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PDB: 42550 件

3V19
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Forestalling insulin fibrillation by insertion of a chiral clamp mechanism-based application of protein engineering to global health
分子名称: CHLORIDE ION, Insulin, PHENOL, ...
著者Wan, Z.L, Hua, Q.X, Wickramasinghe, N.P, Huang, K, Petkova, A.T, Hu, S.Q, Phillips, N.B, Yeh, I.J, Whittake, J, Ismail-Beigi, F, Katsoyyannis, P.G, Tycko, R, Weiss, M.A.
登録日2011-12-09
公開日2012-12-12
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Forestalling insulin fibrillation by insertion of a chiral clamp mechanism-based application of protein engineering to global health
To be Published
1UKG
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Pterocarps angolensis lectin PAL in complex with methyl-alpha-mannose
分子名称: CALCIUM ION, MANGANESE (II) ION, lectin, ...
著者Loris, R, Van Walle, I, De Greve, H, Beeckmans, S, Deboeck, F, Wyns, L, Bouckaert, J.
登録日2003-08-21
公開日2004-02-10
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural Basis of Oligomannose Recognition by the Pterocarpus angolensis Seed Lectin
J.Mol.Biol., 335, 2004
3V2N
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COMPcc in complex with fatty acids
分子名称: Cartilage Oligomerization matrix protein (coiled-coil domain), MYRISTIC ACID
著者Stetefeld, J.
登録日2011-12-12
公開日2013-01-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The pentameric channel of COMPcc in complex with different fatty acids.
Plos One, 7, 2012
3V32
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Crystal structure of MCPIP1 N-terminal conserved domain
分子名称: Ribonuclease ZC3H12A
著者Xu, J, Peng, W, Sun, Y, Wang, X, Xu, Y, Li, X, Gao, G, Rao, Z.
登録日2011-12-12
公開日2012-05-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural study of MCPIP1 N-terminal conserved domain reveals a PIN-like RNase
Nucleic Acids Res., 40, 2012
3IWW
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Crystal structure of human glutamate carboxypeptidase II (GCPII) in a complex with DBIBzL, a urea-based inhibitor
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Barinka, C, Lubkowski, J.
登録日2009-09-03
公開日2009-11-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Bioisosterism of urea-based GCPII inhibitors: Synthesis and structure-activity relationship studies.
Bioorg.Med.Chem.Lett., 20, 2010
3IXJ
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Crystal structure of beta-secretase 1 in complex with selective beta-secretase 1 inhibitor
分子名称: Beta-secretase 1, N-[4-(1-BENZYLCARBAMOYL-2-METHYL-PROPYLCARBAMOYL)-1-(3,5-DIFLUORO-PHENOXYMETHYL)-2-HYDROXY-4-METHOXY-BUTYL]-5-(METHANESULFONYL-METHYL-AMINO)-N'-(1-PHENYLETHYL)-ISOPHTHALAMIDE, SULFATE ION
著者Borkakoti, N, Lindberg, J, Nystrom, S.
登録日2009-09-04
公開日2010-03-02
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Design and Synthesis of Potent and Selective BACE-1 Inhibitors.
J.Med.Chem., 53, 2010
3UUO
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The discovery of potent, selectivity, and orally bioavailable pyrozoloquinolines as PDE10 inhibitors for the treatment of Schizophrenia
分子名称: 6-methoxy-3,8-dimethyl-4-(piperazin-1-yl)-1H-pyrazolo[3,4-b]quinoline, MAGNESIUM ION, PHOSPHATE ION, ...
著者Ho, G.D, Yang, S, Smotryski, J, Bercovici, A, Nechuta, T, Smith, E.M, McElroy, W, Tan, Z, Tulshian, D, Mckittrick, B, Greenlee, W.J, Hruza, A, Xiao, L, Rindgen, D, Guzzi, M, Zhang, X, Bleickardt, C, Mullins, D, Hodgson, R.
登録日2011-11-28
公開日2012-01-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献The discovery of potent, selective, and orally active pyrazoloquinolines as PDE10A inhibitors for the treatment of Schizophrenia.
Bioorg.Med.Chem.Lett., 22, 2012
3V71
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Crystal structure of PUF-6 in complex with 5BE13 RNA
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Puf (Pumilio/fbf) domain-containing protein 7, confirmed by transcript evidence, ...
著者Qiu, C, Kershner, A, Wang, Y, Holley, C.H, Wilinski, D, Keles, S, Kimble, J, Wickens, M, Hall, T.M.T.
登録日2011-12-20
公開日2012-01-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.902 Å)
主引用文献Divergence of PUF protein specificity through variations in an RNA-binding pocket
J.Biol.Chem., 2012
3UW6
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Crystal Structure of Engineered Protein, Northeast Structural Genomics Consortium Target OR120
分子名称: Alanine racemase
著者Seetharaman, J, Lew, S, Nivon, L, Baker, D, Bjelic, S, Ciccosanti, C, Sahdev, S, Xiao, R, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
登録日2011-11-30
公開日2012-02-08
最終更新日2022-03-02
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Computational design of enone-binding proteins with catalytic activity for the Morita-Baylis-Hillman reaction.
Acs Chem.Biol., 8, 2013
3IYY
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Coordinates of the b1b bridge-forming protein structures fitted into the Cryo-EM map of EFG.GDPNP-bound E.coli 70S ribosome(EMD-1363)
分子名称: 30S ribosomal protein S13, 50S ribosomal protein L31, 50S ribosomal protein L5
著者Shasmal, M, Chakraborty, B, Sengupta, J.
登録日2010-07-23
公開日2010-09-01
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (10.9 Å)
主引用文献Intrinsic molecular properties of the protein-protein bridge facilitate ratchet-like motion of the ribosome.
Biochem.Biophys.Res.Commun., 399, 2010
3IZG
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Bacteriophage T7 prohead shell EM-derived atomic model
分子名称: Major capsid protein 10A
著者Ionel, A, Velazquez-Muriel, J.A, Agirrezabala, X, Luque, D, Cuervo, A, Caston, J.R, Valpuesta, J.M, Martin-Benito, J, Carrascosa, J.L.
登録日2010-10-27
公開日2010-11-17
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (10.9 Å)
主引用文献Molecular rearrangements involved in the capsid shell maturation of bacteriophage T7.
J.Biol.Chem., 286, 2011
3IZX
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3.1 Angstrom cryoEM structure of cytoplasmic polyhedrosis virus
分子名称: Capsid protein VP1, Structural protein VP3, Viral structural protein 5
著者Yu, X, Ge, P, Jiang, J, Atanasov, I, Zhou, Z.H.
登録日2011-01-15
公開日2011-06-22
最終更新日2018-08-22
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Atomic Model of CPV Reveals the Mechanism Used by This Single-Shelled Virus to Economically Carry Out Functions Conserved in Multishelled Reoviruses.
Structure, 19, 2011
3UXO
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BU of 3uxo by Molmil
Crystal Structure of Rat DNA Polymerase Beta Mutator I260Q Apoenzyme
分子名称: DNA polymerase beta
著者Gridley, C.L, Jaeger, J.
登録日2011-12-05
公開日2012-12-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Changes in the Hydrophobic Hinge Region Adversely Affect the Activity and Fidelity of the I260Q Mutator DNA Polymerase beta.
Biochemistry, 52, 2013
3IZP
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Conformation of EF-G during translocation
分子名称: Elongation factor G
著者Li, W, Trabuco, L.G, Schulten, K, Frank, J.
登録日2010-11-15
公開日2011-03-16
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY
主引用文献Molecular dynamics of EF-G during translocation.
Proteins, 79, 2011
3V2Q
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COMPcc in complex with fatty acids
分子名称: Cartilage Oligomerization matrix protein (coiled-coil domain), PALMITIC ACID
著者Stetefeld, J.
登録日2011-12-12
公開日2013-01-16
最終更新日2013-03-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The pentameric channel of COMPcc in complex with different fatty acids.
Plos One, 7, 2012
1NRX
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BU of 1nrx by Molmil
Crystal structure of 3-dehydroquinate synthase (DHQS) in complex with ZN2+ and NAD
分子名称: 3-dehydroquinate synthase, CHLORIDE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Nichols, C.E, Ren, J, Lamb, H.K, Hawkins, A.R, Stammers, D.K.
登録日2003-01-26
公開日2003-03-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Ligand-induced Conformational Changes and a Mechanism for Domain Closure in Aspergillus nidulans Dehydroquinate Synthase
J.MOL.BIOL., 327, 2003
3UPD
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BU of 3upd by Molmil
2.9 Angstrom Crystal Structure of Ornithine Carbamoyltransferase (ArgF) from Vibrio vulnificus
分子名称: Ornithine carbamoyltransferase
著者Minasov, G, Halavaty, A, Shuvalova, L, Winsor, J, Dubrovska, I, Papazisi, L, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2011-11-17
公開日2011-12-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献2.9 Angstrom Crystal Structure of Ornithine Carbamoyltransferase (ArgF) from Vibrio vulnificus.
TO BE PUBLISHED
3KFK
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Crystal structures of a group II chaperonin from Methanococcus maripaludis
分子名称: Chaperonin, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
著者Pereira, J.H, Ralston, C.Y, Douglas, N, Meyer, D, Knee, K.M, Goulet, D.R, King, J.A, Frydman, J, Adams, P.D.
登録日2009-10-27
公開日2010-06-23
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (6.003 Å)
主引用文献Crystal structures of a group II chaperonin reveal the open and closed states associated with the protein folding cycle.
J.Biol.Chem., 285, 2010
1NUA
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Crystal structure of 3-dehydroquinate synthase (DHQS) in complex with ZN2+
分子名称: 3-DEHYDROQUINATE SYNTHASE, CHLORIDE ION, ZINC ION
著者Nichols, C.E, Ren, J, Lamb, H.K, Hawkins, A.R, Stammers, D.K.
登録日2003-01-31
公開日2003-03-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Ligand-induced Conformational Changes and a Mechanism for Domain Closure in Aspergillus nidulans Dehydroquinate Synthase
J.MOL.BIOL., 327, 2003
4AA7
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E.coli GlmU in complex with an antibacterial inhibitor
分子名称: BIFUNCTIONAL PROTEIN GLMU, N-(2,4-dimethoxy-5-{[(2R)-2-methyl-2,3-dihydro-1H-indol-1-yl]sulfonyl}phenyl)acetamide, SULFATE ION
著者Otterbein, L, Breed, J, Ogg, D.J.
登録日2011-11-30
公開日2012-08-15
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Inhibitors of Acetyltransferase Domain of N-Acetylglucosamine-1-Phosphate-Uridyltransferase/ Glucosamine-1-Phosphate-Acetyltransferase (Glmu). Part 1: Hit to Lead Evaluation of a Novel Arylsulfonamide Series.
Bioorg.Med.Chem.Lett., 22, 2012
4AAW
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S.pneumoniae GlmU in complex with an antibacterial inhibitor
分子名称: 4-{[1-(2-{[({5-[(3-carboxypropanoyl)amino]-2,4-dimethoxyphenyl}sulfonyl)amino]methyl}phenyl)piperidin-4-yl]methoxy}-4-oxobutanoic acid, BIFUNCTIONAL PROTEIN GLMU, SULFATE ION
著者Otterbein, L, Breed, J, Ogg, D.J.
登録日2011-12-05
公開日2012-02-15
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Inhibitors of Acetyltransferase Domain of N-Acetylglucosamine-1-Phosphate-Uridyltransferase/ Glucosamine-1-Phosphate-Acetyltransferase (Glmu). Part 1: Hit to Lead Evaluation of a Novel Arylsulfonamide Series.
Bioorg.Med.Chem.Lett., 22, 2012
4AEN
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HLA-DR1 with covalently linked CLIP106-120 in reversed orientation
分子名称: GLYCEROL, HLA CLASS II HISTOCOMPATIBILITY ANTIGEN GAMMA CHAIN, HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, ...
著者Schlundt, A, Guenther, S, Sticht, J, Wieczorek, M, Roske, Y, Heinemann, U, Freund, C.
登録日2012-01-11
公開日2012-08-01
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Peptide Linkage to the Alpha-Subunit of Mhcii Creates a Stably Inverted Antigen Presentation Complex.
J.Mol.Biol., 423, 2012
4NHB
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Crystal structure of a TRAP periplasmic solute binding protein from Desulfovibrio desulfuricans (Ddes_1525), Target EFI-510107, with bound sn-glycerol-3-phosphate
分子名称: IODIDE ION, SN-GLYCEROL-3-PHOSPHATE, TRAP dicarboxylate transporter-DctP subunit
著者Vetting, M.W, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Stead, M, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2013-11-04
公開日2013-11-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.902 Å)
主引用文献Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Biochemistry, 54, 2015
1V0K
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Xylanase Xyn10A from Streptomyces lividans in complex with xylobio-deoxynojirimycin at pH 5.8
分子名称: ENDO-1,4-BETA-XYLANASE A, PIPERIDINE-3,4,5-TRIOL, beta-D-xylopyranose
著者Gloster, T.M, Williams, S.J, Roberts, S, Tarling, C.A, Wicki S, J, Withers, G, Davies, G.J.
登録日2004-03-31
公開日2004-08-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.03 Å)
主引用文献Atomic Resolution Analyses of the Binding of Xylobiose-Derived Deoxynojirimycin and Isofagomine to Xylanase Xyn10A
Chem.Commun.(Camb.), 16, 2004
1NVA
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Crystal structure of 3-dehydroquinate synthase (DHQS) in complex with ZN2+ and ADP
分子名称: 3-DEHYDROQUINATE SYNTHASE, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ...
著者Nichols, C.E, Ren, J, Lamb, H.K, Hawkins, A.R, Stammers, D.K.
登録日2003-02-03
公開日2003-03-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Ligand-induced Conformational Changes and a Mechanism for Domain Closure in Aspergillus nidulans Dehydroquinate Synthase
J.MOL.BIOL., 327, 2003

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