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PDB: 42254 件

6GM3
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[FeFe]-hydrogenase CpI from Clostridium pasteurianum, variant R286A
分子名称: FE2/S2 (INORGANIC) CLUSTER, IRON/SULFUR CLUSTER, Iron hydrogenase 1, ...
著者Duan, J, Esselborn, J, Hofmann, E, Winkler, M, Happe, T.
登録日2018-05-24
公開日2018-11-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Crystallographic and spectroscopic assignment of the proton transfer pathway in [FeFe]-hydrogenases.
Nat Commun, 9, 2018
3DSF
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Crystal structure of anti-osteopontin antibody 23C3 in complex with W43A mutated epitope peptide
分子名称: Fab fragment of anti-osteopontin antibody 23C3, Heavy chain, Light chain, ...
著者Du, J, Zhong, C, Yang, H, Ding, J.
登録日2008-07-12
公開日2008-10-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Molecular basis of recognition of human osteopontin by 23C3, a potential therapeutic antibody for treatment of rheumatoid arthritis
J.Mol.Biol., 382, 2008
7KJ2
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SARS-CoV-2 Spike Glycoprotein with one ACE2 Bound
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
著者Zhang, J, Xiao, T.S, Cai, Y.F, Chen, B.
登録日2020-10-25
公開日2020-11-11
最終更新日2021-02-24
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献A trimeric human angiotensin-converting enzyme 2 as an anti-SARS-CoV-2 agent.
Nat.Struct.Mol.Biol., 28, 2021
1QV1
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Atomic resolution structure of obelin from Obelia longissima
分子名称: C2-HYDROPEROXY-COELENTERAZINE, CALCIUM ION, COBALT (II) ION, ...
著者Liu, Z.J, Vysotski, E.S, Deng, L, Lee, J, Rose, J, Wang, B.C.
登録日2003-08-26
公開日2003-11-11
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Atomic resolution structure of obelin: soaking with calcium enhances electron density of the second oxygen atom substituted at the C2-position of coelenterazine.
Biochem.Biophys.Res.Commun., 311, 2003
6FWN
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Structure and dynamics of the platelet integrin-binding C4 domain of von Willebrand factor
分子名称: von Willebrand factor
著者Xu, E.-R, von Buelow, S, Chen, P.-C, Lenting, P.J, Kolsek, K, Aponte-Santamaria, C, Simon, B, Foot, J, Obser, T, Graeter, F, Schneppenheim, R, Denis, C.V, Wilmanns, M, Hennig, J.
登録日2018-03-06
公開日2018-10-24
最終更新日2019-05-08
実験手法SOLUTION NMR
主引用文献Structure and dynamics of the platelet integrin-binding C4 domain of von Willebrand factor.
Blood, 133, 2019
4B05
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Preclinical characterization of AZD3839, a novel clinical candidate BACE1 inhibitor for the treatment of Alzheimer Disease
分子名称: (1S)-1-[2-(difluoromethyl)pyridin-4-yl]-4-fluoro-1-(3-pyrimidin-5-ylphenyl)-1H-isoindol-3-amine, ACETATE ION, BETA-SECRETASE 1, ...
著者Jeppsson, F, Eketjall, S, Janson, J, Karlstrom, S, Gustavsson, S, Olsson, L.L, Radesater, A.C, Ploeger, B, Cebers, G, Kolmodin, K, Swahn, B.M, von Berg, S, Bueters, T, Falting, J.
登録日2012-06-28
公開日2012-10-17
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Discovery of AZD3839, a potent and selective BACE1 inhibitor clinical candidate for the treatment of Alzheimer disease.
J. Biol. Chem., 287, 2012
7KJ4
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SARS-CoV-2 Spike Glycoprotein with three ACE2 Bound
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
著者Zhang, J, Xiao, T.S, Cai, Y.F, Chen, B.
登録日2020-10-25
公開日2020-11-11
最終更新日2021-02-24
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献A trimeric human angiotensin-converting enzyme 2 as an anti-SARS-CoV-2 agent.
Nat.Struct.Mol.Biol., 28, 2021
1CQK
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CRYSTAL STRUCTURE OF THE CH3 DOMAIN FROM THE MAK33 ANTIBODY
分子名称: CH3 DOMAIN OF MAK33 ANTIBODY
著者Thies, M.J, Mayer, J, Augustine, J.G, Frederick, C.A, Lilie, H, Buchner, J.
登録日1999-08-06
公開日1999-09-11
最終更新日2018-08-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Folding and association of the antibody domain CH3: prolyl isomerization preceeds dimerization.
J.Mol.Biol., 293, 1999
1UWF
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1.7 A resolution structure of the receptor binding domain of the FimH adhesin from uropathogenic E. coli
分子名称: FIMH PROTEIN, GLYCEROL, butyl alpha-D-mannopyranoside
著者Bouckaert, J, Berglund, J, Genst, E.D, Cools, L, Hung, C.-S, Wuhrer, M, Zavialov, A, Langermann, S, Hultgren, S, Wyns, L, Oscarson, S, Knight, S.D, De Greve, H.
登録日2004-02-05
公開日2005-02-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Receptor Binding Studies Disclose a Novel Class of High-Affinity Inhibitors of the Escherichia Coli Fimh Adhesin.
Mol.Microbiol., 55, 2005
1D3L
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D1D2-ICAM-1 FULLY GLYCOSYLATED, VARIATION OF D1-D2 INTERDOMAIN ANGLE IN DIFFERENT CRYSTAL STRUCTURES.
分子名称: PROTEIN (INTERCELLULAR ADHESION MOLECULE-1)
著者Bella, J, Kolatkar, P.R, Rossmann, M.G.
登録日1999-09-29
公開日1999-12-01
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Structural studies of two rhinovirus serotypes complexed with fragments of their cellular receptor.
EMBO J., 18, 1999
6G5K
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Crystal structure of the binding domain of Botulinum Neurotoxin type B in complex with human synaptotagmin 1
分子名称: Botulinum neurotoxin type B, Synaptotagmin-1
著者Masuyer, G, Elliot, M, Favre-Guilmard, C, Liu, S.M, Maignel, J, Beard, M, Carre, D, Kalinichev, M, Lezmi, S, Mir, I, Nicoleau, C, Palan, S, Perier, C, Raban, E, Dong, M, Krupp, J, Stenmark, P.
登録日2018-03-29
公開日2019-01-16
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Engineered botulinum neurotoxin B with improved binding to human receptors has enhanced efficacy in preclinical models.
Sci Adv, 5, 2019
6GM5
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[FeFe]-hydrogenase HydA1 from Chlamydomonas reinhardtii,variant E141A
分子名称: CHLORIDE ION, Fe-hydrogenase, IRON/SULFUR CLUSTER, ...
著者Duan, J, Engelbrecht, V, Esselborn, J, Hofmann, E, Winkler, M, Happe, T.
登録日2018-05-24
公開日2018-11-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Crystallographic and spectroscopic assignment of the proton transfer pathway in [FeFe]-hydrogenases.
Nat Commun, 9, 2018
6GM7
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[FeFe]-hydrogenase HydA1 from Chlamydomonas reinhardtii,variant E144A
分子名称: CHLORIDE ION, Fe-hydrogenase, IRON/SULFUR CLUSTER
著者Duan, J, Engelbrecht, V, Esselborn, J, Hofmann, E, Winkler, M, Happe, T.
登録日2018-05-24
公開日2018-11-07
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Crystallographic and spectroscopic assignment of the proton transfer pathway in [FeFe]-hydrogenases.
Nat Commun, 9, 2018
2B4V
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Structural Basis for UTP Specificity of RNA Editing TUTases From Trypanosoma Brucei
分子名称: POTASSIUM ION, RNA editing complex protein MP57
著者Deng, J, Ernst, N.L, Turley, S, Stuart, K.D, Hol, W.G.
登録日2005-09-26
公開日2005-11-22
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for UTP specificity of RNA editing TUTases from Trypanosoma brucei.
Embo J., 24, 2005
2B56
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Structural Basis for UTP Specificity of RNA Editing TUTases From Trypanosoma Brucei
分子名称: MAGNESIUM ION, RNA editing complex protein MP57, URIDINE 5'-TRIPHOSPHATE, ...
著者Deng, J, Ernst, N.L, Turley, S, Stuart, K.D, Hol, W.G.
登録日2005-09-27
公開日2005-11-22
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Structural basis for UTP specificity of RNA editing TUTases from Trypanosoma brucei.
Embo J., 24, 2005
2Q01
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Crystal structure of glucuronate isomerase from Caulobacter crescentus
分子名称: POTASSIUM ION, Uronate isomerase
著者Patskovsky, Y, Bonanno, J, Sridhar, V, Sauder, J.M, Freeman, J, Powell, A, Koss, J, Groshong, C, Gheyi, T, Wasserman, S.R, Raushel, F, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
登録日2007-05-18
公開日2007-05-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Crystal Structure of Glucuronate Isomerase from Caulobacter crescentus.
To be Published
3FAP
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BU of 3fap by Molmil
ATOMIC STRUCTURES OF THE RAPAMYCIN ANALOGS IN COMPLEX WITH BOTH HUMAN FKBP12 AND FRB DOMAIN OF FRAP
分子名称: C15-(R)-METHYLTHIENYL RAPAMYCIN, FK506-BINDING PROTEIN, FKBP12-RAPAMYCIN ASSOCIATED PROTEIN
著者Liang, J, Clardy, J.
登録日1999-05-06
公開日2000-09-13
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Refined structure of the FKBP12-rapamycin-FRB ternary complex at 2.2 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
6GXV
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Amylase in complex with acarbose
分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, A-amylase, CALCIUM ION, ...
著者Agirre, J, Moroz, O, Meier, S, Brask, J, Munch, A, Hoff, T, Andersen, C, Wilson, K.S, Davies, G.J.
登録日2018-06-27
公開日2019-01-23
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献The structure of the AliC GH13 alpha-amylase from Alicyclobacillus sp. reveals the accommodation of starch branching points in the alpha-amylase family.
Acta Crystallogr D Struct Biol, 75, 2019
6GYA
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Amylase in complex with branched ligand
分子名称: A-amylase, CALCIUM ION, SODIUM ION, ...
著者Agirre, J, Moroz, O, Meier, S, Brask, J, Munch, A, Hoff, T, Andersen, C, Wilson, K.S, Davies, G.J.
登録日2018-06-28
公開日2019-01-23
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献The structure of the AliC GH13 alpha-amylase from Alicyclobacillus sp. reveals the accommodation of starch branching points in the alpha-amylase family.
Acta Crystallogr D Struct Biol, 75, 2019
4KQZ
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structure of the receptor binding domain (RBD) of MERS-CoV spike
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, S protein
著者Lu, G, Hu, Y, Wang, Q, Qi, J, Gao, F, Li, Y, Zhang, Y, Zhang, W, Yuan, Y, Bao, J, Zhang, B, Shi, Y, Yan, J, Gao, G.F.
登録日2013-05-15
公開日2013-07-10
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.514 Å)
主引用文献Molecular basis of binding between novel human coronavirus MERS-CoV and its receptor CD26.
Nature, 500, 2013
2AOC
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Crystal structure analysis of HIV-1 protease mutant I84V with a substrate analog P2-NC
分子名称: CHLORIDE ION, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Tie, Y, Boross, P.I, Wang, Y.F, Gaddis, L, Liu, F, Chen, X, Tozser, J, Harrison, R.W, Weber, I.T.
登録日2005-08-12
公開日2006-01-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Molecular basis for substrate recognition and drug resistance from 1.1 to 1.6 angstroms resolution crystal structures of HIV-1 protease mutants with substrate analogs.
Febs J., 272, 2005
2A78
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Crystal structure of the C3bot-RalA complex reveals a novel type of action of a bacterial exoenzyme
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Mono-ADP-ribosyltransferase C3, ...
著者Pautsch, A, Vogelsgesang, M, Trankle, J, Herrmann, C, Aktories, K.
登録日2005-07-05
公開日2005-10-11
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Crystal structure of the C3bot-RalA complex reveals a novel type of action of a bacterial exoenzyme.
Embo J., 24, 2005
1ZMX
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Crystal structure of D. melanogaster deoxyribonucleoside kinase N64D mutant in complex with thymidine
分子名称: Deoxynucleoside kinase, SULFATE ION, THYMIDINE
著者Welin, M, Skovgaard, T, Knecht, W, Berenstein, D, Munch-Petersen, B, Piskur, J, Eklund, H.
登録日2005-05-11
公開日2005-05-24
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural basis for the changed substrate specificity of Drosophila melanogaster deoxyribonucleoside kinase mutant N64D.
Febs J., 272, 2005
6GKL
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Translation initiation factor 4E in complex with beta-phosphorothioate trinucleotide mRNA 5' cap diastereomer 2 (m7GppSpApG D2)
分子名称: Eukaryotic translation initiation factor 4E, GLYCEROL, [[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-azanyl-4,5-dihydropurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-4-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-sulfanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-7-methyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
著者Warminski, M, Nowak, E, Kowalska, J, Jemielity, J, Nowotny, M.
登録日2018-05-21
公開日2019-06-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Translation initiation factor 4E in complex with beta-phosphorothioate trinucleotide mRNA 5' cap diastereomer 2 (m7GppSpApG D2)
To Be Published
7KJ3
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SARS-CoV-2 Spike Glycoprotein with two ACE2 Bound
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
著者Zhang, J, Xiao, T.S, Cai, Y.F, Chen, B.
登録日2020-10-25
公開日2020-11-11
最終更新日2021-02-24
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献A trimeric human angiotensin-converting enzyme 2 as an anti-SARS-CoV-2 agent.
Nat.Struct.Mol.Biol., 28, 2021

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