 1.1 chimeric heavy chain, anti-PAS Fab 1.1 chimeric light chain
著者Schilz, J, Schiefner, A, Skerra, A.
登録日2021-04-01
公開日2021-07-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Molecular recognition of structurally disordered Pro/Ala-rich sequences (PAS) by antibodies involves an Ala residue at the hot spot of the epitope.
J.Mol.Biol., 433, 2021
5U7I
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PDE2 catalytic domain complexed with inhibitors
分子名称: 4-[3-(4-methoxyphenoxy)azetidin-1-yl]-1-methyl-3-(2-methylpropyl)-1H-pyrazolo[3,4-d]pyrimidine, MAGNESIUM ION, ZINC ION, ...
著者Pandit, J.
登録日2016-12-12
公開日2017-06-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Application of Structure-Based Design and Parallel Chemistry to Identify a Potent, Selective, and Brain Penetrant Phosphodiesterase 2A Inhibitor.
J. Med. Chem., 60, 2017
3DL3
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Crystal structure of the tellurite resistance protein TehB. Northeast Structural Genomics Consortium target VfR98 .
分子名称: Tellurite resistance protein B
著者Kuzin, A.P, Su, M, Seetharaman, J, Wang, D, Mao, L, Maglaqui, M, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2008-06-26
公開日2008-08-26
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of the tellurite resistance protein TehB. Northeast Structural Genomics Consortium target VfR98.
To be Published
1H2O
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SOLUTION STRUCTURE OF THE MAJOR CHERRY ALLERGEN PRU AV 1 MUTANT E45W
分子名称: MAJOR ALLERGEN PRU AV 1
著者Neudecker, P, Lehmann, K, Nerkamp, J, Schweimer, K, Sticht, H, Boehm, M, Scheurer, S, Vieths, S, Roesch, P.
登録日2002-08-12
公開日2003-08-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Mutational Epitope Analysis of Pru Av 1 and Api G 1, the Major Allergens of Cherry (Prunus Avium) and Celery (Apium Graveolens): Correlating Ige Reactivity with Three-Dimensional Structure
Biochem.J., 376, 2003
3DM6
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Beta-secretase 1 complexed with statine-based inhibitor
分子名称: 5-[[(2S)-2-[[(3R,4S)-5-(3,5-difluorophenoxy)-3-hydroxy-4-[[3-(methyl-methylsulfonyl-amino)-5-[[(1R)-1-phenylethyl]carbamoyl]phenyl]carbonylamino]pentanoyl]amino]-3-methyl-butanoyl]amino]benzene-1,3-dicarboxylic acid, Beta-secretase 1, ISOPROPYL ALCOHOL
著者Lindberg, J, Borkakoti, N, Nystrom, S.
登録日2008-06-30
公開日2008-12-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Design, synthesis and SAR of potent statine-based BACE-1 inhibitors: exploration of P1 phenoxy and benzyloxy residues
Bioorg.Med.Chem., 16, 2008
7O4H
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BU of 7o4h by Molmil
The structure of the native CNGA1/CNGB1 CNG channel from retinal rods
分子名称: Cyclic nucleotide-gated cation channel beta-1, cGMP-gated cation channel alpha-1
著者Barret, D.C.A, Marino, J.
登録日2021-04-06
公開日2022-01-12
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献The structure of the native CNGA1/CNGB1 CNG channel from bovine retinal rods.
Nat.Struct.Mol.Biol., 29, 2022
5Z6O
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Crystal structure of Penicillium cyclopium protease
分子名称: CALCIUM ION, phenylmethanesulfonic acid, protease
著者Ko, T.-P, Koszelak, S, Ng, J, Day, J, Greenwood, A, McPherson, A.
登録日2018-01-24
公開日2018-02-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The crystallographic structure of the subtilisin protease from Penicillium cyclopium.
Biochemistry, 36, 1997
2PSB
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Crystal structure of YerB protein from Bacillus subtilis. NorthEast Structural Genomics target SR586
分子名称: YerB protein
著者Seetharaman, J, Chen, Y, Forouhar, F, Wang, D, Fang, Y, Cunningham, K, Ma, L.-C, Xia, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2007-05-04
公開日2007-05-15
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of YerB protein from Bacillus subtilis.
To be Published
1T3E
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BU of 1t3e by Molmil
Structural basis of dynamic glycine receptor clustering
分子名称: 49-mer fragment of Glycine receptor beta chain, Gephyrin, SULFATE ION
著者Sola, M, Bavro, V.N, Timmins, J, Franz, T, Ricard-Blum, S, Schoehn, G, Ruigrok, R.W.H, Paarmann, I, Saiyed, T, O'Sullivan, G.A.
登録日2004-04-26
公開日2004-07-27
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Structural basis of dynamic glycine receptor clustering by gephyrin
Embo J., 23, 2004
2PWT
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Crystal structure of the bacterial ribosomal decoding site complexed with aminoglycoside containing the L-HABA group
分子名称: 22-mer of the ribosomal decoding site, DOUBLY FUNCTIONALIZED PAROMOMYCIN PM-II-162
著者Kondo, J, Pachamuthu, K, Francois, B, Szychowski, J, Hanessian, S, Westhof, E.
登録日2007-05-13
公開日2007-09-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of the Bacterial Ribosomal Decoding Site Complexed with a Synthetic Doubly Functionalized Paromomycin Derivative: a New Specific Binding Mode to an A-Minor Motif Enhances in vitro Antibacterial Activity
Chemmedchem, 2, 2007
3DPR
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BU of 3dpr by Molmil
Human rhinovirus 2 bound to a concatamer of the VLDL receptor module V3
分子名称: CALCIUM ION, LAURIC ACID, LDL-receptor class A 3, ...
著者Querol-Audi, J, Pous, J, Fita, I, Verdaguer, N.
登録日2008-07-09
公開日2009-04-07
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Minor group human rhinovirus-receptor interactions: geometry of multimodular attachment and basis of recognition
Febs Lett., 583, 2009
3DTD
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BU of 3dtd by Molmil
Crystal structure of invasion associated protein b from bartonella henselae
分子名称: GLYCEROL, Invasion-associated protein B
著者Patskovsky, Y, Ozyurt, S, Freeman, J, Slocombe, A, Groshong, C, Koss, J, Smith, D, Wasserman, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2008-07-14
公開日2008-09-09
最終更新日2021-02-10
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal Structure of Invasion Associated Protein B from Bartonella Henselae.
To be Published
3HMW
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BU of 3hmw by Molmil
Crystal structure of ustekinumab FAB
分子名称: CADMIUM ION, USTEKINUMAB FAB HEAVY CHAIN, USTEKINUMAB FAB LIGHT CHAIN
著者Luo, J.
登録日2009-05-29
公開日2010-06-09
最終更新日2015-07-22
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural basis for the dual recognition of IL-12 and IL-23 by ustekinumab.
J.Mol.Biol., 402, 2010
6C1A
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BU of 6c1a by Molmil
MBD2 in complex with methylated DNA
分子名称: Methyl-CpG-binding domain protein 2, UNKNOWN ATOM OR ION, complement to dna strand 1, ...
著者Liu, K, Xu, C, Tempel, W, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2018-01-04
公開日2018-02-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural basis for the ability of MBD domains to bind methyl-CG and TG sites in DNA.
J. Biol. Chem., 293, 2018
1GOJ
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BU of 1goj by Molmil
Structure of a fast kinesin: Implications for ATPase mechanism and interactions with microtubules
分子名称: ADENOSINE-5'-DIPHOSPHATE, KINESIN HEAVY CHAIN, MAGNESIUM ION
著者Song, Y.-H, Marx, A, Muller, J, Woehlke, G, Schliwa, M, Krebs, A, Hoenger, A, Mandelkow, E.
登録日2001-10-21
公開日2001-11-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of a Fast Kinesin: Implications for ATPase Mechanism and Interactions with Microtubules
Embo J., 20, 2001
6C1T
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MBD2 in complex with a partially methylated DNA
分子名称: 12-mer DNA, GLYCEROL, Methyl-CpG-binding domain protein 2, ...
著者Lei, M, Tempel, W, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
登録日2018-01-05
公開日2018-02-14
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural basis for the ability of MBD domains to bind methyl-CG and TG sites in DNA.
J. Biol. Chem., 293, 2018
3DX8
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Crystal Structure of B*4405 presenting a 10mer EBV epitope
分子名称: Beta-2-microglobulin, EBV decapeptide epitope, GLYCEROL, ...
著者Archbold, J.K, Ely, L.K, Rossjohn, J.
登録日2008-07-23
公開日2009-01-27
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Natural micropolymorphism in human leukocyte antigens provides a basis for genetic control of antigen recognition.
J.Exp.Med., 206, 2009
2Q2G
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Crystal structure of dimerization domain of HSP40 from Cryptosporidium parvum, cgd2_1800
分子名称: Heat shock 40 kDa protein, putative (fragment), SULFATE ION
著者Wernimont, A.K, Lew, J, Lin, L, Hassanali, A, Kozieradzki, I, Wasney, G, Vedadi, M, Walker, J.R, Zhao, Y, Schapira, M, Bochkarev, A, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Hui, R, Brokx, S, Structural Genomics Consortium (SGC)
登録日2007-05-28
公開日2007-06-12
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of dimerization domain of HSP40 from Cryptosporidium parvum, cgd2_1800.
To be Published
6BWQ
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LarC2, the C-terminal domain of a cyclometallase involved in the synthesis of the NPN cofactor of lactate racemase, in complex with MnCTP
分子名称: CHLORIDE ION, CYTIDINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, ...
著者Fellner, M, Hausinger, R.P, Hu, J.
登録日2017-12-15
公開日2018-06-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Biosynthesis of the nickel-pincer nucleotide cofactor of lactate racemase requires a CTP-dependent cyclometallase.
J. Biol. Chem., 293, 2018
1TLY
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Tsx structure
分子名称: Nucleoside-specific channel-forming protein tsx
著者Ye, J, van den Berg, B.
登録日2004-06-10
公開日2004-08-24
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Crystal structure of the bacterial nucleoside transporter Tsx.
Embo J., 23, 2004
6BGF
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Crystal structure of cysteine-bound ferrous form of the crosslinked human cysteine dioxygenase
分子名称: CYSTEINE, Cysteine dioxygenase type 1, FE (II) ION, ...
著者Liu, A, Li, J, Shin, I.
登録日2017-10-28
公開日2017-12-13
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.251 Å)
主引用文献Cleavage of a carbon-fluorine bond by an engineered cysteine dioxygenase.
Nat.Chem.Biol., 14, 2018
1UYN
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Translocator domain of autotransporter NalP from Neisseria meningitidis
分子名称: NALP, PENTAETHYLENE GLYCOL MONODECYL ETHER, SULFATE ION
著者Oomen, C.J, Van Ulsen, P, Van Gelder, P, Feijen, M, Tommassen, J, Gros, P.
登録日2004-03-02
公開日2004-03-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of the Translocator Domain of a Bacterial Autotransporter
Embo J., 23, 2004

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