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PDB: 17822 results

4NRA
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Crystal Structure of the bromodomain of human BAZ2B in complex with compound-6 E11322
Descriptor: 1,2-ETHANEDIOL, 1-(8-chloro-1,3,4,5-tetrahydro-2H-pyrido[4,3-b]indol-2-yl)ethanone, Bromodomain adjacent to zinc finger domain protein 2B
Authors:Chaikuad, A, Felletar, I, Ferguson, F.M, Filippakopoulos, P, Fedorov, O, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2013-11-26
Release date:2013-12-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Targeting low-druggability bromodomains: fragment based screening and inhibitor design against the BAZ2B bromodomain.
J.Med.Chem., 56, 2013
4NNB
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Binary complex of ObcA with oxaloacetate
Descriptor: MAGNESIUM ION, OBCA, Oxalate Biosynthetic Component A, ...
Authors:Oh, J.T, Goo, E, Hwang, I, Rhee, S.
Deposit date:2013-11-17
Release date:2014-03-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for Bacterial Quorum Sensing-mediated Oxalogenesis.
J.Biol.Chem., 289, 2014
4NR7
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Crystal structure of the bromodomain of human CREBBP in complex with an isoxazolyl-benzimidazole ligand
Descriptor: 1,2-ETHANEDIOL, 2-[2-(3-chloro-4-methoxyphenyl)ethyl]-5-(3,5-dimethyl-1,2-oxazol-4-yl)-1-[(2S)-2-(morpholin-4-yl)propyl]-1H-benzimidazole, CREB-binding protein
Authors:Filippakopoulos, P, Picaud, S, Felletar, I, Hay, D, Fedorov, O, Martin, S, Krojer, T, Nowak, R, von Delft, F, Brennan, P, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2013-11-26
Release date:2013-12-18
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal structure of the bromodomain of human CREBBP in complex with an isoxazolyl-benzimidazole ligand
To be Published
4BX4
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Fitting of the bacteriophage Phi8 P1 capsid protein into cryo-EM density
Descriptor: P1
Authors:El Omari, K, Sutton, G, Ravantti, J.J, Zhang, H, Walter, T.S, Grimes, J.M, Bamford, D.H, Stuart, D.I, Mancini, E.J.
Deposit date:2013-07-08
Release date:2013-08-07
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (8.7 Å)
Cite:Plate Tectonics of Virus Shell Assembly and Reorganization in Phage Phi8, a Distant Relative of Mammalian Reoviruses
Structure, 21, 2013
4NLI
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Crystal structure of sheep beta-lactoglobulin (space group P3121)
Descriptor: Beta-lactoglobulin-1/B, SULFATE ION
Authors:Loch, J.I, Molenda, M, Kopec, M, Swiatek, S, Lewinski, K.
Deposit date:2013-11-14
Release date:2014-03-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of two crystal forms of sheep beta-lactoglobulin with EF-loop in closed conformation
Biopolymers, 101, 2014
5VRT
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Nonheme Iron Replacement in a Biosynthetic Nitric Oxide Reductase Model Performing O2 Reduction to Water: Co-bound FeBMb
Descriptor: COBALT (II) ION, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Reed, J, Shi, Y, Zhu, Q, Chakraborty, S, Mirs, E.N, Petrik, I.D, Bhagi-Damodaran, A, Ross, M, Moenne-Loccoz, P, Zhang, Y, Lu, Y.
Deposit date:2017-05-11
Release date:2017-08-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.995 Å)
Cite:Manganese and Cobalt in the Nonheme-Metal-Binding Site of a Biosynthetic Model of Heme-Copper Oxidase Superfamily Confer Oxidase Activity through Redox-Inactive Mechanism.
J. Am. Chem. Soc., 139, 2017
4NV7
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Crystal Structure of Mesorhizobium Loti Arylamine N-acetyltransferase 1 In Complex With CoA
Descriptor: Arylamine N-acetyltransferase, COENZYME A
Authors:Xu, X.M, Haouz, A, Weber, P, Li de la sierra-gallay, I, Kubiak, X, Dupret, J.-M, Rodrigues-lima, F.
Deposit date:2013-12-05
Release date:2015-01-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Insight into cofactor recognition in arylamine N-acetyltransferase enzymes: structure of Mesorhizobium loti arylamine N-acetyltransferase in complex with coenzyme A.
Acta Crystallogr.,Sect.D, 71, 2015
4BG0
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Crystal structure of complement factors H and FHL-1 binding protein BBH06 or CRASP-2 from Borrelia burgdorferi
Descriptor: COMPLEMENT REGULATOR-ACQUIRING SURFACE PROTEIN 2 (CRASP-2 (CRASP-2)
Authors:Brangulis, K, Petrovskis, I, Baumanis, V, Tars, K.
Deposit date:2013-03-22
Release date:2014-04-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Characterization of Cspz, a Complement Regulator Factor H and Fhl-1 Binding Protein from Borrelia Burgdorferi.
FEBS J., 281, 2014
4AQI
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Structure of human S100A15 bound to zinc and calcium
Descriptor: CALCIUM ION, CHLORIDE ION, PROTEIN S100-A7A, ...
Authors:Murray, J.I, Tonkin, M.L, Whiting, A.L, Peng, F, Farnell, B, Hof, F, Boulanger, M.J.
Deposit date:2012-04-17
Release date:2012-10-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Characterization of S100A15 Reveals a Novel Zinc Coordination Site Among S100 Proteins and Altered Surface Chemistry with Functional Implications for Receptor Binding.
Bmc Struct.Biol., 12, 2012
4NUJ
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Crystal structure of HIV-1 broadly neutralizing antibody PGT152
Descriptor: PGT152 heavy chain, PGT152 light chain
Authors:Blattner, C, Wilson, I.A.
Deposit date:2013-12-03
Release date:2014-05-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.827 Å)
Cite:Structural Delineation of a Quaternary, Cleavage-Dependent Epitope at the gp41-gp120 Interface on Intact HIV-1 Env Trimers.
Immunity, 40, 2014
4BJJ
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Sfc1-Sfc7 dimerization module
Descriptor: MERCURY (II) ION, TRANSCRIPTION FACTOR TAU SUBUNIT SFC1, TRANSCRIPTION FACTOR TAU SUBUNIT SFC7
Authors:Taylor, N.M.I, Baudin, F, von Scheven, G, Muller, C.W.
Deposit date:2013-04-18
Release date:2013-07-31
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:RNA Polymerase III-Specific General Transcription Factor Iiic Contains a Heterodimer Resembling Tfiif RAP30/RAP74.
Nucleic Acids Res., 41, 2013
4AK0
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Ligand controlled assembly of hexamers, dihexamers, and linear multihexamer structures by an engineered acylated insulin
Descriptor: INSULIN A CHAIN, INSULIN B CHAIN
Authors:Steensgaard, D.B, Schluckebier, G, Strauss, H.M, Norrman, M, Thomsen, J.K, Friderichsen, A.V, Havelund, S, Jonassen, I.
Deposit date:2012-02-21
Release date:2013-01-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Ligand Controlled Assembly of Hexamers, Dihexamers, and Linear Multihexamer Structures by the Engineered Acylated Insulin Degludec.
Biochemistry, 52, 2013
4NU9
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2.30 Angstrom resolution crystal structure of betaine aldehyde dehydrogenase (betB) from Staphylococcus aureus with BME-free Cys289
Descriptor: Betaine aldehyde dehydrogenase, SODIUM ION
Authors:Halavaty, A.S, Minasov, G, Dubrovska, I, Stam, J, Shuvalova, L, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-12-03
Release date:2013-12-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and functional analysis of betaine aldehyde dehydrogenase from Staphylococcus aureus.
Acta Crystallogr.,Sect.D, 71, 2015
5VR3
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Crystal structure of the BRS domain of BRAF
Descriptor: BRAF, SULFATE ION
Authors:Thevakumaran, N, Maisonneuve, P, Kurinov, I, Lavoie, H, Marullo, S.A, Sahmi, M, Jin, T, Therrien, M, Sicheri, F.
Deposit date:2017-05-10
Release date:2018-02-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:MEK drives BRAF activation through allosteric control of KSR proteins.
Nature, 554, 2018
3SC7
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First crystal structure of an endo-inulinase, from Aspergillus ficuum: structural analysis and comparison with other GH32 enzymes.
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Inulinase, alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose, ...
Authors:Housen, I, Pouyez, J, Roussel, G, Mayard, A, Vandamme, A.M, Wouters, J, Michaux, C.
Deposit date:2011-06-07
Release date:2012-06-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:First crystal structure of an endo-inulinase, INU2, from Aspergillus ficuum: Discovery of an extra-pocket in the catalytic domain responsible for its endo-activity.
Biochimie, 94, 2012
4NXY
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Crystal Structure of the GNAT domain of S. lividans PAT
Descriptor: Acyl-CoA synthetase, GLYCEROL, TRIFLUOROETHANOL
Authors:Rank, K.C, Tucker, A.C, Escalante-Semerena, J.C, Rayment, I.
Deposit date:2013-12-09
Release date:2014-11-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.449 Å)
Cite:Insights into the specificity of lysine acetyltransferases.
J.Biol.Chem., 289, 2014
5W2F
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BU of 5w2f by Molmil
Crystal Structure of the C-terminal Domain of Human eIF2D at 1.4 A resolution
Descriptor: Eukaryotic translation initiation factor 2D, FORMIC ACID
Authors:Vaidya, A.T, Lomakin, I.B, Joseph, N.N, Dmitriev, S.E, Steitz, T.A.
Deposit date:2017-06-06
Release date:2017-08-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structure of the C-terminal Domain of Human eIF2D and Its Implications on Eukaryotic Translation Initiation.
J. Mol. Biol., 429, 2017
5W1N
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Crystal structure of the human astrovirus 2 Oxford serotype capsid protein spike at 1.35-A resolution
Descriptor: Capsid polyprotein VP90
Authors:Bogdanoff, W.A, Perez, E.I, DuBois, R.M.
Deposit date:2017-06-04
Release date:2017-11-08
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.348 Å)
Cite:Structural Basis for Escape of Human Astrovirus from Antibody Neutralization: Broad Implications for Rational Vaccine Design.
J. Virol., 92, 2018
4O1Y
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Crystal structure of Porcine Pancreatic Phospholipase A2 in complex with 1-Naphthaleneacetic acid
Descriptor: CALCIUM ION, NAPHTHALEN-1-YL-ACETIC ACID, Phospholipase A2, ...
Authors:Dileep, K.V, Remya, C, Tintu, I, Mandal, P.K, Karthe, P, Haridas, M, Sadasivan, C.
Deposit date:2013-12-16
Release date:2014-01-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Porcine Pancreatic Phospholipase A2 in complex with 1-Naphthaleneacetic acid
To be published
4F1O
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Crystal Structure of the L1180T mutant Roco4 Kinase Domain from D. discoideum bound to AppCp
Descriptor: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, Serine/threonine-protein kinase roco4
Authors:Gilsbach, B.K, Vetter, I.R, Wittinghofer, A, Kortholt, A.
Deposit date:2012-05-07
Release date:2012-06-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Roco kinase structures give insights into the mechanism of Parkinson disease-related leucine-rich-repeat kinase 2 mutations.
Proc.Natl.Acad.Sci.USA, 109, 2012
4F1T
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Crystal Structure of the Roco4 Kinase Domain from D. discoideum bound to the ROCK Inhibitor H1152
Descriptor: (S)-2-METHYL-1-[(4-METHYL-5-ISOQUINOLINE)SULFONYL]-HOMOPIPERAZINE, Serine/threonine-protein kinase roco4
Authors:Gilsbach, B.K, Vetter, I.R, Wittinghofer, A, Kortholt, A.
Deposit date:2012-05-07
Release date:2012-06-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Roco kinase structures give insights into the mechanism of Parkinson disease-related leucine-rich-repeat kinase 2 mutations.
Proc.Natl.Acad.Sci.USA, 109, 2012
4FH3
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Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity
Descriptor: Poly(A) RNA polymerase protein cid1
Authors:Lunde, B.M, Magler, I, Meinhart, A.
Deposit date:2012-06-05
Release date:2012-08-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the Cid1 poly (U) polymerase reveal the mechanism for UTP selectivity.
Nucleic Acids Res., 40, 2012
3TS9
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BU of 3ts9 by Molmil
Crystal Structure of the MDA5 Helicase Insert Domain
Descriptor: Interferon-induced helicase C domain-containing protein 1, SULFATE ION
Authors:Berke, I.C, Modis, Y.
Deposit date:2011-09-12
Release date:2012-02-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:MDA5 cooperatively forms dimers and ATP-sensitive filaments upon binding double-stranded RNA.
Embo J., 31, 2012
4FCU
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1.9 Angstrom Crystal Structure of 3-deoxy-manno-octulosonate Cytidylyltransferase (kdsB) from Acinetobacter baumannii without His-Tag Bound to the Active Site
Descriptor: 3-deoxy-manno-octulosonate cytidylyltransferase
Authors:Minasov, G, Halavaty, A, Shuvalova, L, Dubrovska, I, Winsor, J, Papazisi, L, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-05-25
Release date:2012-06-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:1.9 Angstrom Crystal Structure of 3-deoxy-manno-octulosonate Cytidylyltransferase (kdsB) from Acinetobacter baumannii without His-Tag Bound to the Active Site.
TO BE PUBLISHED
4EYR
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BU of 4eyr by Molmil
Crystal structure of multidrug-resistant clinical isolate 769 HIV-1 protease in complex with ritonavir
Descriptor: HIV-1 PROTEASE, RITONAVIR
Authors:Liu, Z, Yedidi, R.S, Wang, Y, Brunzelle, J.S, Kovari, I.A, Kovari, L.C.
Deposit date:2012-05-01
Release date:2013-01-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Insights into the mechanism of drug resistance: X-ray structure analysis of multi-drug resistant HIV-1 protease ritonavir complex.
Biochem.Biophys.Res.Commun., 431, 2013

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