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PDB: 17892 results

4POO
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BU of 4poo by Molmil
The crystal structure of Bacillus subtilis YtqB in complex with SAM
Descriptor: Putative RNA methylase, S-ADENOSYLMETHIONINE
Authors:Park, S.C, Song, W.S, Yoon, S.I.
Deposit date:2014-02-26
Release date:2014-04-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural analysis of a putative SAM-dependent methyltransferase, YtqB, from Bacillus subtilis
Biochem.Biophys.Res.Commun., 446, 2014
1N83
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BU of 1n83 by Molmil
Crystal Structure of the complex between the Orphan Nuclear Hormone Receptor ROR(alpha)-LBD and Cholesterol
Descriptor: CHOLESTEROL, Nuclear receptor ROR-alpha
Authors:Kallen, J.A, Schlaeppi, J.M, Bitsch, F, Geisse, S, Geiser, M, Delhon, I, Fournier, B.
Deposit date:2002-11-19
Release date:2002-12-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:X-ray Structure of hROR(alpha) LBD at 1.63A: Structural and Functional data that Cholesterol or a Cholesterol derivative is the natural ligand of ROR(alpha)
Structure, 10, 2002
2BXA
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BU of 2bxa by Molmil
Human serum albumin complexed with 3-carboxy-4-methyl-5-propyl-2- furanpropanoic acid (CMPF)
Descriptor: 3-CARBOXY-4-METHYL-5-PROPYL-2-FURANPROPIONIC, SERUM ALBUMIN
Authors:Ghuman, J, Zunszain, P.A, Petitpas, I, Bhattacharya, A.A, Otagiri, M, Curry, S.
Deposit date:2005-07-26
Release date:2005-09-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural Basis of the Drug-Binding Specificity of Human Serum Albumin.
J.Mol.Biol., 353, 2005
1N8M
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BU of 1n8m by Molmil
Solution structure of Pi4, a four disulfide bridged scorpion toxin active on potassium channels
Descriptor: Potassium channel blocking toxin 4
Authors:Guijarro, J.I, M'Barek, S, Olamendi-Portugal, T, Gomez-Lagunas, F, Garnier, D, Rochat, H, Possani, L.D, Sabatier, J.M, Delepierre, M.
Deposit date:2002-11-21
Release date:2003-09-02
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of Pi4, a short four-disulfide-bridged scorpion toxin specific of potassium channels.
Protein Sci., 12, 2003
1N81
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BU of 1n81 by Molmil
Crystal structure of Pfg27 from Plasmodium falciparum
Descriptor: plasmodium falciparum gamete antigen 27/25
Authors:Sharma, A, Sharma, I, Kogkasuriyachai, D, Kumar, N.
Deposit date:2002-11-19
Release date:2003-03-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of a gametocyte protein essential for sexual development in Plasmodium falciparum
Nat.Struct.Biol., 10, 2003
6RMK
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BU of 6rmk by Molmil
Bacteriorhodopsin, dark state, cell 2, refined using the same protocol as sub-ps time delays
Descriptor: Bacteriorhodopsin, RETINAL
Authors:Nass Kovacs, G, Colletier, J.-P, Gruenbein, M.L, Stensitzki, T, Batyuk, A, Carbajo, S, Doak, R.B, Ehrenberg, D, Foucar, L, Gasper, R, Gorel, A, Hilpert, M, Kloos, M, Koglin, J, Reinstein, J, Roome, C.M, Schlesinger, R, Seaberg, M, Shoeman, R.L, Stricker, M, Boutet, S, Haacke, S, Heberle, J, Domratcheva, T, Barends, T.R.M, Schlichting, I.
Deposit date:2019-05-07
Release date:2019-06-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Three-dimensional view of ultrafast dynamics in photoexcited bacteriorhodopsin.
Nat Commun, 10, 2019
6RQG
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BU of 6rqg by Molmil
P46, an immunodominant surface protein from Mycoplasma hyopneumoniae
Descriptor: 46 kDa surface antigen, SODIUM ION
Authors:Guasch, A, Fita, I.
Deposit date:2019-05-15
Release date:2019-11-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of P46, an immunodominant surface 58 protein from Mycoplasma hyopneumoniae:interaction with a monoclonal antibody
Acta Crys Section D, D76, 2020
6C68
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BU of 6c68 by Molmil
MHC-independent t cell receptor A11
Descriptor: T-cell receptor alpha chain, T-cell receptor beta chain
Authors:Lu, J, Van Laethem, F, Saba, I, Chu, J, Bhattacharya, A, Love, N.C, Tikhonova, A, Radaev, S, Sun, X, Ko, A, Arnon, T, Shifrut, E, Friedman, N, Weng, N, Singer, A, Sun, P.D.
Deposit date:2018-01-18
Release date:2019-01-30
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Structure of MHC-Independent TCRs and Their Recognition of Native Antigen CD155.
J Immunol., 204, 2020
4ZPX
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BU of 4zpx by Molmil
Crystal structure of Lon ATPase domain from Thermococcus onnurineus NA1
Descriptor: ATP-dependent protease Lon, GLYCEROL
Authors:An, Y.J, Kim, M.I, Na, J.H, Cha, S.S.
Deposit date:2015-05-08
Release date:2016-05-11
Last modified:2020-02-19
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural disparity classifies AAA+ modules of Lon proteases into two distinct clades
To Be Published
6C8X
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BU of 6c8x by Molmil
Wild-type HIV-1 protease in complex with a phenylboronic acid (P2') analog of darunavir
Descriptor: CHLORIDE ION, GLYCEROL, Protease, ...
Authors:Windsor, I.W, Raines, R.T, Forest, K.T.
Deposit date:2018-01-25
Release date:2018-12-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.613 Å)
Cite:Sub-picomolar Inhibition of HIV-1 Protease with a Boronic Acid.
J. Am. Chem. Soc., 140, 2018
4YZJ
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BU of 4yzj by Molmil
Crystal structure of selnomethionin-labeled indole prenyltransferase TleC
Descriptor: Tryptophan dimethylallyltransferase
Authors:Mori, T, Matsui, T, Morita, H, Abe, I.
Deposit date:2015-03-25
Release date:2016-03-16
Last modified:2020-02-05
Method:X-RAY DIFFRACTION (2.106 Å)
Cite:Manipulation of prenylation reactions by structure-based engineering of bacterial indolactam prenyltransferases.
Nat Commun, 7, 2016
1N9O
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BU of 1n9o by Molmil
Crystal structure of the Phot-LOV1 domain from Chlamydomonas reinhardtii in illuminated state. Composite data set.
Descriptor: FLAVIN MONONUCLEOTIDE, SULFATE ION, putative blue light receptor
Authors:Fedorov, R, Schlichting, I, Hartmann, E, Domratcheva, T, Fuhrmann, M, Hegemann, P.
Deposit date:2002-11-25
Release date:2003-06-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structures and molecular mechanism of a light-induced signaling switch: The Phot-LOV1 domain from Chlamydomonas reinhardtii.
Biophys.J., 84, 2003
6SUB
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BU of 6sub by Molmil
Human PTPRU D1 domain, reduced form
Descriptor: CHLORIDE ION, Receptor-type tyrosine-protein phosphatase U
Authors:Hay, I.M, Fearnley, G.W, Sharpe, H.J, Deane, J.E.
Deposit date:2019-09-13
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:The receptor PTPRU is a redox sensitive pseudophosphatase.
Nat Commun, 11, 2020
6N4O
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BU of 6n4o by Molmil
Human Argonaute2-miR-122 bound to a seed and supplementary paired target
Descriptor: Protein argonaute-2, RNA (5'-R(*CP*CP*AP*UP*UP*GP*UP*CP*AP*CP*AP*CP*UP*CP*CP*AP*AP*A)-3'), RNA (5'-R(P*UP*GP*GP*AP*GP*UP*GP*UP*GP*AP*CP*AP*AP*UP*GP*GP*UP*GP*UP*UP*U)-3')
Authors:Sheu-Gruttadauria, J, MacRae, I.J.
Deposit date:2018-11-19
Release date:2019-05-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.899 Å)
Cite:Beyond the seed: structural basis for supplementary microRNA targeting by human Argonaute2.
Embo J., 38, 2019
1NMR
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BU of 1nmr by Molmil
Solution Structure of C-terminal Domain from Trypanosoma cruzi Poly(A)-Binding Protein
Descriptor: poly(A)-binding protein
Authors:Siddiqui, N, Kozlov, G, D'Orso, I, Trempe, J.F, Frasch, A.C.C, Gehring, K.
Deposit date:2003-01-10
Release date:2003-09-09
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure of the C-terminal Domain from poly(A)-binding protein in Trypanosoma cruzi: A vegetal PABC domain
Protein Sci., 12, 2003
2AEF
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BU of 2aef by Molmil
Crystal Structures of the MthK RCK Domain in Ca2+ bound form
Descriptor: CALCIUM ION, Calcium-gated potassium channel mthK
Authors:Dong, J, Shi, N, Berke, I, Chen, L, Jiang, Y.
Deposit date:2005-07-22
Release date:2005-10-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures of the MthK RCK Domain and the Effect of Ca2+ on Gating Ring Stability
J.Biol.Chem., 280, 2005
6SUC
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BU of 6suc by Molmil
Human PTPRU D1 domain, oxidised form
Descriptor: Receptor-type tyrosine-protein phosphatase U
Authors:Hay, I.M, Fearnley, G.W, Sharpe, H.J, Deane, J.E.
Deposit date:2019-09-13
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:The receptor PTPRU is a redox sensitive pseudophosphatase.
Nat Commun, 11, 2020
6SUH
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BU of 6suh by Molmil
Crystal structure of human transthyretin in complex with 3-O-methyltolcapone, a tolcapone analogue
Descriptor: 3-O-methyltolcapone, Transthyretin
Authors:Loconte, V, Cianci, M, Menozzi, I, Sbravati, D, Sansone, F, Casnati, A, Berni, R.
Deposit date:2019-09-14
Release date:2020-08-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Interactions of tolcapone analogues as stabilizers of the amyloidogenic protein transthyretin.
Bioorg.Chem., 103, 2020
210L
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BU of 210l by Molmil
PROTEIN STRUCTURE PLASTICITY EXEMPLIFIED BY INSERTION AND DELETION MUTANTS IN T4 LYSOZYME
Descriptor: 2-HYDROXYETHYL DISULFIDE, T4 LYSOZYME
Authors:Vetter, I.R, Baase, W.A, Heinz, D.W, Xiong, J.-P, Snow, S, Matthews, B.W.
Deposit date:1996-09-23
Release date:1996-12-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Protein structural plasticity exemplified by insertion and deletion mutants in T4 lysozyme.
Protein Sci., 5, 1996
6SVI
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BU of 6svi by Molmil
Non-terahertz irradiated structure of bovine trypsin (even frames of crystal x42)
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Ahlberg Gagner, V, Lundholm, I, Garcia-Bonete, M.J, Rodilla, H, Friedman, R, Zhaunerchyk, V, Bourenkov, G, Schneider, T, Stake, J, Katona, G.
Deposit date:2019-09-18
Release date:2020-01-22
Last modified:2020-01-29
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Clustering of atomic displacement parameters in bovine trypsin reveals a distributed lattice of atoms with shared chemical properties.
Sci Rep, 9, 2019
1NW7
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BU of 1nw7 by Molmil
Structure of the beta class N6-adenine DNA methyltransferase RsrI bound to S-ADENOSYL-L-HOMOCYSTEINE
Descriptor: CHLORIDE ION, MODIFICATION METHYLASE RSRI, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Thomas, C.B, Scavetta, R.D, Gumport, R.I, Churchill, M.E.A.
Deposit date:2003-02-05
Release date:2003-07-29
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of liganded and unliganded RsrI N6-adenine DNA methyltransferase: a distinct orientation for active cofactor binding
J.Biol.Chem., 278, 2003
6SVX
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BU of 6svx by Molmil
Reference structure of bovine trypsin (odd frames of crystal x33)
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Ahlberg Gagner, V, Lundholm, I, Garcia-Bonete, M.J, Rodilla, H, Friedman, R, Zhaunerchyk, V, Bourenkov, G, Schneider, T, Stake, J, Katona, G.
Deposit date:2019-09-19
Release date:2020-01-22
Last modified:2020-01-29
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Clustering of atomic displacement parameters in bovine trypsin reveals a distributed lattice of atoms with shared chemical properties.
Sci Rep, 9, 2019
6C9W
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BU of 6c9w by Molmil
Crystal Structure of a ligand bound LacY/Nanobody Complex
Descriptor: 4-nitrophenyl alpha-D-galactopyranoside, Lactose permease, Nanobody9047, ...
Authors:Kumar, H, Finer-Moore, J.S, Jiang, X, Smirnova, I, Kasho, V, Pardon, E, Steyaert, J, Kaback, H.R, Stroud, R.M.
Deposit date:2018-01-29
Release date:2018-08-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structure of a ligand-bound LacY-Nanobody Complex.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6CA7
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BU of 6ca7 by Molmil
Crystal structure of PCT64_13C, a strain specific anti-HIV antibody
Descriptor: PCT64_13C heavy chain, PCT64_13C light chain
Authors:Murrell, S, Wilson, I.A.
Deposit date:2018-01-29
Release date:2018-06-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.643 Å)
Cite:Co-evolution of HIV Envelope and Apex-Targeting Neutralizing Antibody Lineage Provides Benchmarks for Vaccine Design.
Cell Rep, 23, 2018
3ROH
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BU of 3roh by Molmil
Crystal Structure of Leukotoxin (LukE) from Staphylococcus aureus subsp. aureus COL.
Descriptor: CHLORIDE ION, Leucotoxin LukEv, TRIETHYLENE GLYCOL
Authors:Minasov, G, Halavaty, A, Shuvalova, L, Dubrovska, I, Winsor, J, Bagnoli, F, Falugi, F, Bottomley, M, Grandi, G, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-04-25
Release date:2011-05-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structures of the components of the Staphylococcus aureus leukotoxin ED.
Acta Crystallogr.,Sect.D, 72, 2016

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