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PDB: 17965 results

8GBB
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Short-chain dehydrogenase/reductase (SDR) from multi-drug resistant Acinetobacter baumannii
Descriptor: SDR family oxidoreductase
Authors:Shaw, K.I, Ghafoori, S.M, Forwood, J.K.
Deposit date:2023-02-24
Release date:2023-05-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystallographic structure determination and analysis of a potential short-chain dehydrogenase/reductase (SDR) from multi-drug resistant Acinetobacter baumannii.
Plos One, 18, 2023
3ZFB
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BU of 3zfb by Molmil
Crystal structure of the I75A mutant of human class alpha glutathione transferase in the apo form
Descriptor: GLUTATHIONE S-TRANSFERASE A1
Authors:Parbhoo, N, Fanucchi, S, Achilonu, I.A, Fernandes, M.A, Gildenhuys, S, Dirr, H.W.
Deposit date:2012-12-11
Release date:2012-12-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal Structure of the I75A Mutant of Human Class Alpha Glutathione Transferase in the Apo Form
To be Published
4HF5
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BU of 4hf5 by Molmil
Crystal structure of Fab 8F8 in complex a H2N2 influenza virus hemagglutinin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab 8F8 heavy chain, Fab 8F8 light chain, ...
Authors:Xu, R, Wilson, I.A.
Deposit date:2012-10-04
Release date:2013-02-13
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.004 Å)
Cite:A recurring motif for antibody recognition of the receptor-binding site of influenza hemagglutinin.
Nat.Struct.Mol.Biol., 20, 2013
3RZS
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Apis mellifera OBP14 in complex with Ta6Br14
Descriptor: HEXATANTALUM DODECABROMIDE, OBP14
Authors:Spinelli, S, Lagarde, A, Iovinella, I, Tegoni, M, Pelosi, P, Cambillau, C.
Deposit date:2011-05-12
Release date:2011-11-30
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal structure of Apis mellifera OBP14, a C-minus odorant-binding protein, and its complexes with odorant molecules.
Insect Biochem.Mol.Biol., 42, 2012
4GSP
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BU of 4gsp by Molmil
RIBONUCLEASE T1 COMPLEXED WITH 2',3'-CGPS + 3'-GMP, 7 DAYS
Descriptor: CALCIUM ION, GUANOSINE-2',3'-CYCLOPHOSPHOROTHIOATE, GUANOSINE-3'-MONOPHOSPHATE, ...
Authors:Zegers, I, Wyns, L.
Deposit date:1997-12-02
Release date:1998-08-12
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Hydrolysis of a slow cyclic thiophosphate substrate of RNase T1 analyzed by time-resolved crystallography.
Nat.Struct.Biol., 5, 1998
3X0O
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ADP ribose pyrophosphatase from Thermus thermophilus HB8 in ESMM-state at reaction time of 10 min
Descriptor: ADP-ribose pyrophosphatase, GLYCEROL, MANGANESE (II) ION, ...
Authors:Furuike, Y, Akita, Y, Miyahara, I, Kamiya, N.
Deposit date:2014-10-17
Release date:2016-04-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:ADP-Ribose Pyrophosphatase Reaction in Crystalline State Conducted by Consecutive Binding of Two Manganese(II) Ions as Cofactors
Biochemistry, 55, 2016
3S8R
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BU of 3s8r by Molmil
Crystal Structures of Glutaryl 7-Aminocephalosporanic Acid Acylase: Insight into Autoproteolytic Activation
Descriptor: GLYCEROL, Glutaryl-7-aminocephalosporanic-acid acylase
Authors:Kim, J.K, Yang, I.S, Park, S.S, Kim, K.H.
Deposit date:2011-05-30
Release date:2011-07-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of glutaryl 7-aminocephalosporanic acid acylase: insight into autoproteolytic activation.
Biochemistry, 42, 2003
3ZL1
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A thiazolyl-mannoside bound to FimH, monoclinic space group
Descriptor: CHLORIDE ION, N-{5-[(1R)-1-hydroxyethyl]-1,3-thiazol-2-yl}-alpha-D-mannopyranosylamine, PROTEIN FIMH
Authors:Brument, S, Sivignon, A, Dumych, T.I, Moreau, N, Roos, G, Guerardel, Y, Chalopin, T, Deniaud, D, Bilyy, R.O, Darfeuille-Michaud, A, Bouckaert, J, Gouin, S.G.
Deposit date:2013-01-27
Release date:2013-07-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.551 Å)
Cite:Thiazolylaminomannosides as Potent Antiadhesives of Type 1 Piliated Escherichia Coli Isolated from Crohn'S Disease Patients.
J.Med.Chem., 56, 2013
3ZL2
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A thiazolyl-mannoside bound to FimH, orthorhombic space group
Descriptor: N-{5-[(1R)-1-hydroxyethyl]-1,3-thiazol-2-yl}-alpha-D-mannopyranosylamine, PROTEIN FIMH
Authors:Brument, S, Sivignon, A, Dumych, T.I, Moreau, N, Roos, G, Guerardel, Y, Chalopin, T, Deniaud, D, Bilyy, R.O, Darfeuille-Michaud, A, Bouckaert, J, Gouin, S.G.
Deposit date:2013-01-27
Release date:2013-07-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.251 Å)
Cite:Thiazolylaminomannosides as Potent Antiadhesives of Type 1 Piliated Escherichia Coli Isolated from Crohn'S Disease Patients.
J.Med.Chem., 56, 2013
4IR4
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BU of 4ir4 by Molmil
Crystal Structure of the bromodomain of human BAZ2B in complex with 1-[7-(morpholin-4-yl)-1-(pyridin-2-yl)indolizin-3-yl]ethanone (GSK2834113A)
Descriptor: 1,2-ETHANEDIOL, 1-[7-(morpholin-4-yl)-1-(pyridin-2-yl)indolizin-3-yl]ethanone, Bromodomain adjacent to zinc finger domain protein 2B
Authors:Chaikuad, A, Felletar, I, Chung, C.W, Drewry, D, Chen, P, Filippakopoulos, P, Fedorov, O, Krojer, T, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2013-01-14
Release date:2013-01-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Discovery and Characterization of GSK2801, a Selective Chemical Probe for the Bromodomains BAZ2A and BAZ2B.
J.Med.Chem., 59, 2016
4IR5
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Crystal Structure of the bromodomain of human BAZ2B in complex with 1-{1-[2-(hydroxymethyl)phenyl]-7-phenoxyindolizin-3-yl}ethanone (GSK2847449A)
Descriptor: 1,2-ETHANEDIOL, 1-{1-[2-(hydroxymethyl)phenyl]-7-phenoxyindolizin-3-yl}ethanone, Bromodomain adjacent to zinc finger domain protein 2B
Authors:Chaikuad, A, Felletar, I, Chung, C.W, Drewry, D, Chen, P, Filippakopoulos, P, Fedorov, O, Krojer, T, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2013-01-14
Release date:2013-01-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Discovery and Characterization of GSK2801, a Selective Chemical Probe for the Bromodomains BAZ2A and BAZ2B.
J.Med.Chem., 59, 2016
3S91
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Crystal Structure of the first bromodomain of human BRD3 in complex with the inhibitor JQ1
Descriptor: (6S)-6-(2-tert-butoxy-2-oxoethyl)-4-(4-chlorophenyl)-2,3,9-trimethyl-6,7-dihydrothieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-10-ium, Bromodomain-containing protein 3, ISOPROPYL ALCOHOL
Authors:Filippakopoulos, P, Picaud, S, Qi, J, Keates, T, Felletar, I, Fedorov, O, Muniz, J, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Bradner, J.E, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2011-05-31
Release date:2011-06-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Crystal Structure of the first bromodomain of human BRD3 in complex with the inhibitor JQ1
To be Published
4IR6
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Crystal Structure of the bromodomain of human BAZ2B in complex with 1-{1-[2-(METHYLSULFONYL)PHENYL]-7-PHENOXYINDOLIZIN-3-YL}ETHANONE (GSK2838097A)
Descriptor: 1,2-ETHANEDIOL, 1-{1-[2-(methylsulfonyl)phenyl]-7-phenoxyindolizin-3-yl}ethanone, Bromodomain adjacent to zinc finger domain protein 2B
Authors:Chaikuad, A, Felletar, I, Chung, C.W, Drewry, D, Chen, P, Filippakopoulos, P, Fedorov, O, Krojer, T, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2013-01-14
Release date:2013-01-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Discovery and Characterization of GSK2801, a Selective Chemical Probe for the Bromodomains BAZ2A and BAZ2B.
J.Med.Chem., 59, 2016
3ZLC
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BU of 3zlc by Molmil
Crystal Structure of Erv41p
Descriptor: ER-DERIVED VESICLES PROTEIN ERV41
Authors:Biterova, E.I, Svard, M, Possner, D.D.D, Guy, J.E.
Deposit date:2013-01-30
Release date:2013-03-27
Last modified:2013-06-12
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:The Crystal Structure of the Lumenal Domain of Erv41P, a Protein Involved in Transport between the Endoplasmic Reticulum and Golgi Apparatus
J.Mol.Biol., 425, 2013
3X0S
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BU of 3x0s by Molmil
ADP ribose pyrophosphatase from Thermus thermophilus HB8 in E'-state at reaction time of 50 min
Descriptor: ADP-ribose pyrophosphatase, GLYCEROL, MANGANESE (II) ION, ...
Authors:Furuike, Y, Akita, Y, Miyahara, I, Kamiya, N.
Deposit date:2014-10-17
Release date:2016-04-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:ADP-Ribose Pyrophosphatase Reaction in Crystalline State Conducted by Consecutive Binding of Two Manganese(II) Ions as Cofactors
Biochemistry, 55, 2016
3ZM5
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BU of 3zm5 by Molmil
CRYSTAL STRUCTURE OF MURF LIGASE IN COMPLEX WITH CYANOTHIOPHENE INHIBITOR
Descriptor: 2,4-bis(chloranyl)-N-[3-cyano-6-[(4-hydroxyphenyl)methyl]-5,7-dihydro-4H-thieno[2,3-c]pyridin-2-yl]-5-morpholin-4-ylsulfonyl-benzamide, UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE
Authors:Hrast, M, Turk, S, Sosic, I, Knez, D, Randall, C.P, Barreteau, H, Contreras-Martel, C, Dessen, A, ONeill, A.J, Mengin-Lecreulx, D, Blanot, D, Gobec, S.
Deposit date:2013-02-05
Release date:2013-07-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:Structure-Activity Relationships of New Cyanothiophene Inhibitors of the Essential Peptidoglycan Biosynthesis Enzyme Murf.
Eur.J.Med.Chem., 66C, 2013
3SJZ
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The structure of aIF2gamma subunit delta 41-45 from archaeon Sulfolobus solfataricus complexed with GDP and GDPNP
Descriptor: BETA-MERCAPTOETHANOL, GUANOSINE-5'-DIPHOSPHATE, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Arkhipova, V.I, Lazopulo, S.M, Lazopulo, A.M, Nikonov, O.S, Stolboushkina, E.A, Gabdoulkhakov, A.G, Garber, M.B, Nikonov, S.V.
Deposit date:2011-06-22
Release date:2012-07-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:HOLD FOR PUBLICATION
To be Published
4J4E
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BU of 4j4e by Molmil
Structure of P51G Cyanovirin-N swapped trimer in the P212121 space group
Descriptor: Cyanovirin-N
Authors:Koharudin, L.M.I, Liu, L, Gronenborn, A.M.
Deposit date:2013-02-06
Release date:2013-04-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Different 3D domain-swapped oligomeric cyanovirin-N structures suggest trapped folding intermediates.
Proc.Natl.Acad.Sci.USA, 110, 2013
3ZET
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BU of 3zet by Molmil
Structure of a Salmonella typhimurium YgjD-YeaZ heterodimer.
Descriptor: ADENOSINE MONOPHOSPHATE, CADMIUM ION, PROBABLE TRNA THREONYLCARBAMOYLADENOSINE BIOSYNTHESIS PROTEIN GCP, ...
Authors:Nichols, C.E, Lamb, H.K, Thompson, P, El Omari, K, Lockyer, M, Charles, I, Hawkins, A.R, Stammers, D.K.
Deposit date:2012-12-07
Release date:2013-03-20
Last modified:2013-05-08
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystal Structure of the Dimer of Two Essential Salmonella Typhimurium Proteins, Ygjd & Yeaz and Calorimetric Evidence for the Formation of a Ternary Ygjd-Yeaz-Yjee Complex.
Protein Sci., 22, 2013
3SM8
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BU of 3sm8 by Molmil
Crystal Structure of Pseudomonas aeruginosa D-Arginine Dehydrogenase in Complex with an (N5) Flavin Adduct
Descriptor: FAD-dependent catabolic D-arginine dehydrogenase, DauA, GLYCEROL, ...
Authors:Fu, G, Weber, I.T.
Deposit date:2011-06-27
Release date:2011-07-20
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:Atomic-resolution structure of an N5 flavin adduct in D-arginine dehydrogenase.
Biochemistry, 50, 2011
3ZG3
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BU of 3zg3 by Molmil
STEROL 14-ALPHA DEMETHYLASE (CYP51)FROM TRYPANOSOMA CRUZI IN COMPLEX WITH THE PYRIDINE INHIBITOR N-(1-(5-(trifluoromethyl)(pyridin-2-yl)) piperidin-4yl)-N-(4-(trifluoromethyl)phenyl)pyridin-3-amine (EPL- BS967, UDD)
Descriptor: N-[4-(trifluoromethyl)phenyl]-N-[1-[5-(trifluoromethyl)pyridin-2-yl]piperidin-4-yl]pyridin-3-amine, PROTOPORPHYRIN IX CONTAINING FE, STEROL 14-ALPHA DEMETHYLASE
Authors:Hargrove, T.Y, Wawrzak, Z, Keenan, M, Chatelain, E, Lepesheva, G.I.
Deposit date:2012-12-14
Release date:2013-09-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Complexes of Trypanosoma Cruzi Sterol 14Alpha-Demethylase (Cyp51) with Two Pyridine-Based Drug Candidates for Chagas Disease: Structural Basis for Pathogen-Selectivity
J.Biol.Chem., 288, 2013
3S92
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Crystal Structure of the second bromodomain of human BRD3 in complex with the inhibitor JQ1
Descriptor: (6S)-6-(2-tert-butoxy-2-oxoethyl)-4-(4-chlorophenyl)-2,3,9-trimethyl-6,7-dihydrothieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-10-ium, 1,2-ETHANEDIOL, Bromodomain-containing protein 3
Authors:Filippakopoulos, P, Picaud, S, Qi, J, Keates, T, Felletar, I, Fedorov, O, Muniz, J, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Bountra, C, Bradner, J.E, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2011-05-31
Release date:2011-06-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Crystal Structure of the second bromodomain of human BRD3 in complex with the inhibitor JQ1
To be Published
3ZZG
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BU of 3zzg by Molmil
Crystal structure of the amino acid kinase domain from Saccharomyces cerevisiae acetylglutamate kinase without ligands
Descriptor: ACETYLGLUTAMATE KINASE
Authors:de Cima, S, Gil-Ortiz, F, Crabeel, M, Fita, I, Rubio, V.
Deposit date:2011-09-01
Release date:2012-05-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Insight on an Arginine Synthesis Metabolon from the Tetrameric Structure of Yeast Acetylglutamate Kinase
Plos One, 7, 2012
4H3Q
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BU of 4h3q by Molmil
Crystal structure of human ERK2 complexed with a MAPK docking peptide
Descriptor: Dual specificity mitogen-activated protein kinase kinase 2, Mitogen-activated protein kinase 1, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Gogl, G, Toeroe, I, Remenyi, A.
Deposit date:2012-09-14
Release date:2013-02-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Protein-peptide complex crystallization: a case study on the ERK2 mitogen-activated protein kinase
Acta Crystallogr.,Sect.D, 69, 2013
4H4D
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BU of 4h4d by Molmil
IspH in complex with (E)-4-amino-3-methylbut-2-enyl diphosphate
Descriptor: (2E)-4-amino-3-methylbut-2-en-1-yl trihydrogen diphosphate, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, IRON/SULFUR CLUSTER
Authors:Span, I, Eisenreich, W, Jauch, J, Bacher, A, Groll, M.
Deposit date:2012-09-17
Release date:2013-01-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structures of Fluoro, Amino, and Thiol Inhibitors Bound to the [Fe(4) S(4) ] Protein IspH.
Angew.Chem.Int.Ed.Engl., 52, 2013

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