Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 17965 results

1SW7
DownloadVisualize
BU of 1sw7 by Molmil
Triosephosphate isomerase from Gallus gallus, loop 6 mutant K174N, T175S, A176S
Descriptor: 2-PHOSPHOGLYCOLIC ACID, Triosephosphate isomerase
Authors:Kursula, I, Salin, M, Sun, J, Norledge, B.V, Haapalainen, A.M, Sampson, N.S, Wierenga, R.K.
Deposit date:2004-03-30
Release date:2004-08-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Understanding protein lids: structural analysis of active hinge mutants in triosephosphate isomerase
Protein Eng.Des.Sel., 17, 2004
1SV1
DownloadVisualize
BU of 1sv1 by Molmil
NMR structure of the ThKaiA180C-CIIABD complex (25-structure ensemble)
Descriptor: Circadian clock protein KaiA, Circadian clock protein KaiC
Authors:Vakonakis, I, LiWang, A.C.
Deposit date:2004-03-26
Release date:2004-08-03
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of the C-terminal domain of the clock protein KaiA in complex with a KaiC-derived peptide: implications for KaiC regulation.
Proc.Natl.Acad.Sci.Usa, 101, 2004
1MIE
DownloadVisualize
BU of 1mie by Molmil
Crystal Structure Of The Fab Fragment of Esterolytic Antibody MS5-393
Descriptor: IMMUNOGLOBULIN MS5-393
Authors:Ruzheinikov, S.N, Muranova, T.A, Sedelnikova, S.E, Partridge, L.J, Blackburn, G.M, Murray, I.A, Kakinuma, H, Takashi, N, Shimazaki, K, Sun, J, Nishi, Y, Rice, D.W.
Deposit date:2002-08-23
Release date:2003-09-23
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:High-resolution crystal structure of the Fab-fragments of a family of mouse catalytic antibodies with esterase activity
J.Mol.Biol., 332, 2003
4A8F
DownloadVisualize
BU of 4a8f by Molmil
Non-Catalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial dsRNA virus phi6 from De Novo Initiation to Elongation
Descriptor: 5'-D(*DAP*GP*CP*GP)-3', ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Wright, S, Poranen, M.M, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2011-11-21
Release date:2012-07-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Noncatalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial Double-Stranded RNA Virus Phi6 from De Novo Initiation to Elongation.
J.Virol., 86, 2012
1MJH
DownloadVisualize
BU of 1mjh by Molmil
Structure-based assignment of the biochemical function of hypothetical protein MJ0577: A test case of structural genomics
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, PROTEIN (ATP-BINDING DOMAIN OF PROTEIN MJ0577)
Authors:Zarembinski, T.I, Hung, L.-W, Mueller-Dieckmann, H.J, Kim, K.-K, Yokota, H, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:1998-11-04
Release date:1998-12-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-based assignment of the biochemical function of a hypothetical protein: a test case of structural genomics.
Proc.Natl.Acad.Sci.USA, 95, 1998
1SZN
DownloadVisualize
BU of 1szn by Molmil
THE STRUCTURE OF ALPHA-GALACTOSIDASE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Golubev, A.M, Nagem, R.A.P, Brando Neto, J.R, Neustroev, K.N, Eneyskaya, E.V, Kulminskaya, A.A, Shabalin, K.A, Savel'ev, A.N, Polikarpov, I.
Deposit date:2004-04-06
Release date:2004-08-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Crystal structure of alpha-galactosidase from Trichoderma reesei and its complex with galactose: implications for catalytic mechanism.
J.Mol.Biol., 339, 2004
2EX2
DownloadVisualize
BU of 2ex2 by Molmil
Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli
Descriptor: GLYCEROL, Penicillin-binding protein 4
Authors:Kishida, H, Unzai, S, Roper, D.I, Lloyd, A, Park, S.-Y, Tame, J.R.H.
Deposit date:2005-11-07
Release date:2006-06-13
Last modified:2016-10-19
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, both in the native form and covalently linked to various antibiotics
Biochemistry, 45, 2006
1LZA
DownloadVisualize
BU of 1lza by Molmil
DISSECTION OF PROTEIN-CARBOHYDRATE INTERACTIONS IN MUTANT HEN EGG-WHITE LYSOZYME COMPLEXES AND THEIR HYDROLYTIC ACTIVITY
Descriptor: HEN EGG WHITE LYSOZYME
Authors:Maenaka, K, Matsushima, M, Song, H, Watanabe, K, Kumagai, I.
Deposit date:1995-02-10
Release date:1995-05-08
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Dissection of protein-carbohydrate interactions in mutant hen egg-white lysozyme complexes and their hydrolytic activity.
J.Mol.Biol., 247, 1995
1LZL
DownloadVisualize
BU of 1lzl by Molmil
Bacterial Heroin Esterase
Descriptor: HEROIN ESTERASE
Authors:Zhu, X, Larsen, N.A, Basran, A, Bruce, N.C, Wilson, I.A.
Deposit date:2002-06-10
Release date:2003-01-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:OBSERVATION OF AN ARSENIC ADDUCT IN AN ACETYL ESTERASE CRYSTAL STRUCTURE
J.Biol.Chem., 278, 2003
1T0O
DownloadVisualize
BU of 1t0o by Molmil
The structure of alpha-galactosidase from Trichoderma reesei complexed with beta-D-galactose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Golubev, A.M, Nagem, R.A.P, Brandao Neto, J.R, Neustroev, K.N, Eneyskaya, E.V, Kulminskaya, A.A, Shabalin, K.A, Savel'ev, A.N, Polikarpov, I.
Deposit date:2004-04-12
Release date:2004-10-12
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal structure of alpha-galactosidase from Trichoderma reesei and its complex with galactose: implications for catalytic mechanism
J.Mol.Biol., 339, 2004
2QRF
DownloadVisualize
BU of 2qrf by Molmil
Green Fluorescent Protein: Cyclized-only Intermediate of Chromophore Maturation in the Q183E variant
Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein, MAGNESIUM ION
Authors:Wood, T.I, Barondeau, D.P, Hitomi, C, Tainer, J.A, Getzoff, E.D.
Deposit date:2007-07-28
Release date:2009-04-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Green Fluorescent Protein Chromophore - Cyclized Intermediate
To be Published
2QSA
DownloadVisualize
BU of 2qsa by Molmil
Crystal structure of J-domain of DnaJ homolog dnj-2 precursor from C.elegans.
Descriptor: CHLORIDE ION, DnaJ homolog dnj-2
Authors:Osipiuk, J, Mulligan, R, Gu, M, Voisine, C, Morimoto, R.I, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-07-30
Release date:2007-08-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:X-ray crystal structure of J-domain of DnaJ homolog dnj-2 precursor from C.elegans.
To be Published
1T3K
DownloadVisualize
BU of 1t3k by Molmil
NMR structure of a CDC25-like dual-specificity tyrosine phosphatase of Arabidopsis thaliana
Descriptor: Dual-specificity tyrosine phosphatase, ZINC ION
Authors:Landrieu, I, da Costa, M, De Veylder, L, Dewitte, F, Vandepoele, K, Hassan, S, Wieruszeski, J.M, Faure, J.D, Inze, D, Lippens, G.
Deposit date:2004-04-27
Release date:2004-09-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A small CDC25 dual-specificity tyrosine-phosphatase isoform in Arabidopsis thaliana.
Proc.Natl.Acad.Sci.Usa, 101, 2004
2QT4
DownloadVisualize
BU of 2qt4 by Molmil
Atomic-resolution crystal structure of the natural form of Scytovirin
Descriptor: scytovirin
Authors:Moulaei, T, Botos, I, Ziolkowska, N.E, Dauter, Z, Wlodawer, A.
Deposit date:2007-08-01
Release date:2007-11-27
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Atomic-resolution crystal structure of the antiviral lectin scytovirin.
Protein Sci., 16, 2007
1T4Y
DownloadVisualize
BU of 1t4y by Molmil
Solution structure of the N-terminal domain of Synechococcus elongatus SasA (average minimized structure)
Descriptor: Adaptive-response sensory-kinase sasA
Authors:Vakonakis, I, Klewer, D.A, LiWang, A.C.
Deposit date:2004-04-30
Release date:2004-11-16
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of the N-terminal domain of the circadian clock-associated histidine kinase SasA.
J.Mol.Biol., 342, 2004
1T5Q
DownloadVisualize
BU of 1t5q by Molmil
Solution Structure of GIP(1-30)amide in TFE/Water
Descriptor: Gastric inhibitory polypeptide
Authors:Alana, I, Hewage, C.M, Malthouse, J.P.G, Parker, J.C, Gault, V.A, O'Harte, F.P.M.
Deposit date:2004-05-05
Release date:2004-11-16
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of the glucose-dependent insulinotropic polypeptide fragment, GIP(1-30)amide.
Biochem.Biophys.Res.Commun., 325, 2004
5ZHP
DownloadVisualize
BU of 5zhp by Molmil
M3 muscarinic acetylcholine receptor in complex with a selective antagonist
Descriptor: (1R,2R,4S,5S,7s)-7-({[4-fluoro-2-(thiophen-2-yl)phenyl]carbamoyl}oxy)-9,9-dimethyl-3-oxa-9-azatricyclo[3.3.1.0~2,4~]nonan-9-ium, CITRIC ACID, HEXAETHYLENE GLYCOL, ...
Authors:Liu, H, Hofmann, J, Fish, I, Schaake, B, Eitel, K, Bartuschat, A, Kaindl, J, Rampp, H, Banerjee, A, Hubner, H, Clark, M.J, Vincent, S.G, Fisher, J, Heinrich, M, Hirata, K, Liu, X, Sunahara, R.K, Shoichet, B.K, Kobilka, B.K, Gmeiner, P.
Deposit date:2018-03-13
Release date:2018-11-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure-guided development of selective M3 muscarinic acetylcholine receptor antagonists
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2QBN
DownloadVisualize
BU of 2qbn by Molmil
Crystal structure of ferric G248V cytochrome P450cam
Descriptor: CAMPHOR, Cytochrome P450-cam, POTASSIUM ION, ...
Authors:von Koenig, K, Makris, T.M, Sligar, S.D, Schlichting, I.
Deposit date:2007-06-18
Release date:2007-12-25
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Alteration of P450 Distal Pocket Solvent Leads to Impaired Proton Delivery and Changes in Heme Geometry.
Biochemistry, 46, 2007
2EV5
DownloadVisualize
BU of 2ev5 by Molmil
Bacillus subtilis manganese transport regulator (MNTR) bound to calcium
Descriptor: CALCIUM ION, Transcriptional regulator mntR
Authors:Kliegman, J.I, Griner, S.L, Helmann, J.D, Brennan, R.G, Glasfeld, A.
Deposit date:2005-10-31
Release date:2006-03-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for the Metal-Selective Activation of the Manganese Transport Regulator of Bacillus subtilis.
Biochemistry, 45, 2006
1T15
DownloadVisualize
BU of 1t15 by Molmil
Crystal Structure of the Brca1 BRCT Domains in Complex with the Phosphorylated Interacting Region from Bach1 Helicase
Descriptor: BRCA1 interacting protein C-terminal helicase 1, Breast cancer type 1 susceptibility protein
Authors:Clapperton, J.A, Manke, I.A, Lowery, D.M, Ho, T, Haire, L.F, Yaffe, M.B, Smerdon, S.J.
Deposit date:2004-04-15
Release date:2004-05-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure and mechanism of BRCA1 BRCT domain recognition of phosphorylated BACH1 with implications for cancer
Nat.Struct.Mol.Biol., 11, 2004
4AH9
DownloadVisualize
BU of 4ah9 by Molmil
Parallel screening of a low molecular weight compound library: do differences in methodology affect hit identification
Descriptor: 1,2-ETHANEDIOL, 1-(3-PHENYL-1,2,4-THIADIAZOL-5-YL)-1,4-DIAZEPANE, CHLORIDE ION, ...
Authors:Wielens, J, Heady, S.J, Rhodes, D.I, Mulder, R.J, Dolezal, O, Deadman, J.J, Newman, J, Chalmers, D.K, Parker, M.W, Peat, T.S, Scanlon, M.J.
Deposit date:2012-02-06
Release date:2012-12-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Parallel Screening of Low Molecular Weight Fragment Libraries: Do Differences in Methodology Affect Hit Identification?
J.Biomol.Screen, 18, 2013
1T3P
DownloadVisualize
BU of 1t3p by Molmil
Half-sandwich arene ruthenium(II)-enzyme complex
Descriptor: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
Authors:McNae, I.W, Fishburne, K, Habtemariam, A, Hunter, T.M, Melchart, M, Wang, F, Walkinshaw, M.D, Sadler, P.J.
Deposit date:2004-04-27
Release date:2005-07-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Half-sandwich arene ruthenium(II)-enzyme complex
CHEM.COMMUN.(CAMB.), 16, 2004
4ADM
DownloadVisualize
BU of 4adm by Molmil
Crystal structure of Rv1098c in complex with meso-tartrate
Descriptor: FUMARATE HYDRATASE CLASS II, GLYCEROL, S,R MESO-TARTARIC ACID
Authors:Mechaly, A.E, Haouz, A, Miras, I, Weber, P, Shepard, W, Cole, S, Alzari, P.M, Bellinzoni, M.
Deposit date:2011-12-27
Release date:2012-04-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Conformational Changes Upon Ligand Binding in the Essential Class II Fumarase Rv1098C from Mycobacterium Tuberculosis.
FEBS Lett., 586, 2012
1K8Z
DownloadVisualize
BU of 1k8z by Molmil
CRYSTAL STRUCTURE OF THE TRYPTOPHAN SYNTHASE BETA-SER178PRO MUTANT COMPLEXED WITH N-[1H-INDOL-3-YL-ACETYL]GLYCINE ACID
Descriptor: N-[1H-INDOL-3-YL-ACETYL]GLYCINE ACID, PYRIDOXAL-5'-PHOSPHATE, SODIUM ION, ...
Authors:Weyand, M, Schlichting, I, Marabotti, A, Mozzarelli, A.
Deposit date:2001-10-26
Release date:2002-06-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the beta Ser178--> Pro mutant of tryptophan synthase. A "knock-out" allosteric enzyme.
J.Biol.Chem., 277, 2002
2QER
DownloadVisualize
BU of 2qer by Molmil
Crystal structure of Cryptosporidium parvum cyclophilin type peptidyl-prolyl cis-trans isomerase cgd2_1660 in the presence of dipeptide ala-pro
Descriptor: ALANINE, Cyclophilin-like protein, putative, ...
Authors:Wernimont, A.K, Lew, J, Hills, T, Hassanali, A, Lin, L, Wasney, G, Zhao, Y, Kozieradzki, I, Vedadi, M, Schapira, M, Bochkarev, A, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Sundstrom, M, Hui, R, Artz, J.D, Amani, M, Structural Genomics Consortium (SGC)
Deposit date:2007-06-26
Release date:2007-07-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Crystal structure of Cryptosporidium parvum cyclophilin type peptidyl-prolyl cis-trans isomerase cgd2_1660 in the presence of dipeptide ala-pro.
To be Published

226262

PDB entries from 2024-10-16

PDB statisticsPDBj update infoContact PDBjnumon