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PDB: 17822 results

2WBL
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BU of 2wbl by Molmil
Three-dimensional structure of a binary ROP-PRONE complex
Descriptor: RAC-LIKE GTP-BINDING PROTEIN ARAC2, RHO OF PLANTS GUANINE NUCLEOTIDE EXCHANGE FACTOR 8
Authors:Thomas, C, Fricke, I, Weyand, M, Berken, A.
Deposit date:2009-03-02
Release date:2009-04-14
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:3D Structure of a Binary Rop-Prone Complex: The Final Intermediate for a Complete Set of Molecular Snapshots of the Ropgef Reaction.
Biol.Chem., 390, 2009
4P1G
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BU of 4p1g by Molmil
Crystal structure of the Bateman domain of murine magnesium transporter CNNM2 bound to AMP
Descriptor: ADENOSINE MONOPHOSPHATE, Metal transporter CNNM2
Authors:Corral-Rodriguez, M.A, Stuiver, M, Abascal-Palacios, G, Diercks, T, Oyenarte, I, Ereno-Orbea, J, Encinar, J.A, Spiwok, V, Terashima, H, Accardi, A, Muller, D, Martinez-Cruz, L.A.
Deposit date:2014-02-26
Release date:2015-03-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.603 Å)
Cite:Structural and ligand binding properties of the Bateman domain of human magnesium transporters CNNM2 and CNNM4
To Be Published
3WOK
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BU of 3wok by Molmil
Crystal structure of the DAP BII (Space)
Descriptor: GLYCEROL, ZINC ION, dipeptidyl aminopeptidase BII
Authors:Sakamoto, Y, Suzuki, Y, Iizuka, I, Tateoka, C, Roppongi, S, Fujimoto, M, Nonaka, T, Ogasawara, W, Tanaka, N.
Deposit date:2013-12-29
Release date:2014-09-03
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:S46 peptidases are the first exopeptidases to be members of clan PA
SCI REP, 4, 2014
1UAM
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BU of 1uam by Molmil
Crystal structure of tRNA(m1G37)methyltransferase: Insight into tRNA recognition
Descriptor: PHOSPHATE ION, S-ADENOSYL-L-HOMOCYSTEINE, tRNA (Guanine-N(1)-)-methyltransferase
Authors:Ahn, H.J, Kim, H.-W, Yoon, H.-J, Lee, B.I, Suh, S.W, Yang, J.K.
Deposit date:2003-03-11
Release date:2003-06-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of tRNA(m(1)G37)methyltransferase: insights into tRNA recognition
EMBO J., 22, 2003
5G2M
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BU of 5g2m by Molmil
Crystal structure of NagZ from Pseudomonas aeruginosa in complex with N-acetylglucosamine
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, BETA-HEXOSAMINIDASE
Authors:Acebron, I, Artola-Recolons, C, Mahasenan, K, Mobashery, S, Hermoso, J.A.
Deposit date:2016-04-09
Release date:2017-05-17
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Catalytic Cycle of the N-Acetylglucosaminidase NagZ from Pseudomonas aeruginosa.
J. Am. Chem. Soc., 139, 2017
6FIC
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BU of 6fic by Molmil
Bivalent Inhibitor UNC4512 Bound to the TAF1 Bromodomain Tandem
Descriptor: 3-azanyl-2-[3-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[2-[[3-azanyl-1-[[2-[[3-methyl-6-[4-methyl-3-(methylsulfonyl-$l^{2}-azanyl)cyclohexa-1,3,5-trien-1-yl]-[1,2,4]triazolo[4,3-b]pyridazin-8-yl]-$l^{2}-azanyl]-2-oxidanylidene-ethyl]amino]-1-oxidanylidene-propan-2-yl]amino]-2-oxidanylidene-ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]propanoylamino]-~{N}-[3-[[3-methyl-6-[4-methyl-3-(methylsulfonylamino)phenyl]-[1,2,4]triazolo[4,3-b]pyridazin-8-yl]amino]-3-oxidanylidene-propyl]propanamide, Transcription initiation factor TFIID subunit 1
Authors:Mathea, S, Suh, J.L, Salah, E, Tallant, C, Siejka, P, Pike, A.C.W, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, James, L.I, Frye, S.V, Knapp, S.
Deposit date:2018-01-17
Release date:2018-01-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Bivalent Inhibitor UNC4512 Bound to the TAF1 Bromodomain Tandem
To Be Published
1TXQ
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BU of 1txq by Molmil
Crystal structure of the EB1 C-terminal domain complexed with the CAP-Gly domain of p150Glued
Descriptor: Dynactin 1, Microtubule-associated protein RP/EB family member 1
Authors:Hayashi, I, Ikura, M.
Deposit date:2004-07-06
Release date:2005-09-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for the Activation of Microtubule Assembly by the EB1 and p150(Glued) Complex
Mol.Cell, 19, 2005
3RPZ
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BU of 3rpz by Molmil
Crystal Structure of ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Bacillus subtilis co-crystallized with ATP/Mg2+ and soaked with NADPH
Descriptor: ADENOSINE MONOPHOSPHATE, ADP/ATP-dependent NAD(P)H-hydrate dehydratase, BETA-6-HYDROXY-1,4,5,6-TETRAHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE, ...
Authors:Shumilin, I.A, Cymborowski, M, Joachimiak, A, Minor, W, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-04-27
Release date:2011-07-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012
2MPW
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BU of 2mpw by Molmil
Solution structure of the LysM region of the E. coli Intimin periplasmic domain
Descriptor: Intimin
Authors:Coles, M, Chaubey, M, Leo, J.C, Linke, D, Schuetz, M.C, Goetz, F, Autenrieth, I.B.
Deposit date:2014-06-05
Release date:2014-11-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Intimin periplasmic domain mediates dimerisation and binding to peptidoglycan.
Mol.Microbiol., 95, 2015
1TZX
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BU of 1tzx by Molmil
T. maritima NusB, P3221
Descriptor: CITRIC ACID, N utilization substance protein B homolog
Authors:Bonin, I, Robelek, R, Benecke, H, Urlaub, H, Bacher, A, Richter, G, Wahl, M.C.
Deposit date:2004-07-12
Release date:2004-08-31
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal structures of the antitermination factor NusB from Thermotoga maritima and implications for RNA binding
Biochem.J., 383, 2004
2N5G
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BU of 2n5g by Molmil
NMR structure of KorA, a plasmid-encoded, global transcription regulator KorA
Descriptor: TrfB transcriptional repressor protein
Authors:Rajasekar, K.V, Lovering, A.L, Dancea, F.V, Scott, D.J, Harris, S, Bingle, L.E, Roessle, M, Thomas, C.M, Hyde, E.I, White, S.A.
Deposit date:2015-07-17
Release date:2016-07-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Flexibility of KorA, a plasmid-encoded, global transcription regulator, in the presence and the absence of its operator.
Nucleic Acids Res., 44, 2016
2N9F
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BU of 2n9f by Molmil
Glucose as non natural nucleobase
Descriptor: DNA (5'-D(*CP*TP*AP*GP*CP*GP*GP*TP*CP*AP*TP*C)-3'), DNA (5'-D(*GP*AP*TP*GP*AP*CP*(4JA)P*GP*CP*TP*AP*G)-3')
Authors:Gomez-Pinto, I, Vengut-Climent, E, Lucas, R, Avino, A, Eritja, R, Gonzalez-Ibanez, C, Morales, J, Penalver, P, Fonseca-Guerra, C, Bickelhaupt, M.
Deposit date:2015-11-20
Release date:2016-08-31
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Glucose-Nucleobase Pseudo Base Pairs: Biomolecular Interactions within DNA.
Angew.Chem.Int.Ed.Engl., 55, 2016
3RTB
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BU of 3rtb by Molmil
Crystal structure of tm0922, a fusion of a domain of unknown function and ADP/ATP-dependent NAD(P)H-hydrate dehydratase from Thermotoga maritima soaked with Adenosine-3'-5'-Diphosphate
Descriptor: ADENOSINE-3'-5'-DIPHOSPHATE, GLYCEROL, POTASSIUM ION, ...
Authors:Shumilin, I.A, Cymborowski, M, Lesley, S.A, Minor, W.
Deposit date:2011-05-03
Release date:2011-07-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Identification of unknown protein function using metabolite cocktail screening.
Structure, 20, 2012
3R06
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BU of 3r06 by Molmil
Crystal structure of anti-mouse CD3epsilon antibody 2C11 Fab fragment
Descriptor: anti-mouse CD3epsilon antibody 2C11 Fab heavy chain, anti-mouse CD3epsilon antibody 2C11 Fab light chain
Authors:Shore, D.A, Zhu, X, Wilson, I.A.
Deposit date:2011-03-07
Release date:2012-01-25
Last modified:2013-09-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:T cell receptors are structures capable of initiating signaling in the absence of large conformational rearrangements.
J.Biol.Chem., 287, 2012
1U3O
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BU of 1u3o by Molmil
Solution structure of rat Kalirin N-terminal SH3 domain
Descriptor: Huntingtin-associated protein-interacting protein
Authors:Schiller, M.R, Chakrabarti, K, King, G.F, Schiller, N.I, Eipper, B.A, Maciejewski, M.W.
Deposit date:2004-07-22
Release date:2005-07-26
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Regulation of RhoGEF Activity by Intramolecular and Intermolecular SH3 Domain Interactions.
J.Biol.Chem., 281, 2006
1U9L
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BU of 1u9l by Molmil
Structural basis for a NusA- protein N interaction
Descriptor: GOLD ION, Lambda N, Transcription elongation protein nusA
Authors:Bonin, I, Muehlberger, R, Bourenkov, G.P, Huber, R, Bacher, A, Richter, G, Wahl, M.C.
Deposit date:2004-08-10
Release date:2004-08-31
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for the interaction of Escherichia coli NusA with protein N of phage lambda
Proc.Natl.Acad.Sci.Usa, 101, 2004
5GSP
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BU of 5gsp by Molmil
RIBONUCLEASE T1/3'-GMP, 9 WEEKS
Descriptor: CALCIUM ION, GUANOSINE-3'-MONOPHOSPHATE, RIBONUCLEASE T1
Authors:Zegers, I, Wyns, L.
Deposit date:1997-12-09
Release date:1998-03-18
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Hydrolysis of a slow cyclic thiophosphate substrate of RNase T1 analyzed by time-resolved crystallography.
Nat.Struct.Biol., 5, 1998
5OWX
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BU of 5owx by Molmil
Inside-out FMDV A10 capsid
Descriptor: Genome polyprotein
Authors:Kotecha, A, Malik, N, Fry, E.E, Stuart, D.I.
Deposit date:2017-09-04
Release date:2017-09-20
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (5.2 Å)
Cite:Structures of foot and mouth disease virus pentamers: Insight into capsid dissociation and unexpected pentamer reassociation.
PLoS Pathog., 13, 2017
2NAJ
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BU of 2naj by Molmil
Solution structure of K2 lobe of double-knot toxin
Descriptor: Tau-theraphotoxin-Hs1a
Authors:Bae, C, Anselmi, C, Kalia, J, Jara-Oseguera, A, Schwieters, C.D, Krepkiy, D, Lee, C.W, Kim, E.H, Kim, J.I, Faraldo-Gomez, J.D, Swartz, K.J.
Deposit date:2016-01-04
Release date:2016-03-02
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural insights into the mechanism of activation of the TRPV1 channel by a membrane-bound tarantula toxin
Elife, 5, 2016
1UDD
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BU of 1udd by Molmil
TenA homologue protein from P.horikoshii OT3
Descriptor: transcriptional regulator
Authors:Itou, H, Yao, M, Watanabe, N, Tanaka, I.
Deposit date:2003-04-28
Release date:2004-06-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure analysis of PH1161 protein, a transcriptional activator TenA homologue from the hyperthermophilic archaeon Pyrococcus horikoshii.
Acta Crystallogr.,Sect.D, 60, 2004
6B8D
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BU of 6b8d by Molmil
1.78 Angstrom Resolution Crystal Structure of N-terminal Fragment (residues 1-405) of Elongation Factor G from Haemophilus influenzae
Descriptor: CHLORIDE ION, Elongation factor G
Authors:Minasov, G, Shuvalova, L, Dubrovska, I, Kiryukhina, O, Grimshaw, S, Kwon, K, Anderson, W.F, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-10-06
Release date:2017-10-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:1.78 Angstrom Resolution Crystal Structure of N-terminal Fragment (residues 1-405) of Elongation Factor G from Haemophilus influenzae.
To Be Published
2NDP
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BU of 2ndp by Molmil
Structure of DNA-binding HU protein from micoplasma Mycoplasma gallisepticum
Descriptor: Histone-like DNA-binding superfamily protein
Authors:Altukhov, D.A, Talyzina, A.A, Agapova, Y.K, Vlaskina, A.V, Korzhenevskiy, D.A, Bocharov, E.V, Rakitina, T.V, Timofeev, V.I, Popov, V.O.
Deposit date:2016-09-13
Release date:2016-11-09
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Enhanced conformational flexibility of the histone-like (HU) protein from Mycoplasma gallisepticum.
J.Biomol.Struct.Dyn., 36, 2018
5FSA
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BU of 5fsa by Molmil
Crystal structure of sterol 14-alpha demethylase (CYP51) from a pathogenic yeast Candida albicans in complex with the antifungal drug posaconazole
Descriptor: CYP51 VARIANT1, POSACONAZOLE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Hargrove, T.Y, Wawrzak, Z, Friggeri, L, Lepesheva, G.I.
Deposit date:2016-01-02
Release date:2017-03-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Structural analyses of Candida albicans sterol 14 alpha-demethylase complexed with azole drugs address the molecular basis of azole-mediated inhibition of fungal sterol biosynthesis.
J. Biol. Chem., 292, 2017
3RAE
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BU of 3rae by Molmil
Quinolone(Levofloxacin)-DNA cleavage complex of type IV topoisomerase from S. pneumoniae
Descriptor: (3S)-9-fluoro-3-methyl-10-(4-methylpiperazin-1-yl)-7-oxo-2,3-dihydro-7H-[1,4]oxazino[2,3,4-ij]quinoline-6-carboxylic acid, 5'-D(*CP*AP*TP*GP*AP*AP*T)-3', 5'-D(*CP*GP*TP*GP*CP*AP*T)-3', ...
Authors:Laponogov, I, Pan, X.-S, Veselkov, D.A, McAuley, K.E, Fisher, L.M, Sanderson, M.R.
Deposit date:2011-03-28
Release date:2012-04-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure of a quinolone-stabilized cleavage complex of topoisomerase IV from Klebsiella pneumoniae and comparison with a related Streptococcus pneumoniae complex.
Acta Crystallogr.,Sect.D, 72, 2016
5FJ7
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BU of 5fj7 by Molmil
Structure of the P2 polymerase inside in vitro assembled bacteriophage phi6 polymerase complex, with P1 included
Descriptor: MAJOR INNER PROTEIN P1, MANGANESE (II) ION, RNA-DIRECTED RNA POLYMERASE
Authors:Ilca, S, Kotecha, A, Sun, X, Poranen, M.P, Stuart, D.I, Huiskonen, J.T.
Deposit date:2015-10-06
Release date:2015-11-04
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (7.9 Å)
Cite:Localized Reconstruction of Subunits from Electron Cryomicroscopy Images of Macromolecular Complexes.
Nat.Commun., 6, 2015

223790

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