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PDB: 42507 results

2ZOL
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BU of 2zol by Molmil
Crystal structure of H-2Db in complex with the W513S variant of JHMV epitope S510
Descriptor: 9-meric peptide from Spike glycoprotein, Beta-2-microglobulin, H-2 class I histocompatibility antigen, ...
Authors:Theodossis, A, Dunstone, M.A, Rossjohn, J.
Deposit date:2008-05-22
Release date:2008-06-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and biological basis of CTL escape in coronavirus-infected mice.
J Immunol., 180, 2008
5IKY
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BU of 5iky by Molmil
Apo structure of Obc1, a bifunctional enzyme for quorum sensing-dependent oxalogenesis
Descriptor: MAGNESIUM ION, Oxalate biosynthetic component 1
Authors:Oh, J, Rhee, S.
Deposit date:2016-03-04
Release date:2016-06-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Insights into an Oxalate-producing Serine Hydrolase with an Unusual Oxyanion Hole and Additional Lyase Activity
J.Biol.Chem., 291, 2016
5B4W
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BU of 5b4w by Molmil
Crystal structure of Plexin inhibitor complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Plexin-B1, Synthesized cyclic peptide
Authors:Matsunaga, Y, Kitago, Y, Arimori, T, Takagi, J.
Deposit date:2016-04-19
Release date:2016-12-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Allosteric Inhibition of a Semaphorin 4D Receptor Plexin B1 by a High-Affinity Macrocyclic Peptide
Cell Chem Biol, 23, 2016
8GZD
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BU of 8gzd by Molmil
CRYSTAL STRUCTURE OF A NOVEL ALPHA/BETA HYDROLASE FROM THERMOMONOSPORA CURVATA IN APO FORM
Descriptor: Triacylglycerol lipase
Authors:Han, X, Gao, J, Bornscheuer, U.T, Wei, R, Liu, W.
Deposit date:2022-09-26
Release date:2023-12-27
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:CRYSTAL STRUCTURE OF A NOVEL ALPHA/BETA HYDROLASE FROM THERMOMONOSPORA CURVATA IN APO FORM
To Be Published
2ZQV
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BU of 2zqv by Molmil
Crystal structure of a mutant PIN1 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Descriptor: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, SULFATE ION
Authors:Jobichen, C, Liou, Y.C, Sivaraman, J.
Deposit date:2008-08-20
Release date:2009-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.498 Å)
Cite:Structural studies on PIN1 mutants
To be Published
2ZQU
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BU of 2zqu by Molmil
Crystal structure of a mutant PIN1 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Descriptor: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, SULFATE ION
Authors:Jobichen, C, Liou, Y.C, Sivaraman, J.
Deposit date:2008-08-19
Release date:2009-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural studies on PIN1 mutants
To be Published
7Z48
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BU of 7z48 by Molmil
Bottom part (C5) of bacteriophage SU10 capsid
Descriptor: Major head protein
Authors:Siborova, M, Fuzik, T, Prochazkova, M, Novacek, J, Plevka, P.
Deposit date:2022-03-03
Release date:2022-08-10
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Tail proteins of phage SU10 reorganize into the nozzle for genome delivery.
Nat Commun, 13, 2022
5IOM
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BU of 5iom by Molmil
Crystal Structure of Nucleoside Diphosphate Kinase from Schistosoma mansoni is space group P6322
Descriptor: Nucleoside diphosphate kinase
Authors:Torini, J.R.S, Romanello, L, Bird, L.E, Nettleship, J.E, Owens, R.J, Aller, P, DeMarco, R, Brandao-Neto, J, Pereira, H.M.
Deposit date:2016-03-08
Release date:2017-08-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Characterization of a Schistosoma mansoni NDPK expressed in sexual and digestive organs.
Mol.Biochem.Parasitol., 2019
5BMF
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BU of 5bmf by Molmil
Crystal Structure of a Theophylline binding antibody Fab fragment
Descriptor: 2-(5-{1-[1-(1,3-dimethyl-2,6-dioxo-2,3,6,7-tetrahydro-1H-purin-8-yl)-4,15-dioxo-8,11-dioxa-5,14-diazaicosan-20-yl]-3,3-dimethyl-6-sulfo-1,3-dihydro-2H-indol-2-ylidene}penta-1,3-dien-1-yl)-1-ethyl-3,3-dimethyl-3H-indolium-5-sulfonate, Fab fragment heavy chain, Fab fragment light chain
Authors:Bujotzek, A, Fuchs, A, Changtao, Q, Klostermann, S, Benz, J, Antes, I, Dengl, S, Hoffmann, E, Georges, G.
Deposit date:2015-05-22
Release date:2015-07-29
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:MoFvAb: Modeling the Fv region of antibodies.
Mabs, 7, 2015
5B60
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BU of 5b60 by Molmil
Crystal structure of PtLCIB4 S47R mutant, a homolog of the limiting CO2-inducible protein LCIB
Descriptor: CHLORIDE ION, PtLCIB4 S47R mutant, ZINC ION
Authors:Jin, S, Sun, J, Wunder, T, Tang, D, Mueller-Caja, O.M, Gao, Y.
Deposit date:2016-05-24
Release date:2016-12-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into the LCIB protein family reveals a new group of beta-carbonic anhydrases
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5BNG
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BU of 5bng by Molmil
monomer of TALE type homeobox transcription factor MEIS1 complexes with specific DNA
Descriptor: DNA (5'-D(P*AP*AP*TP*TP*AP*GP*CP*TP*GP*TP*CP*A)-3'), DNA (5'-D(P*TP*GP*AP*CP*AP*GP*CP*TP*AP*A)-3'), DNA (5'-D(P*TP*GP*AP*CP*AP*GP*CP*TP*AP*A-3'), ...
Authors:Morgunova, E, Jolma, A, Yin, Y, Nitta, K, Dave, K, Popov, A, Taipale, M, Enge, M, Kivioja, T, Taipale, J.
Deposit date:2015-05-26
Release date:2015-11-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:DNA-dependent formation of transcription factor pairs alters their binding specificity.
Nature, 527, 2015
7Z44
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BU of 7z44 by Molmil
Portal of bacteriophage SU10
Descriptor: Portal protein
Authors:Siborova, M, Fuzik, T, Prochazkova, M, Novacek, J, Plevka, P.
Deposit date:2022-03-03
Release date:2022-08-10
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Tail proteins of phage SU10 reorganize into the nozzle for genome delivery.
Nat Commun, 13, 2022
5I7D
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BU of 5i7d by Molmil
Crystal Structure of srGAP2 F-BARx WT Form-2
Descriptor: SLIT-ROBO Rho GTPase-activating protein 2
Authors:Sporny, M, Guez-Haddad, J, Isupov, M.N, Opatowsky, Y.
Deposit date:2016-02-17
Release date:2017-08-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.95 Å)
Cite:Structural Basis for srGAP2 Membrane Interactions, and Antagonism by the Human Specific Paralog srGAP2C
To Be Published
1SML
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BU of 1sml by Molmil
METALLO BETA LACTAMASE L1 FROM STENOTROPHOMONAS MALTOPHILIA
Descriptor: PROTEIN (PENICILLINASE), ZINC ION
Authors:Ullah, J.H, Walsh, T.R, Taylor, I.A, Emery, D.C, Verma, C.S, Gamblin, S.J, Spencer, J.
Deposit date:1998-09-22
Release date:1999-09-20
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The crystal structure of the L1 metallo-beta-lactamase from Stenotrophomonas maltophilia at 1.7 A resolution.
J.Mol.Biol., 284, 1998
5BOC
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BU of 5boc by Molmil
Crystal structure of topoisomerase ParE inhibitor
Descriptor: 3-methyl-4-({3-[3-methyl-5-(trifluoromethyl)phenyl]-1H-pyrazol-5-yl}carbamoyl)benzoic acid, DNA topoisomerase 4 subunit B
Authors:Tan, Y.W, Chen, G.Y, Hung, A.W, Hill, J.
Deposit date:2015-05-27
Release date:2015-06-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Application of Fragment-based Drug Discovery against DNA GyraseB
To be published
8HY5
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BU of 8hy5 by Molmil
Structure of D-amino acid oxidase mutant R38H
Descriptor: 1,2-ETHANEDIOL, BENZOIC ACID, D-amino-acid oxidase, ...
Authors:Khan, S, Upadhyay, S, Dave, U, Kumar, A, Gomes, J.
Deposit date:2023-01-05
Release date:2023-01-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and mechanistic insights into ALS patient derived mutations in D-amino acid oxidase.
Int.J.Biol.Macromol., 256, 2023
5BOD
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BU of 5bod by Molmil
Crystal structure of Streptococcus pneumonia ParE inhibitor
Descriptor: (2R)-N-[3-(3,5-dimethylphenyl)-1H-pyrazol-5-yl]-1,4-dioxane-2-carboxamide, DNA topoisomerase 4 subunit B
Authors:Tan, Y.W, Chen, G, Hung, A.W, Hill, J.
Deposit date:2015-05-27
Release date:2015-06-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Application of Fragment-based Drug Discovery against DNA GyraseB
to be published
8I6L
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BU of 8i6l by Molmil
Crystal structure of horse spleen L-ferritin at -180deg Celsius.
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
Authors:Maity, B, Tian, J, Abe, S, Ueno, T.
Deposit date:2023-01-28
Release date:2023-03-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Atomic-level insights into a unique semi-clathrate hydrate formed in a confined environment of porous protein crystal.
Cryst.Growth Des., 2023
5IQ2
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BU of 5iq2 by Molmil
Crystal structure of Esterase mutant - L255W
Descriptor: Esterase
Authors:Seok, S.-H, Seo, M.-D, Kim, J, Ryu, Y.
Deposit date:2016-03-10
Release date:2017-03-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal structure of Esterase mutant - F72G
To Be Published
8I81
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BU of 8i81 by Molmil
Crystal structure of horse spleen L-ferritin A115G mutant at -180deg Celsius.
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
Authors:Maity, B, Tian, J, Abe, S, Ueno, T.
Deposit date:2023-02-02
Release date:2023-03-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Atomic-level insights into a unique semi-clathrate hydrate formed in a confined environment of porous protein crystal.
Cryst.Growth Des., 2023
8I77
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BU of 8i77 by Molmil
Crystal structure of horse spleen L-ferritin A115V mutant at -180deg Celsius.
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
Authors:Maity, B, Tian, J, Abe, S, Ueno, T.
Deposit date:2023-01-31
Release date:2023-03-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Atomic-level insights into a unique semi-clathrate hydrate formed in a confined environment of porous protein crystal.
Cryst.Growth Des., 2023
2ZEJ
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BU of 2zej by Molmil
Structure of the ROC domain from the Parkinson's disease-associated leucine-rich repeat kinase 2 reveals a dimeric GTPase
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Leucine-rich repeat kinase 2, MAGNESIUM ION
Authors:Deng, J.
Deposit date:2007-12-13
Release date:2008-01-22
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the ROC domain from the Parkinson's disease-associated leucine-rich repeat kinase 2 reveals a dimeric GTPase
Proc.Natl.Acad.Sci.Usa, 105, 2008
1IYV
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BU of 1iyv by Molmil
LIPOYL DOMAIN OF PYRUVATE DEHYDROGENASE COMPLEX, NMR, 29 STRUCTURES
Descriptor: DIHYDROLIPOAMIDE ACETYLTRANSFERASE COMPONENT OF PYRUVATE DEHYDROGENASE COMPLEX
Authors:Berg, A, Vervoort, J, De Kok, A.
Deposit date:1996-09-25
Release date:1997-03-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Three-dimensional structure in solution of the N-terminal lipoyl domain of the pyruvate dehydrogenase complex from Azotobacter vinelandii.
Eur.J.Biochem., 244, 1997
8I8Q
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BU of 8i8q by Molmil
Crystal structure of horse spleen L-ferritin H114A mutant at -180deg Celsius.
Descriptor: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
Authors:Maity, B, Tian, J, Abe, S, Ueno, T.
Deposit date:2023-02-05
Release date:2023-03-01
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Atomic-level insights into a unique semi-clathrate hydrate formed in a confined environment of porous protein crystal.
Cryst.Growth Des., 2023
4CT8
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BU of 4ct8 by Molmil
Competence or damage-inducible protein CinA from Thermus thermophilus
Descriptor: CINA-LIKE PROTEIN, GLYCEROL, SODIUM ION, ...
Authors:Derrick, J, Karuppiah, V.
Deposit date:2014-03-12
Release date:2014-10-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structure and Mechanism of the Bifunctional Cina Enzyme from Thermus Thermophilus
J.Biol.Chem., 289, 2014

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