Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 42507 件

1SJJ
DownloadVisualize
BU of 1sjj by Molmil
Cryo-EM Structure of Chicken Gizzard Smooth Muscle alpha-Actinin
分子名称: actinin
著者Liu, J, Taylor, D.W, Taylor, K.A.
登録日2004-03-03
公開日2004-03-23
最終更新日2024-02-14
実験手法ELECTRON CRYSTALLOGRAPHY (20 Å)
主引用文献A 3-D Reconstruction of Smooth Muscle alpha-Actinin by CryoEm Reveals Two Different Conformations at the Actin-binding Region.
J.Mol.Biol., 338, 2004
4PJI
DownloadVisualize
BU of 4pji by Molmil
Structure of human MR1-Ac-6-FP in complex with human MAIT C-C10 TCR
分子名称: Beta-2-microglobulin, GLYCEROL, Major histocompatibility complex class I-related gene protein, ...
著者Birkinshaw, R.W, Rossjohn, J.
登録日2014-05-12
公開日2014-07-02
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A molecular basis underpinning the T cell receptor heterogeneity of mucosal-associated invariant T cells.
J.Exp.Med., 211, 2014
2ONU
DownloadVisualize
BU of 2onu by Molmil
Plasmodium falciparum ubiquitin conjugating enzyme PF10_0330, putative homologue of human UBE2H
分子名称: TETRAETHYLENE GLYCOL, Ubiquitin-conjugating enzyme, putative
著者Dong, A, Lew, J, Lin, L, Hassanali, A, Zhao, Y, Senisterra, G, Wasney, G, Vedadi, M, Kozieradzki, I, Bochkarev, A, Arrowsmith, C.H, Edwards, A.M, Sundstrom, M, Weigelt, J, Hui, R, Brokx, S.J, Structural Genomics Consortium (SGC)
登録日2007-01-24
公開日2007-02-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Plasmodium falciparum ubiquitin conjugating enzyme PF10_0330, putative homologue of human UBE2H
To be Published
2OO2
DownloadVisualize
BU of 2oo2 by Molmil
Crystal structure of protein AF1782 from Archaeoglobus fulgidus, Pfam DUF357
分子名称: Hypothetical protein AF_1782
著者Bonanno, J.B, Rutter, M, Bain, K.T, Adams, J, Sridhar, V, Smyth, L, Freeman, J, Atwell, S, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-01-25
公開日2007-02-06
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of the hypothetical AF_1782 protein from Archaeoglobus fulgidus
To be Published
7O5I
DownloadVisualize
BU of 7o5i by Molmil
Crystal structure of apo-SwHKA (Hydroxy ketone aldolase) from Sphingomonas wittichii RW1
分子名称: BROMIDE ION, DI(HYDROXYETHYL)ETHER, HpcH/HpaI aldolase, ...
著者Laustsen, J, Justo, I, Marsden, S.R, Hanefeld, U, Bento, I.
登録日2021-04-08
公開日2022-11-16
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Substrate Induced Movement of the Metal Cofactor between Active and Resting State.
Angew.Chem.Int.Ed.Engl., 61, 2022
4E40
DownloadVisualize
BU of 4e40 by Molmil
The haptoglobin-hemoglobin receptor of Trypanosoma congolense
分子名称: Putative uncharacterized protein
著者Higgins, M.K, Tkachenko, O, Brown, A, Reed, J, Carrington, M.
登録日2012-03-11
公開日2013-01-16
最終更新日2013-02-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of the trypanosome haptoglobin-hemoglobin receptor and implications for nutrient uptake and innate immunity.
Proc.Natl.Acad.Sci.USA, 110, 2013
1G5L
DownloadVisualize
BU of 1g5l by Molmil
CO(III)-BLEOMYCIN-OOH BOUND TO AN OLIGONUCLEOTIDE CONTAINING A PHOSPHOGLYCOLATE LESION
分子名称: 2-PHOSPHOGLYCOLIC ACID, 5'-D(*CP*CP*AP*AP*AP*G)-3', 5'-D(*CP*CP*CP*AP*GP*TP*AP*CP*TP*TP*TP*GP*G)-3', ...
著者Hoehn, S.T, Junker, H.-D, Bunt, R.C, Turner, C.J, Stubbe, J.
登録日2000-11-01
公開日2001-06-06
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of Co(III)-bleomycin-OOH bound to a phosphoglycolate lesion containing oligonucleotide: implications for bleomycin-induced double-strand DNA cleavage.
Biochemistry, 40, 2001
7O5V
DownloadVisualize
BU of 7o5v by Molmil
Crystal structure of holo-H44A mutant of Hydroxy ketone aldolase (SwHKA) from Sphingomonas wittichii RW1, in complex with Hydroxypyruvate
分子名称: 3-HYDROXYPYRUVIC ACID, BROMIDE ION, HpcH/HpaI aldolase, ...
著者Laustsen, J, Justo, I, Marsden, S.R, Hanefeld, U, Bento, I.
登録日2021-04-09
公開日2022-11-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Substrate Induced Movement of the Metal Cofactor between Active and Resting State.
Angew.Chem.Int.Ed.Engl., 61, 2022
2OPG
DownloadVisualize
BU of 2opg by Molmil
The crystal structure of the 10th PDZ domain of MPDZ
分子名称: Multiple PDZ domain protein, SODIUM ION
著者Gileadi, C, Phillips, C, Elkins, J, Papagrigoriou, E, Ugochukwu, E, Gorrec, F, Savitsky, P, Umeano, C, Berridge, G, Gileadi, O, Salah, E, Edwards, A, Arrowsmith, C.H, Weigelt, J, Sundstrom, M, Doyle, D.A, Structural Genomics Consortium (SGC)
登録日2007-01-29
公開日2007-02-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The crystal structure of the 10th PDZ domain of MPDZ
To be Published
4QPO
DownloadVisualize
BU of 4qpo by Molmil
Mechanistic basis of plasmid-specific DNA binding of the F plasmid regulatory protein, TraM
分子名称: PHOSPHATE ION, Relaxosome protein TraM
著者Peng, Y, Lu, J, Wong, J, Edwards, R.A, Frost, L.S, Glover, J.N.M.
登録日2014-06-24
公開日2014-09-03
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献Mechanistic Basis of Plasmid-Specific DNA Binding of the F Plasmid Regulatory Protein, TraM.
J.Mol.Biol., 426, 2014
1G7M
DownloadVisualize
BU of 1g7m by Molmil
CRYSTAL STRUCTURE OF HEN EGG WHITE LYSOZYME (HEL) COMPLEXED WITH THE MUTANT ANTI-HEL MONOCLONAL ANTIBODY D1.3 (VLW92V)
分子名称: ANTI-HEN EGG WHITE LYSOZYME MONOCLONAL ANTIBODY D1.3, LYSOZYME C
著者Sundberg, E.J, Urrutia, M, Braden, B.C, Isern, J, Mariuzza, R.A.
登録日2000-11-10
公開日2000-11-22
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Estimation of the hydrophobic effect in an antigen-antibody protein-protein interface.
Biochemistry, 39, 2000
3ZRP
DownloadVisualize
BU of 3zrp by Molmil
Crystal structure and substrate specificity of a thermophilic archaeal serine : pyruvate aminotransferase from Sulfolobus solfataricus
分子名称: PYRIDOXAL-5'-PHOSPHATE, SERINE-PYRUVATE AMINOTRANSFERASE (AGXT)
著者Sayer, C, Bommer, M, Isupov, M.N, Ward, J, Littlechild, J.
登録日2011-06-17
公開日2012-06-27
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal Structure and Substrate Specificity of the Thermophilic Serine:Pyruvate Aminotransferase from Sulfolobus Solfataricus
Acta Crystallogr.,Sect.D, 68, 2012
4QS8
DownloadVisualize
BU of 4qs8 by Molmil
Arabidopsis Hexokinase 1 (AtHXK1) structure in ligand-free form
分子名称: Hexokinase-1
著者Feng, J, Zhao, S, Liu, L.
登録日2014-07-03
公開日2015-02-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.798 Å)
主引用文献Biochemical and structural study of Arabidopsis hexokinase 1
Acta Crystallogr.,Sect.D, 71, 2015
7ON1
DownloadVisualize
BU of 7on1 by Molmil
Cenp-A nucleosome in complex with Cenp-C
分子名称: BJ4_G0006610.mRNA.1.CDS.1, BJ4_G0007000.mRNA.1.CDS.1, DNA (123-MER), ...
著者Yan, K, Yang, J, Zhang, Z, Barford, D.
登録日2021-05-25
公開日2021-07-07
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Cenp-A nucleosome in complex with Cenp-C
To Be Published
3S3R
DownloadVisualize
BU of 3s3r by Molmil
Structure of cathepsin B1 from Schistosoma mansoni in complex with K11777 inhibitor
分子名称: Cathepsin B-like peptidase (C01 family), Nalpha-[(4-methylpiperazin-1-yl)carbonyl]-N-[(3S)-1-phenyl-5-(phenylsulfonyl)pentan-3-yl]-L-phenylalaninamide
著者Rezacova, P, Jilkova, A, Brynda, J, Horn, M, Mares, M.
登録日2011-05-18
公開日2011-08-10
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Structural Basis for Inhibition of Cathepsin B Drug Target from the Human Blood Fluke, Schistosoma mansoni.
J.Biol.Chem., 286, 2011
4EJR
DownloadVisualize
BU of 4ejr by Molmil
Crystal structure of major capsid protein S domain from rabbit hemorrhagic disease virus
分子名称: Major capsid protein VP60
著者Xu, F, Ma, J, Zhang, K, Wang, X, Sun, F.
登録日2012-04-07
公開日2013-01-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Atomic model of rabbit hemorrhagic disease virus by cryo-electron microscopy and crystallography.
Plos Pathog., 9, 2013
7P35
DownloadVisualize
BU of 7p35 by Molmil
Structure of the SARS-CoV-2 3CL protease in complex with rupintrivir
分子名称: 3C-like proteinase, 4-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE-3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER
著者Fabrega-Ferrer, M, Perez-Saavedra, J, Herrera-Morande, A, Coll, M.
登録日2021-07-07
公開日2021-07-21
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.256 Å)
主引用文献Structure and inhibition of SARS-CoV-1 and SARS-CoV-2 main proteases by oral antiviral compound AG7404.
Antiviral Res., 208, 2022
7OJH
DownloadVisualize
BU of 7ojh by Molmil
ABCG2 topotecan turnover-1 state
分子名称: (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE, ADENOSINE-5'-TRIPHOSPHATE, Broad substrate specificity ATP-binding cassette transporter ABCG2, ...
著者Yu, Q, Ni, D, Kowal, J, Manolaridis, I, Jackson, S.M, Stahlberg, H, Locher, K.P.
登録日2021-05-15
公開日2021-07-21
最終更新日2021-07-28
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structures of ABCG2 under turnover conditions reveal a key step in the drug transport mechanism.
Nat Commun, 12, 2021
1FYS
DownloadVisualize
BU of 1fys by Molmil
Ribonuclease T1 V16C mutant
分子名称: CALCIUM ION, GUANOSINE-2'-MONOPHOSPHATE, GUANYL-SPECIFIC RIBONUCLEASE T1
著者De Vos, S, Loris, R, Steyaert, J.
登録日2000-10-03
公開日2000-10-25
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Hydrophobic core manipulations in ribonuclease T1.
Biochemistry, 40, 2001
6BBE
DownloadVisualize
BU of 6bbe by Molmil
Structure of N-glycosylated porcine surfactant protein-D
分子名称: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者van Eijk, M, Rynkiewicz, M.J, Khatri, K, Leymarie, N, Zaia, J, White, M.R, Hartshorn, K.L, Cafarella, T.R, van Die, I, Hessing, M, Seaton, B.A, Haagsman, H.P.
登録日2017-10-18
公開日2018-05-23
最終更新日2021-03-24
実験手法X-RAY DIFFRACTION (1.898 Å)
主引用文献Lectin-mediated binding and sialoglycans of porcine surfactant protein D synergistically neutralize influenza A virus.
J. Biol. Chem., 293, 2018
7OSZ
DownloadVisualize
BU of 7osz by Molmil
Human Prolyl-tRNA Synthetase in Complex with L-proline and Compound 4d
分子名称: 3-[(2-methylphenyl)methylamino]pyrazine-2-carboxamide, Bifunctional glutamate/proline--tRNA ligase, PROLINE, ...
著者Pang, L, Zitko, J, Strelkov, S.V, Weeks, S.D.
登録日2021-06-09
公開日2021-07-28
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Towards Novel 3-Aminopyrazinamide-Based Prolyl-tRNA Synthetase Inhibitors: In Silico Modelling, Thermal Shift Assay and Structural Studies.
Int J Mol Sci, 22, 2021
7NSZ
DownloadVisualize
BU of 7nsz by Molmil
Drosophila PGRP-LB Y78F mutant
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Isoform A of Peptidoglycan-recognition protein LB, SODIUM ION, ...
著者Orlans, J, Aller, P, Da Silva, P.
登録日2021-03-08
公開日2021-05-19
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献PGRP-LB: An Inside View into the Mechanism of the Amidase Reaction.
Int J Mol Sci, 22, 2021
1SEV
DownloadVisualize
BU of 1sev by Molmil
Mature and translocatable forms of glyoxysomal malate dehydrogenase have different activities and stabilities but similar crystal structures
分子名称: Malate dehydrogenase, glyoxysomal precursor
著者Cox, B.R, Chit, M.M, Weaver, T.M, Bailey, J, Gietl, C, Bell, E, Banaszak, L.J.
登録日2004-02-18
公開日2005-01-25
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Organelle and translocatable forms of glyoxysomal malate dehydrogenase. The effect of the N-terminal presequence
Febs J., 272, 2005
3SCM
DownloadVisualize
BU of 3scm by Molmil
Crystal structure of autoreactive-Valpha14-Vbeta6 NKT TCR in complex with CD1d-isoglobotrihexosylceramide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ...
著者Clarke, A.J, Rossjohn, J.
登録日2011-06-08
公開日2011-10-05
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Recognition of beta-linked self glycolipids mediated by natural killer T cell antigen receptors
Nat.Immunol., 12, 2011
7NSX
DownloadVisualize
BU of 7nsx by Molmil
Drosophila PGRP-LB wild-type
分子名称: Isoform A of Peptidoglycan-recognition protein LB, ZINC ION
著者Orlans, J, Aller, P, Da Silva, P.
登録日2021-03-08
公開日2021-05-19
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献PGRP-LB: An Inside View into the Mechanism of the Amidase Reaction.
Int J Mol Sci, 22, 2021

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon