3DPR
Human rhinovirus 2 bound to a concatamer of the VLDL receptor module V3
Summary for 3DPR
Entry DOI | 10.2210/pdb3dpr/pdb |
Descriptor | Protein VP1, Protein VP2, Protein VP3, ... (7 entities in total) |
Functional Keywords | human rhinovirus, vldl-receptor, virus-protein complex, icosahedral virus, atp-binding, capsid protein, covalent protein-rna linkage, cytoplasmic vesicle, helicase, host-virus interaction, hydrolase, lipoprotein, membrane, myristate, nucleotide-binding, nucleotidyltransferase, phosphoprotein, protease, rna replication, rna-binding, rna-directed rna polymerase, thiol protease, transferase, virion, cholesterol metabolism, coated pit, egf-like domain, endocytosis, glycoprotein, lipid metabolism, lipid transport, receptor, steroid metabolism, transmembrane, transport, vldl, virus |
Biological source | Homo sapiens (Human) More |
Cellular location | Capsid protein VP0: Virion . Capsid protein VP4: Virion . Capsid protein VP2: Virion . Capsid protein VP3: Virion . Capsid protein VP1: Virion . Protein 2B: Host cytoplasmic vesicle membrane ; Peripheral membrane protein ; Cytoplasmic side . Protein 2C: Host cytoplasmic vesicle membrane ; Peripheral membrane protein ; Cytoplasmic side . Protein 3A: Host cytoplasmic vesicle membrane ; Peripheral membrane protein ; Cytoplasmic side . Protein 3AB: Host cytoplasmic vesicle membrane ; Peripheral membrane protein ; Cytoplasmic side . Viral protein genome-linked: Virion . Protease 3C: Host cytoplasm . Protein 3CD: Host cytoplasmic vesicle membrane ; Peripheral membrane protein ; Cytoplasmic side . RNA-directed RNA polymerase: Host cytoplasmic vesicle membrane ; Peripheral membrane protein ; Cytoplasmic side : P04936 P04936 P04936 P04936 Membrane; Single-pass type I membrane protein: P98155 |
Total number of polymer chains | 5 |
Total formula weight | 99914.08 |
Authors | Querol-Audi, J.,Pous, J.,Fita, I.,Verdaguer, N. (deposition date: 2008-07-09, release date: 2009-04-07, Last modification date: 2017-10-25) |
Primary citation | Querol-Audi, J.,Konecsni, T.,Pous, J.,Carugo, O.,Fita, I.,Verdaguer, N.,Blaas, D. Minor group human rhinovirus-receptor interactions: geometry of multimodular attachment and basis of recognition Febs Lett., 583:235-240, 2009 Cited by PubMed: 19073182DOI: 10.1016/j.febslet.2008.12.014 PDB entries with the same primary citation |
Experimental method | X-RAY DIFFRACTION (3.5 Å) |
Structure validation
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