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PDB: 9720 results

6ZN1
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Trehalose transferase bound to alpha-D-glucopyranosyl-beta-galactopyranose from Thermoproteus uzoniensis
Descriptor: DI(HYDROXYETHYL)ETHER, THIOCYANATE ION, Trehalose phosphorylase/synthase, ...
Authors:Bento, I, Mestrom, L, Marsden, S.R, van der Eijk, H, Laustsen, J.U, Jeffries, C.M, Svergun, D.I, Hagedoorn, P.-H, Hanefeld, U.
Deposit date:2020-07-06
Release date:2021-01-20
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Anomeric Selectivity of Trehalose Transferase with Rare l-Sugars.
ACS Catal, 10, 2020
3BS5
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BU of 3bs5 by Molmil
Crystal Structure of hCNK2-SAM/dHYP-SAM Complex
Descriptor: Connector enhancer of kinase suppressor of ras 2, Protein aveugle
Authors:Rajakulendran, T, Ceccarelli, D.F, Kurinov, I, Sicheri, F.
Deposit date:2007-12-22
Release date:2008-02-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:CNK and HYP form a discrete dimer by their SAM domains to mediate RAF kinase signaling.
Proc.Natl.Acad.Sci.USA, 105, 2008
6ZQP
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BU of 6zqp by Molmil
Structure of the Pmt2-MIR domain with bound ligands
Descriptor: GLYCEROL, PMT2 isoform 1, SULFATE ION, ...
Authors:Wild, K, Chiapparino, A, Hackmann, Y, Mortensen, S, Sinning, I.
Deposit date:2020-07-10
Release date:2020-12-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Functional implications of MIR domains in protein O -mannosylation.
Elife, 9, 2020
6ZXH
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BU of 6zxh by Molmil
Cryo-EM structure of a late human pre-40S ribosomal subunit - State H2
Descriptor: 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
Authors:Ameismeier, M, Zemp, I, van den Heuvel, J, Thoms, M, Berninghausen, O, Kutay, U, Beckmann, R.
Deposit date:2020-07-29
Release date:2020-12-16
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural basis for the final steps of human 40S ribosome maturation.
Nature, 587, 2020
3CC6
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BU of 3cc6 by Molmil
Crystal structure of kinase domain of protein tyrosine kinase 2 beta (PTK2B)
Descriptor: GLYCEROL, MAGNESIUM ION, Protein tyrosine kinase 2 beta
Authors:Busam, R.D, Lehtio, L, Karlberg, T, Arrowsmith, C.H, Bountra, C, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Helleday, T, Herman, M.D, Johansson, A, Johansson, I, Kallas, A, Kotenyova, T, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Svensson, L, Thorsell, A.G, Tresaugues, L, Van den Berg, S, Weigelt, J, Welin, M, Berglund, H, Structural Genomics Consortium (SGC)
Deposit date:2008-02-25
Release date:2008-03-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of Protein Tyrosine Kinase 2 Beta (PTK2B) Kinase domain.
To be Published
7AE8
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BU of 7ae8 by Molmil
Crystal structure of HEPN(R102A) toxin
Descriptor: ACETATE ION, HEPN toxin
Authors:Tamulaitiene, G, Sasnauskas, G, Songailiene, I, Juozapaitis, J, Siksnys, V.
Deposit date:2020-09-17
Release date:2020-12-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:HEPN-MNT Toxin-Antitoxin System: The HEPN Ribonuclease Is Neutralized by OligoAMPylation.
Mol.Cell, 80, 2020
6ZXG
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BU of 6zxg by Molmil
Cryo-EM structure of a late human pre-40S ribosomal subunit - State H1
Descriptor: 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
Authors:Ameismeier, M, Zemp, I, van den Heuvel, J, Thoms, M, Berninghausen, O, Kutay, U, Beckmann, R.
Deposit date:2020-07-29
Release date:2020-12-02
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural basis for the final steps of human 40S ribosome maturation.
Nature, 587, 2020
3BRM
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BU of 3brm by Molmil
Crystal structure of the covalent complex between the Bacillus subtilis glutaminase YbgJ and 5-oxo-L-norleucine formed by reaction of the protein with 6-diazo-5-oxo-L-norleucine
Descriptor: 5-OXO-L-NORLEUCINE, Glutaminase 1
Authors:Singer, A.U, Kim, Y, Dementieva, I, Vinokour, E, Joachimiak, A, Savchenko, A, Yakunin, A.
Deposit date:2007-12-21
Release date:2008-05-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Functional and structural characterization of four glutaminases from Escherichia coli and Bacillus subtilis.
Biochemistry, 47, 2008
4WYW
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BU of 4wyw by Molmil
Mutant K20E of 3D polymerase from Foot-and-Mouth Disease Virus
Descriptor: ACETATE ION, GLYCEROL, RNA-directed RNA polymerase 3D-POL, ...
Authors:Ferrer-Orta, C, Verdaguer, N, de la Higuera, I, Domingo, E.
Deposit date:2014-11-18
Release date:2015-05-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Multifunctionality of a picornavirus polymerase domain: nuclear localization signal and nucleotide recognition.
J.Virol., 89, 2015
4X35
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BU of 4x35 by Molmil
A micro-patterned silicon chip as sample holder for macromolecular crystallography experiments with minimal background scattering
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Roedig, P, Vartiainen, I, Duman, R, Panneerselvam, S, Stuebe, N, Lorbeer, O, Warmer, M, Sutton, G, Stuart, D.I, Weckert, E, David, C, Wagner, A, Meents, A.
Deposit date:2014-11-27
Release date:2015-06-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A micro-patterned silicon chip as sample holder for macromolecular crystallography experiments with minimal background scattering.
Sci Rep, 5, 2015
6ZMP
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BU of 6zmp by Molmil
Crystal structure of Chaetomium thermophilum Naa20 in complex with a bisubstrate analogue
Descriptor: CARBOXYMETHYL COENZYME *A, CMC-MET-ASP-GLU-LEU, N-terminal acetyltransferase-like protein
Authors:Layer, D, Kopp, J, Sinning, I.
Deposit date:2020-07-03
Release date:2020-12-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Structural basis of Naa20 activity towards a canonical NatB substrate.
Commun Biol, 4, 2021
4X3V
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BU of 4x3v by Molmil
Crystal structure of human ribonucleotide reductase 1 bound to inhibitor
Descriptor: N~6~-{N-[(1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)acetyl]-2-methyl-D-alanyl}-D-lysine, Ribonucleoside-diphosphate reductase large subunit, THYMIDINE-5'-TRIPHOSPHATE
Authors:Dealwis, C.G, Ahmad, M.F, Alam, I.
Deposit date:2014-12-01
Release date:2015-11-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Identification of Non-nucleoside Human Ribonucleotide Reductase Modulators.
J.Med.Chem., 58, 2015
3C5R
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BU of 3c5r by Molmil
Crystal Structure of the BARD1 Ankyrin Repeat Domain and Its Functional Consequences
Descriptor: BRCA1-associated RING domain protein 1
Authors:Fox III, D, Le Trong, I, Stenkamp, R.E, Klevit, R.E.
Deposit date:2008-02-01
Release date:2008-05-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the BARD1 Ankyrin Repeat Domain and Its Functional Consequences.
J.Biol.Chem., 283, 2008
6ZQ3
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BU of 6zq3 by Molmil
Crystal Structure of Silicatein Alpha from Marine Sponge Tethya aurantium
Descriptor: Silicatein alpha
Authors:Goerlich, S, Leonarski, R.J, Tomizaki, T, Zlotnikov, I.
Deposit date:2020-07-09
Release date:2020-12-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Natural hybrid silica/protein superstructure at atomic resolution.
Proc.Natl.Acad.Sci.USA, 117, 2020
2QCB
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BU of 2qcb by Molmil
T7-tagged full-length streptavidin complexed with ruthenium ligand
Descriptor: N-(4-{[(2-AMINOETHYL)AMINO]SULFONYL}PHENYL)-5-[(3AS,4S,6AR)-2-OXOHEXAHYDRO-1H-THIENO[3,4-D]IMIDAZOL-4-YL]PENTANAMIDE-(1,2,3,4,5,6-ETA)-BENZENE-CHLORO-RUTHENIUM(III), Streptavidin
Authors:Le Trong, I, Creus, M, Pordea, A, Ward, T.R, Stenkamp, R.E.
Deposit date:2007-06-19
Release date:2008-04-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:X-ray structure and designed evolution of an artificial transfer hydrogenase
Angew.Chem.Int.Ed.Engl., 47, 2008
4X6G
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BU of 4x6g by Molmil
Full-length OxyR C199D from pseudomonas aeruginosa
Descriptor: GLYCEROL, HYDROGEN PEROXIDE, OxyR
Authors:Jo, I, Ha, N.C.
Deposit date:2014-12-08
Release date:2015-04-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural details of the OxyR peroxide-sensing mechanism
Proc.Natl.Acad.Sci.USA, 112, 2015
3C5N
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BU of 3c5n by Molmil
Structure of human TULP1 in complex with IP3
Descriptor: D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, Tubby-related protein 1
Authors:Busam, R.D, Lehtio, L, Arrowsmith, C.H, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Hallberg, B.M, Herman, M.D, Johansson, A, Johansson, I, Kallas, A, Karlberg, T, Kotenyova, T, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Svensson, L, Thorsell, A.G, Tresaugues, L, Van den Berg, S, Weigelt, J, Welin, M, Berglund, H, Structural Genomics Consortium (SGC)
Deposit date:2008-01-31
Release date:2008-04-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of human TULP1 in complex with IP3
To be published
3C9X
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BU of 3c9x by Molmil
Crystal structure of Trichoderma reesei aspartic proteinase
Descriptor: GLYCEROL, Trichoderma reesei Aspartic protease
Authors:Nascimento, A.S, Krauchenco, S, Golubev, A.M, Gustchina, A, Wlodawer, A, Polikarpov, I.
Deposit date:2008-02-19
Release date:2008-08-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Statistical coupling analysis of aspartic proteinases based on crystal structures of the Trichoderma reesei enzyme and its complex with pepstatin A.
J.Mol.Biol., 382, 2008
3CC9
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BU of 3cc9 by Molmil
Crystal structure of Plasmodium vivax putative polyprenyl pyrophosphate synthase in complex with geranylgeranyl diphosphate
Descriptor: GERANYLGERANYL DIPHOSPHATE, Putative farnesyl pyrophosphate synthase, SODIUM ION
Authors:Wernimont, A.K, Dunford, J, Lew, J, Zhao, Y, Kozieradzki, I, Cossar, D, Schapira, M, Bochkarev, A, Arrowsmith, C.H, Bountra, C, Weigelt, J, Edwards, A.M, Hui, R, Artz, J.D, Structural Genomics Consortium (SGC)
Deposit date:2008-02-25
Release date:2008-03-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of Plasmodium vivax putative polyprenyl pyrophosphate synthase in complex with geranylgeranyl diphosphate.
To be Published
3CD8
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BU of 3cd8 by Molmil
X-ray Structure of c-Met with triazolopyridazine Inhibitor.
Descriptor: 7-methoxy-4-[(6-phenyl[1,2,4]triazolo[4,3-b]pyridazin-3-yl)methoxy]quinoline, Hepatocyte growth factor receptor
Authors:Bellon, S.F, Albrecht, B.K, Harmange, J.-C, Bauer, D, Choquette, D, Dussault, I.
Deposit date:2008-02-26
Release date:2008-04-29
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery and Optimization of Triazolopyridazines as Potent and Selective Inhibitors of the c-Met Kinase.
J.Med.Chem., 51, 2008
3CE7
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BU of 3ce7 by Molmil
Crystal structure of toxoplasma specific mitochondrial acyl carrier protein, 59.m03510
Descriptor: Specific mitochondrial acyl carrier protein
Authors:Wernimont, A.K, Dong, A, Yang, C, Khuu, C, Lam, A, Brand, V, Kozieradzki, I, Cossar, D, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Weigelt, J, Bochkarev, A, Hui, R, Qiu, W, Structural Genomics Consortium (SGC)
Deposit date:2008-02-28
Release date:2008-03-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structure of toxoplasma specific mitochondrial acyl carrier protein, 59.m03510.
To be Published
3CBK
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BU of 3cbk by Molmil
chagasin-cathepsin B
Descriptor: Cathepsin B, Chagasin
Authors:Redzynia, I, Bujacz, G.D, Abrahamson, M, Ljunggren, A, Jaskolski, M, Mort, J.S.
Deposit date:2008-02-22
Release date:2008-05-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Displacement of the occluding loop by the parasite protein, chagasin, results in efficient inhibition of human cathepsin B.
J.Biol.Chem., 283, 2008
5LN1
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BU of 5ln1 by Molmil
STRUCTURE OF UBIQUITYLATED-RPN10 FROM YEAST;
Descriptor: 26S proteasome regulatory subunit RPN10, Polyubiquitin-B
Authors:Keren-Kaplan, T, Attali, I, Levin-Kravets, O, Prag, G.
Deposit date:2016-08-02
Release date:2016-10-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.14 Å)
Cite:Structure of ubiquitylated-Rpn10 provides insight into its autoregulation mechanism.
Nat Commun, 7, 2016
1MMA
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BU of 1mma by Molmil
X-RAY STRUCTURES OF THE MGADP, MGATPGAMMAS, AND MGAMPPNP COMPLEXES OF THE DICTYOSTELIUM DISCOIDEUM MYOSIN MOTOR DOMAIN
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, MYOSIN
Authors:Gulick, A.M, Bauer, C.B, Thoden, J.B, Rayment, I.
Deposit date:1997-07-18
Release date:1997-12-03
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray structures of the MgADP, MgATPgammaS, and MgAMPPNP complexes of the Dictyostelium discoideum myosin motor domain.
Biochemistry, 36, 1997
1MMG
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BU of 1mmg by Molmil
X-RAY STRUCTURES OF THE MGADP, MGATPGAMMAS, AND MGAMPPNP COMPLEXES OF THE DICTYOSTELIUM DISCOIDEUM MYOSIN MOTOR DOMAIN
Descriptor: MAGNESIUM ION, MYOSIN, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Gulick, A.M, Bauer, C.B, Thoden, J.B, Rayment, I.
Deposit date:1997-07-18
Release date:1997-12-03
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray structures of the MgADP, MgATPgammaS, and MgAMPPNP complexes of the Dictyostelium discoideum myosin motor domain.
Biochemistry, 36, 1997

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