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PDB: 17822 件

3UEK
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Crystal structure of the catalytic domain of rat poly (ADP-ribose) glycohydrolase
分子名称: Poly(ADP-ribose) glycohydrolase
著者Kim, I.K, Kiefer, J.R, Stegemann, R.A, Classen, S, Tainer, J.A, Ellenberger, T.
登録日2011-10-30
公開日2012-05-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure of mammalian poly(ADP-ribose) glycohydrolase reveals a flexible tyrosine clasp as a substrate-binding element.
Nat.Struct.Mol.Biol., 19, 2012
3QQI
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Crystal structure of the HA1 receptor binding domain of H2 hemagglutinin
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Hemagglutinin
著者Xu, R, Wilson, I.A.
登録日2011-02-15
公開日2011-03-09
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural Characterization of an Early Fusion Intermediate of Influenza Virus Hemagglutinin.
J.Virol., 85, 2011
3R0W
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Crystal Structures of Multidrug-resistant HIV-1 Protease in Complex with Mechanism-Based Aspartyl Protease Inhibitors.
分子名称: Multidrug-resistant clinical isolate 769 HIV-1 Protease, N-[(2R)-1-{[(2S,3S)-5-{[(2R)-1-{[(2S)-1-amino-4-methyl-1-oxopentan-2-yl]amino}-3-chloro-1-oxopropan-2-yl]amino}-3-hydroxy-5-oxo-1-phenylpentan-2-yl]amino}-3-methyl-1-oxobutan-2-yl]pyridine-2-carboxamide
著者Yedidi, R.S, Gupta, D, Liu, Z, Brunzelle, J, Kovari, I.A, Woster, P.M, Kovari, L.C.
登録日2011-03-09
公開日2012-04-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structures of multidrug-resistant HIV-1 protease in complex with two potent anti-malarial compounds.
Biochem.Biophys.Res.Commun., 421, 2012
3VBR
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Crystal structure of formaldehyde treated empty human Enterovirus 71 particle (room temperature)
分子名称: Genome Polyprotein, capsid protein VP0, capsid protein VP1, ...
著者Wang, X, Peng, W, Ren, J, Hu, Z, Xu, J, Lou, Z, Li, X, Yin, W, Shen, X, Porta, C, Walter, T.S, Evans, G, Axford, D, Owen, R, Rowlands, D.J, Wang, J, Stuart, D.I, Fry, E.E, Rao, Z.
登録日2012-01-02
公開日2012-02-29
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献A sensor-adaptor mechanism for enterovirus uncoating from structures of EV71.
Nat.Struct.Mol.Biol., 19, 2012
3R6J
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Crystal Structure of the Capsid P Domain from Norwalk Virus Strain Hiroshima/1999
分子名称: 1,2-ETHANEDIOL, VP1 protein
著者Hansman, G.S, Biertumpfel, C, McLellan, J.S, Georgiev, I, Chen, L, Zhou, T, Katayama, K, Kwong, P.D.
登録日2011-03-21
公開日2011-05-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structures of GII.10 and GII.12 norovirus protruding domains in complex with histo-blood group antigens reveal details for a potential site of vulnerability.
J.Virol., 85, 2011
3VIH
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Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with glycerol
分子名称: Beta-glucosidase, CHLORIDE ION, GLYCEROL, ...
著者Jeng, W.Y, Liu, C.I, Wang, A.H.J.
登録日2011-10-03
公開日2012-07-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.03 Å)
主引用文献High-resolution structures of Neotermes koshunensis beta-glucosidase mutants provide insights into the catalytic mechanism and the synthesis of glucoconjugates
Acta Crystallogr.,Sect.D, 68, 2012
3VO8
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Staphylococcus aureus FtsZ GDP-form
分子名称: CALCIUM ION, Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
著者Matsui, T, Mogi, N, Yao, M, Tanaka, I.
登録日2012-01-20
公開日2012-08-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.255 Å)
主引用文献Structural reorganization of the bacterial cell-division protein FtsZ from Staphylococcus aureus
Acta Crystallogr.,Sect.D, 68, 2012
3VTG
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High choriolytic enzyme 1 (HCE-1), a hatching enzyme zinc-protease from Oryzias latipes (Medaka fish)
分子名称: High choriolytic enzyme 1, ZINC ION
著者Kudo, N, Yasumasu, S, Iuchi, I, Tanokura, M.
登録日2012-05-30
公開日2013-06-05
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Crystal Structure of High choriolytic enzyme 1 (HCE-1), a hatching enzyme from Oryzias latipes (Medaka fish)
To be Published
3RPE
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1.1 Angstrom Crystal Structure of Putative Modulator of Drug Activity (MdaB) from Yersinia pestis CO92.
分子名称: DI(HYDROXYETHYL)ETHER, FLAVIN-ADENINE DINUCLEOTIDE, Modulator of drug activity B
著者Minasov, G, Halavaty, A, Shuvalova, L, Dubrovska, I, Winsor, J, Papazisi, L, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2011-04-26
公開日2011-05-04
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献1.1 Angstrom Crystal Structure of Putative Modulator of Drug Activity (MdaB) from Yersinia pestis CO92.
TO BE PUBLISHED
3R6N
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Crystal structure of a rigid four spectrin repeat fragment of the human desmoplakin plakin domain
分子名称: (4S,5S)-1,2-DITHIANE-4,5-DIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Desmoplakin
著者Choi, H.-J, Weis, W.I.
登録日2011-03-22
公開日2011-05-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Crystal structure of a rigid four-spectrin-repeat fragment of the human desmoplakin plakin domain.
J.Mol.Biol., 409, 2011
3VPA
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Staphylococcus aureus FtsZ apo-form
分子名称: Cell division protein FtsZ
著者Matsui, T, Yamane, J, Mogi, N, Yao, M, Tanaka, I.
登録日2012-02-28
公開日2012-08-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.487 Å)
主引用文献Structural reorganization of the bacterial cell-division protein FtsZ from Staphylococcus aureus
Acta Crystallogr.,Sect.D, 68, 2012
3RF9
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X-ray structure of RlmN from Escherichia coli
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, IRON/SULFUR CLUSTER, Ribosomal RNA large subunit methyltransferase N
著者Boal, A.K, Grove, T.L, McLaughlin, M.I, Yennawar, N, Booker, S.J, Rosenzweig, A.C.
登録日2011-04-05
公開日2011-05-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for methyl transfer by a radical SAM enzyme.
Science, 332, 2011
3RXB
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Crystal structure of Trypsin complexed with 4-guanidinobutanoic acid
分子名称: 4-carbamimidamidobutanoic acid, CALCIUM ION, Cationic trypsin, ...
著者Yamane, J, Yao, M, Zhou, Y, Tanaka, I.
登録日2011-05-10
公開日2011-08-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献In-crystal affinity ranking of fragment hit compounds reveals a relationship with their inhibitory activities
J.Appl.Crystallogr., 44, 2011
3RXD
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Crystal structure of Trypsin complexed with (3-methoxyphenyl)methanamine
分子名称: 1-(3-methoxyphenyl)methanamine, CALCIUM ION, Cationic trypsin, ...
著者Yamane, J, Yao, M, Zhou, Y, Tanaka, I.
登録日2011-05-10
公開日2011-08-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献In-crystal affinity ranking of fragment hit compounds reveals a relationship with their inhibitory activities
J.Appl.Crystallogr., 44, 2011
3VRH
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BU of 3vrh by Molmil
Crystal structure of ph0300
分子名称: BICINE, Putative uncharacterized protein PH0300, ZINC ION
著者Nakagawa, H, Kuratani, M, Goto-Ito, S, Ito, T, Sekine, S.I, Yokoyama, S.
登録日2012-04-10
公開日2013-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystallographic and mutational studies on the tRNA thiouridine synthetase TtuA.
Proteins, 2013
3VIN
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BU of 3vin by Molmil
Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with a new glucopyranosidic product
分子名称: 2-{4-[2-(beta-D-glucopyranosyloxy)ethyl]piperazin-1-yl}ethanesulfonic acid, Beta-glucosidase, CHLORIDE ION, ...
著者Jeng, W.Y, Liu, C.I, Wang, A.H.J.
登録日2011-10-03
公開日2012-07-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献High-resolution structures of Neotermes koshunensis beta-glucosidase mutants provide insights into the catalytic mechanism and the synthesis of glucoconjugates
Acta Crystallogr.,Sect.D, 68, 2012
3VOB
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Staphylococcus aureus FtsZ with PC190723
分子名称: 3-[(6-chloro[1,3]thiazolo[5,4-b]pyridin-2-yl)methoxy]-2,6-difluorobenzamide, CALCIUM ION, Cell division protein FtsZ, ...
著者Yamane, J, Matsui, T, Mogi, N, Yamaguchi, H, Takemoto, H, Yao, M, Tanaka, I.
登録日2012-01-20
公開日2012-08-29
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.703 Å)
主引用文献Structural reorganization of the bacterial cell-division protein FtsZ from Staphylococcus aureus
Acta Crystallogr.,Sect.D, 68, 2012
3PSL
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Fine-tuning the stimulation of MLL1 methyltransferase activity by a histone H3 based peptide mimetic
分子名称: N-alpha acetylated form of histone H3, WD repeat-containing protein 5
著者Avdic, V, Zhang, P, Lanouette, S, Voronova, A, Skerjanc, I, Couture, J.-F.
登録日2010-12-01
公開日2010-12-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Fine-tuning the stimulation of MLL1 methyltransferase activity by a histone H3-based peptide mimetic.
Faseb J., 25, 2011
3VW5
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Crystal structure of sugar epimerase from ruminal bacterium
分子名称: Cellobiose 2-epimerase
著者Fujiwara, T, Saburi, W, Tanaka, I, Yao, M.
登録日2012-08-02
公開日2013-06-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of Ruminococcus albus cellobiose 2-epimerase: structural insights into epimerization of unmodified sugar
Febs Lett., 587, 2013
3PSU
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HIV-1 protease in complex with an isobutyl decorated oligoamine (symmetric binding mode)
分子名称: CHLORIDE ION, N,N'-(iminodiethane-2,1-diyl)bis[4-amino-N-(2-methylpropyl)benzenesulfonamide], Protease
著者Lindemann, I, Heine, A, Klebe, G.
登録日2010-12-02
公開日2011-12-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Multiple binding modes of a symmetric inhibitor in HIV-1 protease
To be Published
3VI6
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Crystal Structure of human ribosomal protein L30e
分子名称: 60S ribosomal protein L30, FORMIC ACID
著者Kawaguchi, A, Ose, T, Yao, M, Tanaka, I.
登録日2011-09-21
公開日2011-12-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Crystallization and preliminary X-ray structure analysis of human ribosomal protein L30e
Acta Crystallogr.,Sect.F, 67, 2011
3PYM
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BU of 3pym by Molmil
Structure of GAPDH 3 from S.cerevisiae at 2.0 A resolution
分子名称: Glyceraldehyde-3-phosphate dehydrogenase 3, MESO-ERYTHRITOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Garcia-Saez, I, Kozielski, F, Job, D, Boscheron, C.
登録日2010-12-13
公開日2012-01-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献

3VIK
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Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with cellobiose
分子名称: 1,2-ETHANEDIOL, Beta-glucosidase, CHLORIDE ION, ...
著者Jeng, W.Y, Liu, C.I, Wang, A.H.J.
登録日2011-10-03
公開日2012-07-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献High-resolution structures of Neotermes koshunensis beta-glucosidase mutants provide insights into the catalytic mechanism and the synthesis of glucoconjugates
Acta Crystallogr.,Sect.D, 68, 2012
3VJ9
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Crystal structure of the human squalene synthase
分子名称: CALCIUM ION, NICKEL (II) ION, Squalene synthase
著者Liu, C.I, Jeng, W.Y, Chang, W.J, Wang, A.H.J.
登録日2011-10-14
公開日2012-04-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Binding modes of zaragozic acid A to human squalene synthase and staphylococcal dehydrosqualene synthase
J.Biol.Chem., 287, 2012
3PV1
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Crystal structure of the USP15 DUSP-UBL domains
分子名称: ACETATE ION, Ubiquitin carboxyl-terminal hydrolase 15
著者Elliott, P.R, Urbe, S, Clague, M.J, Barsukov, I.L.
登録日2010-12-06
公開日2011-11-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural variability of the ubiquitin specific protease DUSP-UBL double domains.
Febs Lett., 585, 2011

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