Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 17801 results

1RTY
DownloadVisualize
BU of 1rty by Molmil
Crystal Structure of Bacillus subtilis YvqK, a putative ATP-binding Cobalamin Adenosyltransferase, The North East Structural Genomics Target SR128
Descriptor: PHOSPHATE ION, yvqk protein
Authors:Forouhar, F, Lee, I, Xiao, R, Acton, T.B, Montelione, G.T, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2003-12-10
Release date:2003-12-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Functional insights from structural genomics.
J.STRUCT.FUNCT.GENOM., 8, 2007
3OJ4
DownloadVisualize
BU of 3oj4 by Molmil
Crystal structure of the A20 ZnF4, ubiquitin and UbcH5A complex
Descriptor: Tumor necrosis factor alpha-induced protein 3, Ubiquitin, Ubiquitin-conjugating enzyme E2 D1, ...
Authors:Bosanac, I, Hymowitz, S.G.
Deposit date:2010-08-20
Release date:2010-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Ubiquitin Binding to A20 ZnF4 Is Required for Modulation of NF-κB Signaling
Mol.Cell, 40, 2010
4JFR
DownloadVisualize
BU of 4jfr by Molmil
Crystal structure of anabolic ornithine carbamoyltransferase from Vibrio vulnificus in complex with carbamoyl phosphate
Descriptor: CHLORIDE ION, MAGNESIUM ION, Ornithine carbamoyltransferase, ...
Authors:Shabalin, I.G, Winsor, J, Grimshaw, S, Osinski, T, Bajor, J, Chordia, M.D, Shuvalova, L, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-02-28
Release date:2013-03-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Crystal structures and kinetic properties of anabolic ornithine carbamoyltransferase from human pathogens Vibrio vulnificus and Bacillus anthracis
to be published
1RUQ
DownloadVisualize
BU of 1ruq by Molmil
Crystal Structure (H) of u.v.-irradiated Diels-Alder antibody 13G5 Fab at pH 8.0 with a data set collected in house.
Descriptor: ZINC ION, immunoglobulin 13G5 heavy chain, immunoglobulin 13G5 light chain
Authors:Zhu, X, Wentworth Jr, P, Wentworth, A.D, Eschenmoser, A, Lerner, R.A, Wilson, I.A.
Deposit date:2003-12-11
Release date:2004-03-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Probing the antibody-catalyzed water-oxidation pathway at atomic resolution.
Proc.Natl.Acad.Sci.USA, 110, 2004
1Y7J
DownloadVisualize
BU of 1y7j by Molmil
NMR structure family of Human Agouti Signalling Protein (80-132: Q115Y, S124Y)
Descriptor: Agouti Signaling Protein
Authors:McNulty, J.C, Jackson, P.J, Thompson, D.A, Chai, B, Gantz, I, Barsh, G.S, Dawson, P.E, Millhauser, G.L.
Deposit date:2004-12-08
Release date:2005-02-15
Last modified:2021-10-20
Method:SOLUTION NMR
Cite:Structures of the agouti signaling protein.
J.Mol.Biol., 346, 2005
3ATP
DownloadVisualize
BU of 3atp by Molmil
Structure of the ligand binding domain of the bacterial serine chemoreceptor Tsr with ligand
Descriptor: Methyl-accepting chemotaxis protein I, SERINE
Authors:Tajima, H, Sakuma, M, Homma, K, Kawagishi, I, Imada, K.
Deposit date:2011-01-07
Release date:2011-10-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Ligand specificity determined by differentially arranged common ligand-binding residues in bacterial amino acid chemoreceptors Tsr and Tar.
J.Biol.Chem., 286, 2011
1RRD
DownloadVisualize
BU of 1rrd by Molmil
DNA/RNA HYBRID DUPLEX CONTAINING A PURINE-RICH RNA STRAND, NMR, 10 STRUCTURES
Descriptor: DNA (5'-D(*GP*CP*TP*TP*CP*TP*CP*TP*TP*C)-3'), RNA (5'-R(*GP*AP*AP*GP*AP*GP*AP*AP*GP*C)-3')
Authors:Gyi, J.I, Lane, A.N, Conn, G.L, Brown, T.
Deposit date:1997-10-21
Release date:1998-04-22
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structures of DNA.RNA hybrids with purine-rich and pyrimidine-rich strands: comparison with the homologous DNA and RNA duplexes.
Biochemistry, 37, 1998
1RRR
DownloadVisualize
BU of 1rrr by Molmil
RNA DUPLEX CONTAINING A PURINE-RICH STRAND, NMR, 10 STRUCTURES
Descriptor: RNA (5'-R(*GP*AP*AP*GP*AP*GP*AP*AP*GP*C)-3'), RNA (5'-R(*GP*CP*UP*UP*CP*UP*CP*UP*UP*C)-3')
Authors:Gyi, J.I, Lane, A.N, Conn, G.L, Brown, T.
Deposit date:1997-10-21
Release date:1998-04-22
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structures of DNA.RNA hybrids with purine-rich and pyrimidine-rich strands: comparison with the homologous DNA and RNA duplexes.
Biochemistry, 37, 1998
1RNK
DownloadVisualize
BU of 1rnk by Molmil
THE STRUCTURE OF AN RNA PSEUDOKNOT THAT CAUSES EFFICIENT FRAMESHIFTING IN MOUSE MAMMARY TUMOR VIRUS
Descriptor: RNA PSEUDOKNOT
Authors:Shen, L.X, Tinoco Junior, I.
Deposit date:1995-01-11
Release date:1995-02-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The structure of an RNA pseudoknot that causes efficient frameshifting in mouse mammary tumor virus.
J.Mol.Biol., 247, 1995
1ROD
DownloadVisualize
BU of 1rod by Molmil
CHIMERIC PROTEIN OF INTERLEUKIN 8 AND HUMAN MELANOMA GROWTH STIMULATING ACTIVITY PROTEIN, NMR
Descriptor: CHIMERIC PROTEIN OF INTERLEUKIN 8 AND HUMAN MELANOMA GROWTH STIMULATING ACTIVITY PROTEIN
Authors:Roesch, P, Sticht, H, Auer, M, Schmitt, B, Besemer, J, Horcher, M, Kirsch, T, Lindley, I.J.D.
Deposit date:1995-11-24
Release date:1996-06-10
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Structure and activity of a chimeric interleukin-8-melanoma-growth-stimulatory-activity protein.
Eur.J.Biochem., 235, 1996
3AUV
DownloadVisualize
BU of 3auv by Molmil
Predicting Amino Acid Preferences in the Complementarity Determining Regions of an Antibody-Antigen Recognition Interface
Descriptor: sc-dsFv derived from the G6-Fab
Authors:Yu, C.M, Peng, H.P, Chen, I.C, Lee, Y.C, Chen, J.B, Tsai, K.C, Chen, C.T, Chang, J.Y, Yang, E.W, Hsu, P.C, Jian, J.W, Hsu, H.J, Chang, H.J, Hsu, W.L, Huang, K.F, Ma, A.C, Yang, A.S.
Deposit date:2011-02-16
Release date:2012-02-22
Last modified:2012-04-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Rationalization and design of the complementarity determining region sequences in an antibody-antigen recognition interface
Plos One, 7, 2012
6BII
DownloadVisualize
BU of 6bii by Molmil
Crystal Structure of Pyrococcus yayanosii Glyoxylate Hydroxypyruvate Reductase in complex with NADP and malonate (re-refinement of 5AOW)
Descriptor: GLYCEROL, Glyoxylate reductase, MALONATE ION, ...
Authors:Lassalle, L, Shabalin, I.G, Girard, E, Minor, W.
Deposit date:2017-11-02
Release date:2018-01-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:New insights into the mechanism of substrates trafficking in Glyoxylate/Hydroxypyruvate reductases.
Sci Rep, 6, 2016
1RGS
DownloadVisualize
BU of 1rgs by Molmil
REGULATORY SUBUNIT OF CAMP DEPENDENT PROTEIN KINASE
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, CAMP DEPENDENT PROTEIN KINASE
Authors:Su, Y, Dostmann, W.R.G, Herberg, F.W, Durick, K, Xuong, N.-H, Ten Eyck, L, Taylor, S.S, Varughese, K.I.
Deposit date:1995-06-21
Release date:1996-12-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Regulatory subunit of protein kinase A: structure of deletion mutant with cAMP binding domains.
Science, 269, 1995
6MDQ
DownloadVisualize
BU of 6mdq by Molmil
Crystal structure of equine serum albumin in complex with testosterone
Descriptor: CITRATE ANION, Serum albumin, TESTOSTERONE
Authors:Czub, M.P, Majorek, K.A, Shabalin, I.G, Handing, K.B, Venkataramany, B.S, Cymborowski, M.T, Satchell, K.J, Joachimiak, A, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-09-05
Release date:2018-09-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Testosterone meets albumin - the molecular mechanism of sex hormone transport by serum albumins.
Chem Sci, 10, 2019
4LJC
DownloadVisualize
BU of 4ljc by Molmil
Structure of an X-ray-induced photobleached state of IrisFP
Descriptor: Green to red photoconvertible GPF-like protein EosFP, SULFATE ION, SULFITE ION
Authors:Duan, C, Adam, V, Byrdin, M, Ridard, J, Kieffer-Jacquinod, S, Morlot, C, Arcizet, D, Demachy, I, Bourgeois, D.
Deposit date:2013-07-04
Release date:2013-10-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structural evidence for a two-regime photobleaching mechanism in a reversibly switchable fluorescent protein.
J.Am.Chem.Soc., 135, 2013
7N3V
DownloadVisualize
BU of 7n3v by Molmil
Crystal structure of Mycobacterium smegmatis LmcA
Descriptor: GLYCEROL, LmcA, SULFATE ION
Authors:Patel, O, Lucet, I, Panjikar, S.
Deposit date:2021-06-02
Release date:2022-04-13
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal structure of the putative cell-wall lipoglycan biosynthesis protein LmcA from Mycobacterium smegmatis.
Acta Crystallogr D Struct Biol, 78, 2022
3GDP
DownloadVisualize
BU of 3gdp by Molmil
Hydroxynitrile lyase from almond, monoclinic crystal form
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Dreveny, I, Gruber, K, Kratky, C.
Deposit date:2009-02-24
Release date:2009-03-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Substrate binding in the FAD-dependent hydroxynitrile lyase from almond provides insight into the mechanism of cyanohydrin formation and explains the absence of dehydrogenation activity.
Biochemistry, 48, 2009
3GAR
DownloadVisualize
BU of 3gar by Molmil
A PH-DEPENDENT STABLIZATION OF AN ACTIVE SITE LOOP OBSERVED FROM LOW AND HIGH PH CRYSTAL STRUCTURES OF MUTANT MONOMERIC GLYCINAMIDE RIBONUCLEOTIDE TRANSFORMYLASE
Descriptor: GLYCINAMIDE RIBONUCLEOTIDE TRANSFORMYLASE, PHOSPHATE ION
Authors:Su, Y, Yamashita, M.M, Greasley, S.E, Mullen, C.A, Shim, J.H, Jennings, P.A, Benkovic, S.J, Wilson, I.A.
Deposit date:1998-05-13
Release date:1998-08-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A pH-dependent stabilization of an active site loop observed from low and high pH crystal structures of mutant monomeric glycinamide ribonucleotide transformylase at 1.8 to 1.9 A.
J.Mol.Biol., 281, 1998
3GF1
DownloadVisualize
BU of 3gf1 by Molmil
SOLUTION STRUCTURE OF HUMAN INSULIN-LIKE GROWTH FACTOR 1: A NUCLEAR MAGNETIC RESONANCE AND RESTRAINED MOLECULAR DYNAMICS STUDY
Descriptor: INSULIN-LIKE GROWTH FACTOR I
Authors:Cooke, R.M, Harvey, T.S, Campbell, I.D.
Deposit date:1991-01-24
Release date:1993-04-15
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Solution structure of human insulin-like growth factor 1: a nuclear magnetic resonance and restrained molecular dynamics study.
Biochemistry, 30, 1991
3GJR
DownloadVisualize
BU of 3gjr by Molmil
Caspase-3 Binds Diverse P4 Residues in Peptides
Descriptor: Caspase-3 subunit p12, Caspase-3 subunit p17, GLYCEROL, ...
Authors:Fang, B, Fu, G, Agniswamy, J, Harrison, R.W, Weber, I.T.
Deposit date:2009-03-09
Release date:2009-03-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Caspase-3 binds diverse P4 residues in peptides as revealed by crystallography and structural modeling.
Apoptosis, 14, 2009
3GJT
DownloadVisualize
BU of 3gjt by Molmil
Caspase-3 Binds Diverse P4 Residues in Peptides
Descriptor: Caspase-3 subunit p12, Caspase-3 subunit p17, peptide inhibitor
Authors:Fang, B, Fu, G, Agniswamy, J, Harrison, R.W, Weber, I.T.
Deposit date:2009-03-09
Release date:2009-03-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Caspase-3 binds diverse P4 residues in peptides as revealed by crystallography and structural modeling.
Apoptosis, 14, 2009
3AJ1
DownloadVisualize
BU of 3aj1 by Molmil
The structure of AxCeSD octamer (N-terminal HIS-tag) from Acetobacter xylinum
Descriptor: Cellulose synthase operon protein D
Authors:Hu, S.Q, Tajima, K, Zhou, Y, Tanaka, I, Yao, M.
Deposit date:2010-05-20
Release date:2010-10-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of bacterial cellulose synthase subunit D octamer with four inner passageways
Proc.Natl.Acad.Sci.USA, 107, 2010
6MCO
DownloadVisualize
BU of 6mco by Molmil
Crystal structure of the B41 SOSIP.664 Env trimer with PGT124 and 35O22 Fabs, in P23 space group
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 35O22 Fab heavy chain, ...
Authors:Kumar, S, Sarkar, A, Wilson, I.A.
Deposit date:2018-08-31
Release date:2019-02-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.526 Å)
Cite:Capturing the inherent structural dynamics of the HIV-1 envelope glycoprotein fusion peptide.
Nat Commun, 10, 2019
7N91
DownloadVisualize
BU of 7n91 by Molmil
P70 S6K1 IN COMPLEX WITH MSC2317067A-1
Descriptor: 4-{[(1S)-1-(3-fluorophenyl)-2-(methylamino)ethyl]amino}quinazoline-8-carboxamide, Ribosomal protein S6 kinase beta-1
Authors:Mochalkin, I.
Deposit date:2021-06-16
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:Identification of Clinical Candidate M2698, a Dual p70S6K and Akt Inhibitor, for Treatment of PAM Pathway-Altered Cancers.
J.Med.Chem., 64, 2021
7N93
DownloadVisualize
BU of 7n93 by Molmil
P70 S6K1 IN COMPLEX WITH MSC2363318A-1
Descriptor: 4-({(1S)-2-(azetidin-1-yl)-1-[4-chloro-3-(trifluoromethyl)phenyl]ethyl}amino)quinazoline-8-carboxamide, Ribosomal protein S6 kinase beta-1
Authors:Mochalkin, I.
Deposit date:2021-06-16
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Identification of Clinical Candidate M2698, a Dual p70S6K and Akt Inhibitor, for Treatment of PAM Pathway-Altered Cancers.
J.Med.Chem., 64, 2021

223532

數據於2024-08-07公開中

PDB statisticsPDBj update infoContact PDBjnumon