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PDB: 356 results

5BVZ
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BU of 5bvz by Molmil
HK620 Tail Needle crystallized at pH 9 (Crystal form II)
Descriptor: CALCIUM ION, CHLORIDE ION, DNA stabilization protein
Authors:Bhardwaj, A, Cingolani, G.
Deposit date:2015-06-05
Release date:2015-06-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Plasticity of the Protein Plug That Traps Newly Packaged Genomes in Podoviridae Virions.
J.Biol.Chem., 291, 2016
4D10
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BU of 4d10 by Molmil
Crystal structure of the COP9 signalosome
Descriptor: COP9 SIGNALOSOME COMPLEX SUBUNIT 1, COP9 SIGNALOSOME COMPLEX SUBUNIT 2, COP9 SIGNALOSOME COMPLEX SUBUNIT 3, ...
Authors:Bunker, R.D, Lingaraju, G.M, Thoma, N.H.
Deposit date:2014-04-30
Release date:2014-07-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Crystal Structure of the Human Cop9 Signalosome
Nature, 512, 2014
4CDU
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BU of 4cdu by Molmil
Crystal structure of human Enterovirus 71 in complex with the uncoating inhibitor GPP3
Descriptor: 1-[(3S)-5-[4-[(E)-ETHOXYIMINOMETHYL]PHENOXY]-3-METHYL-PENTYL]-3-PYRIDIN-4-YL-IMIDAZOLIDIN-2-ONE, CHLORIDE ION, SODIUM ION, ...
Authors:De Colibus, L, Wang, X, Spyrou, J.A.B, Kelly, J, Ren, J, Grimes, J, Puerstinger, G, Stonehouse, N, Walter, T.S, Hu, Z, Wang, J, Li, X, Peng, W, Rowlands, D, Fry, E.E, Rao, Z, Stuart, D.I.
Deposit date:2013-11-06
Release date:2014-02-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:More-Powerful Virus Inhibitors from Structure-Based Analysis of Hev71 Capsid-Binding Molecules
Nat.Struct.Mol.Biol., 21, 2014
4CEY
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BU of 4cey by Molmil
Crystal structure of human Enterovirus 71 in complex with the uncoating inhibitor NLD
Descriptor: 1-(2-aminopyridin-4-yl)-3-[(3S)-5-{4-[(E)-(ethoxyimino)methyl]phenoxy}-3-methylpentyl]imidazolidin-2-one, SODIUM ION, VP1, ...
Authors:De Colibus, L, Wang, X, Spyrou, J.A.B, Kelly, J, Ren, J, Grimes, J, Puerstinger, G, Stonehouse, N, Walter, T.S, Hu, Z, Wang, J, Li, X, Peng, W, Rowlands, D, Fry, E.E, Rao, Z, Stuart, D.I.
Deposit date:2013-11-12
Release date:2014-02-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:More-Powerful Virus Inhibitors from Structure-Based Analysis of Hev71 Capsid-Binding Molecules
Nat.Struct.Mol.Biol., 21, 2014
7N9H
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BU of 7n9h by Molmil
Structure of the mammalian importin a1 bound to the TDP-43 NLS
Descriptor: Importin subunit alpha-1, TAR DNA-binding protein 43
Authors:Doll, S.G, Lokareddy, R.K, Cingolani, G.
Deposit date:2021-06-17
Release date:2022-06-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Recognition of the TDP-43 nuclear localization signal by importin alpha 1/ beta.
Cell Rep, 39, 2022
3L2A
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BU of 3l2a by Molmil
Crystal structure of Reston Ebola VP35 interferon inhibitory domain
Descriptor: ACETIC ACID, GLYCEROL, Polymerase cofactor VP35
Authors:Leung, D.W, Farahbakhsh, M, Borek, D.M, Prins, K.C, Basler, C.F, Amarasinghe, G.K.
Deposit date:2009-12-14
Release date:2010-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Structural and Functional Characterization of Reston Ebola Virus VP35 Interferon Inhibitory Domain.
J.Mol.Biol., 399, 2010
5ABJ
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BU of 5abj by Molmil
Structure of Coxsackievirus A16 in complex with GPP3
Descriptor: 1-[(3S)-5-[4-[(E)-ETHOXYIMINOMETHYL]PHENOXY]-3-METHYL-PENTYL]-3-PYRIDIN-4-YL-IMIDAZOLIDIN-2-ONE, CHLORIDE ION, SODIUM ION, ...
Authors:De Colibus, L, Wang, X, Tijsma, A, Neyts, J, Spyrou, J.A.B, Ren, J, Grimes, J.M, Puerstinger, G, Leyssen, P, Fry, E.E, Rao, Z, Stuart, D.I.
Deposit date:2015-08-06
Release date:2015-09-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure Elucidation of Coxsackievirus A16 in Complex with Gpp3 Informs a Systematic Review of Highly Potent Capsid Binders to Enteroviruses.
Plos Pathog., 11, 2015
7JXT
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BU of 7jxt by Molmil
Ovine COX-1 in complex with the subtype-selective derivative 2a
Descriptor: 2-[4,5-bis(2-chlorophenyl)-1H-imidazol-2-yl]-6-(prop-2-en-1-yl)phenyl methoxyacetate, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Ko, Y, Iaselli, M, Miciaccia, M, Friedrich, L, Schneider, G, Scilimati, A, Cingolani, G.
Deposit date:2020-08-27
Release date:2021-09-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Learning from Nature: From a Marine Natural Product to Synthetic Cyclooxygenase-1 Inhibitors by Automated De Novo Design.
Adv Sci, 8, 2021
1TUH
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BU of 1tuh by Molmil
Structure of Bal32a from a Soil-Derived Mobile Gene Cassette
Descriptor: ACETATE ION, hypothetical protein EGC068
Authors:Robinson, A, Wu, P.S.-C, Harrop, S.J, Schaeffer, P.M, Dixon, N.E, Gillings, M.R, Holmes, A.J, Nevalainen, K.M.H, Otting, G, Stokes, H.W, Curmi, P.M.G, Mabbutt, B.C.
Deposit date:2004-06-25
Release date:2004-07-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Integron-associated Mobile Gene Cassettes Code for Folded Proteins: The Structure of Bal32a, a New Member of the Adaptable alpha+beta Barrel Family
J.Mol.Biol., 346, 2005
4K6B
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BU of 4k6b by Molmil
Atomic structure of bacteriophage HS1 tail needle knob
Descriptor: GLUTAMIC ACID, HS1 knob domain, PHOSPHATE ION
Authors:Bhardwaj, A, Cingolani, G.
Deposit date:2013-04-15
Release date:2013-08-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.101 Å)
Cite:The tip of the tail needle affects the rate of DNA delivery by bacteriophage p22.
Plos One, 8, 2013
8UNG
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BU of 8ung by Molmil
Solution structure of toxin, U-RDTX-Pp19, from assassin bug Pristhesancus plagipennis
Descriptor: Venom peptide Pp19a
Authors:Chin, Y.K.Y, Walker, A.A, King, G.F.
Deposit date:2023-10-18
Release date:2024-05-29
Last modified:2024-07-03
Method:SOLUTION NMR
Cite:Structure and bioactivity of an insecticidal trans-defensin from assassin bug venom.
Structure, 2024
4KOA
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BU of 4koa by Molmil
Crystal Structure Analysis of 1,5-anhydro-D-fructose reductase from Sinorhizobium meliloti
Descriptor: 1,5-anhydro-D-fructose reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Schu, M, Faust, A, Stosik, B, Kohring, G.-W, Giffhorn, F, Scheidig, A.J.
Deposit date:2013-05-11
Release date:2013-08-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:The structure of substrate-free 1,5-anhydro-D-fructose reductase from Sinorhizobium meliloti 1021 reveals an open enzyme conformation.
Acta Crystallogr.,Sect.F, 69, 2013
3MJO
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BU of 3mjo by Molmil
Small subunit (R2F) of native ribonucleotide reductase from Corynebacterium ammoniagenes
Descriptor: MANGANESE (III) ION, Ribonucleotide reductase subunit R2F
Authors:Ogata, H, Stolle, P, Stehr, M, Auling, G, Lubitz, W.
Deposit date:2010-04-13
Release date:2010-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:A Tyrosyl-Dimanganese Coupled Spin System is the Native Metalloradical Cofactor of the R2F Subunit of the Ribonucleotide Reductase of Corynebacterium ammoniagenes.
J.Am.Chem.Soc., 132, 2010
3L29
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BU of 3l29 by Molmil
Crystal Structure of Zaire Ebola VP35 interferon inhibitory domain K319A/R322A mutant
Descriptor: CHLORIDE ION, Polymerase cofactor VP35
Authors:Leung, D.W, Ramanan, P, Borek, D.M, Amarasinghe, G.K.
Deposit date:2009-12-14
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mutations abrogating VP35 interaction with double-stranded RNA render ebola virus avirulent in guinea pigs.
J.Virol., 84, 2010
4CDQ
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BU of 4cdq by Molmil
Crystal structure of human Enterovirus 71 in complex with the uncoating inhibitor GPP2
Descriptor: 4-((5-(2-oxo-3-(pyridin-4-yl)imidazolidin-1-yl)pentyl)oxy)benzaldehyde O-ethyl oxime, SODIUM ION, VP1, ...
Authors:DeColibus, L, Wang, X, Spyrou, J.A.B, Kelly, J, Ren, J, Grimes, J, Puerstinger, G, Stonehouse, N, Walter, T.S, Hu, Z, Wang, J, Li, X, Peng, W, Rowlands, D, Fry, E.E, Rao, Z, Stuart, D.I.
Deposit date:2013-11-05
Release date:2014-02-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:More-Powerful Virus Inhibitors from Structure-Based Analysis of Hev71 Capsid-Binding Molecules
Nat.Struct.Mol.Biol., 21, 2014
6C54
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BU of 6c54 by Molmil
Ebola nucleoprotein nucleocapsid-like assembly and the asymmetric unit
Descriptor: Nucleoprotein
Authors:Su, Z, Wu, C, Pintilie, G.D, Chiu, W, Amarasinghe, G.K, Leung, D.W.
Deposit date:2018-01-13
Release date:2018-03-07
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (5.8 Å)
Cite:Electron Cryo-microscopy Structure of Ebola Virus Nucleoprotein Reveals a Mechanism for Nucleocapsid-like Assembly.
Cell, 172, 2018
4CEW
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BU of 4cew by Molmil
Crystal structure of human Enterovirus 71 in complex with the uncoating inhibitor ALD
Descriptor: 4-[3-[(3s)-5-[4-[(e)-ethoxyiminomethyl]phenoxy]-3-methyl-pentyl]-2-oxidanylidene-imidazolidin-1-yl]pyridine-2-carboxamide, VP1, VP2, ...
Authors:De Colibus, L, Wang, X, Spyrou, J.A.B, Kelly, J, Ren, J, Grimes, J, Puerstinger, G, Stonehouse, N, Walter, T.S, Hu, Z, Wang, J, Li, X, Peng, W, Rowlands, D, Fry, E.E, Rao, Z, Stuart, D.I.
Deposit date:2013-11-12
Release date:2014-02-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:More-Powerful Virus Inhibitors from Structure-Based Analysis of Hev71 Capsid-Binding Molecules.
Nat.Struct.Mol.Biol., 21, 2014
4D18
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BU of 4d18 by Molmil
Crystal structure of the COP9 signalosome
Descriptor: COP9 SIGNALOSOME COMPLEX SUBUNIT 1, COP9 SIGNALOSOME COMPLEX SUBUNIT 2, COP9 SIGNALOSOME COMPLEX SUBUNIT 3, ...
Authors:Bunker, R.D, Lingaraju, G.M, Thoma, N.H.
Deposit date:2014-05-01
Release date:2014-07-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (4.08 Å)
Cite:Crystal Structure of the Human Cop9 Signalosome
Nature, 512, 2014
1YR1
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BU of 1yr1 by Molmil
Structure of the major extracytoplasmic domain of the trans isomer of the bacterial cell division protein divib from geobacillus stearothermophilus
Descriptor: cell-division initiation protein
Authors:Robson, S.A, King, G.F.
Deposit date:2005-02-02
Release date:2006-02-07
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Domain architecture and structure of the bacterial cell division protein DivIB.
Proc.Natl.Acad.Sci.USA, 103, 2006
1TVJ
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BU of 1tvj by Molmil
Solution Structure of chick cofilin
Descriptor: Cofilin
Authors:Gorbatyuk, V.Y, Nosworthy, N.J, Robson, S.A, Maciejewski, M.W, dos Remedios, C.G, King, G.F.
Deposit date:2004-06-29
Release date:2005-09-20
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR Study of the Molecular Basis for Phosphoinositide Regulation of the Cofilin-Actin Interactions.
To be Published
1UAP
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BU of 1uap by Molmil
NMR structure of the NTR domain from human PCOLCE1
Descriptor: Procollagen C-proteinase enhancer protein
Authors:Liepinsh, E, Banyai, L, Pintacuda, G, Trexler, M, Patthy, L, Otting, G.
Deposit date:2003-03-14
Release date:2003-07-15
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR Structure of the Netrin-like Domain (NTR) of Human Type I Procollagen C-Proteinase Enhancer Defines Structural Consensus of NTR Domains and Assesses Potential Proteinase Inhibitory Activity and Ligand Binding.
J.Biol.Chem., 278, 2003
1B8W
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BU of 1b8w by Molmil
DEFENSIN-LIKE PEPTIDE 1
Descriptor: PROTEIN (DEFENSIN-LIKE PEPTIDE 1)
Authors:Torres, A.M, Wang, X, Fletcher, J.I, Alewood, D, Alewood, P.F, Smith, R, Simpson, R.J, Nicholson, G.M, Sutherland, S.K, Gallagher, C.H, King, G.F, Kuchel, P.W.
Deposit date:1999-02-02
Release date:1999-09-15
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of a defensin-like peptide from platypus venom.
Biochem.J., 341, 1999
1UCP
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BU of 1ucp by Molmil
NMR structure of the PYRIN domain of human ASC
Descriptor: Apoptosis-associated speck-like protein containing a CARD
Authors:Liepinsh, E, Barbals, R, Dahl, E, Sharipo, A, Staub, E, Otting, G.
Deposit date:2003-04-16
Release date:2003-11-04
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:The death-domain fold of the ASC PYRIN domain, presenting a basis for PYRIN/PYRIN recognition
J.Mol.Biol., 332, 2003
7LDK
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BU of 7ldk by Molmil
Structure of human respiratory syncytial virus nonstructural protein 2 (NS2)
Descriptor: CHLORIDE ION, D(-)-TARTARIC ACID, Non-structural protein 2
Authors:Chatterjee, S, Borek, D, Otwinowski, Z, Amarasinghe, G.K, Leung, D.W.
Deposit date:2021-01-13
Release date:2021-03-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Structural basis for IFN antagonism by human respiratory syncytial virus nonstructural protein 2.
Proc.Natl.Acad.Sci.USA, 118, 2021
1BIW
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BU of 1biw by Molmil
DESIGN AND SYNTHESIS OF CONFORMATIONALLY-CONSTRAINED MMP INHIBITORS
Descriptor: CALCIUM ION, N1-HYDROXY-2-(3-HYDROXY-PROPYL)-3-ISOBUTYL-N4-[1-(2-METHOXY-ETHYL)-2-OXO-AZEPAN-3-YL]-SUCCINAMIDE, PROTEIN (STROMELYSIN-1 COMPLEX), ...
Authors:Natchus, M.G, Cheng, M, Wahl, C.T, Pikul, S, Almstead, N.G, Bradley, R.S, Taiwo, Y.O, Mieling, G.E, Dunaway, C.M, Snider, C.E, McIver, J.M, Barnett, B.L, McPhail, S.J, Anastasio, M.B, De, B.
Deposit date:1998-06-19
Release date:1999-07-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Design and synthesis of conformationally-constrained MMP inhibitors.
Bioorg.Med.Chem.Lett., 8, 1998

222926

數據於2024-07-24公開中

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