Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 17822 件

4LP0
DownloadVisualize
BU of 4lp0 by Molmil
Crystal structure of a topoisomerase ATP inhibitor
分子名称: 6'-[(ethylcarbamoyl)amino]-4'-[4-(trifluoromethyl)-1,3-thiazol-2-yl]-3,3'-bipyridine-5-carboxylic acid, Topoisomerase IV subunit B
著者Basarab, G.S, Manchester, J.I, Bist, S, Boriack-Sjodin, P.A, Dangel, B, Illingsworth, R, Uria-Nickelsen, M, Sherer, B.A, Sriram, S, Eakin, A.E.
登録日2013-07-14
公開日2013-11-13
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Fragment-to-Hit-to-Lead Discovery of a Novel Pyridylurea Scaffold of ATP Competitive Dual Targeting Type II Topoisomerase Inhibiting Antibacterial Agents.
J.Med.Chem., 56, 2013
4ME3
DownloadVisualize
BU of 4me3 by Molmil
1.8 Angstrom Crystal Structure of the N-terminal Domain of an Archaeal MCM
分子名称: DNA replication licensing factor MCM related protein, ZINC ION
著者Fu, Y, Slaymaker, I.M, Wang, G, Chen, X.S.
登録日2013-08-24
公開日2014-01-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.794 Å)
主引用文献The 1.8- angstrom Crystal Structure of the N-Terminal Domain of an Archaeal MCM as a Right-Handed Filament.
J.Mol.Biol., 426, 2014
3QR6
DownloadVisualize
BU of 3qr6 by Molmil
Crystal Structure Analysis of H185F Mutant of Human CLIC1
分子名称: Chloride intracellular channel protein 1
著者Fanucchi, S, Achilonu, I.A, Fernandes, M.A, Dirr, H.W.
登録日2011-02-17
公開日2011-03-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Role of individual histidines in the pH-dependent global stability of human chloride intracellular channel 1.
Biochemistry, 51, 2012
4D6G
DownloadVisualize
BU of 4d6g by Molmil
Crystal structure of a family 98 glycoside hydrolase catalytic module (Sp3GH98) in complex with the blood group A-trisaccharide (L19 mutant)
分子名称: 1,2-ETHANEDIOL, GLYCOSIDE HYDROLASE, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]alpha-D-galactopyranose
著者Kwan, D.H, Constantinescu, I, Chapanian, R, Higgins, M.A, Samain, E, Boraston, A.B, Kizhakkedathu, J.N, Withers, S.G.
登録日2014-11-11
公開日2014-11-26
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Towards Efficient Enzymes for the Generation of Universal Blood Through Structure-Guided Directed Evolution.
J.Am.Chem.Soc., 137, 2015
4D71
DownloadVisualize
BU of 4d71 by Molmil
Crystal structure of a family 98 glycoside hydrolase catalytic module (Sp3GH98) in complex with the type 2 blood group A-tetrasaccharide (E558A X02 mutant)
分子名称: 1,2-ETHANEDIOL, GLYCOSIDE HYDROLASE, SULFATE ION, ...
著者Kwan, D.H, Constantinescu, I, Chapanian, R, Higgins, M.A, Samain, E, Boraston, A.B, Kizhakkedathu, J.N, Withers, S.G.
登録日2014-11-19
公開日2015-01-21
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Towards Efficient Enzymes for the Generation of Universal Blood Through Structure-Guided Directed Evolution.
J.Am.Chem.Soc., 137, 2015
4M61
DownloadVisualize
BU of 4m61 by Molmil
Crystal structure of unliganded anti-DNA Fab A52
分子名称: Fab A52 heavy chain, Fab A52 light chain, SULFATE ION
著者Stanfield, R.L, Eilat, D, Wilson, I.A.
登録日2013-08-08
公開日2013-08-28
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.62 Å)
主引用文献Crystal structure determination of anti-DNA Fab A52.
Proteins, 82, 2014
4M6K
DownloadVisualize
BU of 4m6k by Molmil
Crystal structure of human dihydrofolate reductase (DHFR) bound to NADP+ and folate
分子名称: Dihydrofolate reductase, FOLIC ACID, GLYCEROL, ...
著者Bhabha, G, Ekiert, D.C, Wright, P.E, Wilson, I.A.
登録日2013-08-09
公開日2013-09-25
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.396 Å)
主引用文献Divergent evolution of protein conformational dynamics in dihydrofolate reductase.
Nat.Struct.Mol.Biol., 20, 2013
4LRX
DownloadVisualize
BU of 4lrx by Molmil
Crystal Structure of the E.coli DhaR(N)-DhaK complex
分子名称: GLYCEROL, PTS-dependent dihydroxyacetone kinase operon regulatory protein, PTS-dependent dihydroxyacetone kinase, ...
著者Shi, R, McDonald, L, Cygler, M, Ekiel, I.
登録日2013-07-21
公開日2014-01-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Coiled-Coil Helix Rotation Selects Repressing or Activating State of Transcriptional Regulator DhaR.
Structure, 22, 2014
5U48
DownloadVisualize
BU of 5u48 by Molmil
Wild-type Transthyretin in complex with 5-[(1E)-2-(4-Boronic acid)ethenyl]-1,3-benzenediol
分子名称: Transthyretin, {4-[(E)-2-(3,5-dihydroxyphenyl)ethenyl]phenyl}boronic acid
著者Windsor, I.W, Smith, T.P, Raines, R.T, Forest, K.T.
登録日2016-12-03
公開日2017-09-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Stilbene Boronic Acids Form a Covalent Bond with Human Transthyretin and Inhibit Its Aggregation.
J. Med. Chem., 60, 2017
5U4F
DownloadVisualize
BU of 5u4f by Molmil
Wild-type Transthyretin in complex with 1,1'-(1E)-(1,2-Ethenediyl)bis[2-chloro-4-boronic acid]benzene
分子名称: Transthyretin, [(E)-ethene-1,2-diylbis(3-chloro-4,1-phenylene)]diboronic acid
著者Windsor, I.W, Smith, T.P, Raines, R.T, Forest, K.T.
登録日2016-12-03
公開日2017-09-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Stilbene Boronic Acids Form a Covalent Bond with Human Transthyretin and Inhibit Its Aggregation.
J. Med. Chem., 60, 2017
4C0X
DownloadVisualize
BU of 4c0x by Molmil
The crystal strucuture of PpAzoR in complex with anthraquinone-2- sulfonate
分子名称: 9,10-dioxo-9,10-dihydroanthracene-2-sulfonic acid, FLAVIN MONONUCLEOTIDE, FMN-DEPENDENT NADH-AZOREDUCTASE 1, ...
著者Goncalves, A.M.D, de Sanctis, D, Bento, I.
登録日2013-08-08
公開日2013-10-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.499 Å)
主引用文献The Crystal Structure of Pseudomonas Putida Azor: The Active Site Revisited.
FEBS J., 280, 2013
5U4B
DownloadVisualize
BU of 5u4b by Molmil
Wild-type Transthyretin in complex with 3-[(1E)-2-(4-Hydroxyphenyl)ethenyl]benzoic Acid
分子名称: 3-[(E)-2-(4-hydroxyphenyl)ethenyl]benzoic acid, Transthyretin
著者Windsor, I.W, Smith, T.P, Raines, R.T, Forest, K.T.
登録日2016-12-03
公開日2017-09-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.448 Å)
主引用文献Stilbene Boronic Acids Form a Covalent Bond with Human Transthyretin and Inhibit Its Aggregation.
J. Med. Chem., 60, 2017
5TSE
DownloadVisualize
BU of 5tse by Molmil
2.35 Angstrom Crystal Structure Minor Lipoprotein from Acinetobacter baumannii.
分子名称: FORMIC ACID, LPS-assembly lipoprotein LptE
著者Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Grimshaw, S, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-10-28
公開日2016-11-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献2.35 Angstrom Crystal Structure Minor Lipoprotein from Acinetobacter baumannii.
To Be Published
4LUN
DownloadVisualize
BU of 4lun by Molmil
Structure of the N-terminal mIF4G domain from S. cerevisiae Upf2, a protein involved in the degradation of mRNAs containing premature stop codons
分子名称: CHLORIDE ION, Nonsense-mediated mRNA decay protein 2
著者Fourati, Z, Roy, B, Millan, C, Courreux, P.D, Kervestin, S, van Tilbeurgh, H, He, F, Uson, I, Jacobson, A, Graille, M.
登録日2013-07-25
公開日2014-07-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.641 Å)
主引用文献A highly conserved region essential for NMD in the Upf2 N-terminal domain.
J.Mol.Biol., 426, 2014
4LYB
DownloadVisualize
BU of 4lyb by Molmil
CdS within a lysoyzme single crystal
分子名称: CADMIUM ION, Lysozyme C
著者Wei, H, House, S, Wu, J, Zhang, J, Wang, Z, He, Y, Gao, Y.-G, Robinson, H, Li, W, Zuo, J.-M, Robertson, I.M, Lu, Y.
登録日2013-07-30
公開日2015-02-25
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献Enhanced and tunable fluorescent quantum dots within a single crystal of protein
TO BE PUBLISHED
5U38
DownloadVisualize
BU of 5u38 by Molmil
Crystal structure of native lectin from Platypodium elegans seeds (PELa) complexed with Man1-3Man-OMe.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Lectin, ...
著者Silva, I.B, Araripe, D.A, Neco, A.H.B, Pinto-Junior, V.R, Osterne, V.J.S, Santiago, M.Q, Silva-Filho, J.C, Leal, R.B, Rocha, C.R.C, Nascimento, K.S, Cavada, B.S.
登録日2016-12-01
公開日2017-10-04
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural studies and nociceptive activity of a native lectin from Platypodium elegans seeds (nPELa).
Int. J. Biol. Macromol., 107, 2018
3W0H
DownloadVisualize
BU of 3w0h by Molmil
Crystal Structure of Rat VDR Ligand Binding Domain in Complex with Novel Nonsecosteroidal Ligands
分子名称: (2S)-3-{4-[4-(4-{[(2R)-2-hydroxy-3,3-dimethylbutyl]oxy}phenyl)heptan-4-yl]phenoxy}propane-1,2-diol, Mediator of RNA polymerase II transcription subunit 1, Vitamin D3 receptor
著者Shimizu, T, Asano, L, Kuwabara, N, Ito, I, Waku, T, Yanagisawa, J, Miyachi, H.
登録日2012-10-30
公開日2013-10-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for vitamin D receptor agonism by novel non-secosteroidal ligands.
Febs Lett., 587, 2013
4EC0
DownloadVisualize
BU of 4ec0 by Molmil
Crystal structure of hH-PGDS with water displacing inhibitor
分子名称: 4-[2-(aminomethyl)naphthalen-1-yl]-N-[2-(morpholin-4-yl)ethyl]benzamide, GLUTATHIONE, Hematopoietic prostaglandin D synthase, ...
著者Day, J.E, Thorarensen, A, Trujillo, J.I.
登録日2012-03-26
公開日2012-05-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Investigation of the binding pocket of human hematopoietic prostaglandin (PG) D2 synthase (hH-PGDS): a tale of two waters.
Bioorg.Med.Chem.Lett., 22, 2012
5TOA
DownloadVisualize
BU of 5toa by Molmil
Crystal Structure of ER beta bound to Estradiol
分子名称: ESTRADIOL, Estrogen receptor beta
著者Textor, L, Nascimento, A.S, Polikarpov, I.
登録日2016-10-17
公開日2017-06-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献An alternative conformation of ER beta bound to estradiol reveals H12 in a stable antagonist position.
Sci Rep, 7, 2017
5TRO
DownloadVisualize
BU of 5tro by Molmil
1.8 Angstrom Resolution Crystal Structure of Dimerization and Transpeptidase domains (residues 39-608) of Penicillin-Binding Protein 1 from Staphylococcus aureus.
分子名称: CHLORIDE ION, Penicillin-binding protein 1
著者Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Grimshaw, S, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-10-26
公開日2016-11-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献1.8 Angstrom Resolution Crystal Structure of Dimerization and Transpeptidase domains (residues 39-608) of Penicillin-Binding Protein 1 from Staphylococcus aureus.
To Be Published
3W0J
DownloadVisualize
BU of 3w0j by Molmil
Crystal Structure of Rat VDR Ligand Binding Domain in Complex with Novel Nonsecosteroidal Ligands
分子名称: (2S)-3-{4-[2-(4-{[(2R)-2-hydroxy-3,3-dimethylbutyl]oxy}-3-methylphenyl)propan-2-yl]-2-methylphenoxy}propane-1,2-diol, Mediator of RNA polymerase II transcription subunit 1, Vitamin D3 Receptor
著者Shimizu, T, Asano, L, Kuwabara, N, Ito, I, Waku, T, Yanagisawa, J, Miyachi, H.
登録日2012-10-30
公開日2013-10-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural basis for vitamin D receptor agonism by novel non-secosteroidal ligands.
Febs Lett., 587, 2013
4E5Z
DownloadVisualize
BU of 4e5z by Molmil
Damaged DNA induced UV-damaged DNA-binding protein (UV-DDB) dimerization and its roles in chromatinized DNA repair
分子名称: AP24 DNA complementary strand, AP24 DNA strand, DNA damage-binding protein 1, ...
著者Yeh, J.I, Du, S.
登録日2012-03-15
公開日2012-08-22
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.22 Å)
主引用文献Damaged DNA induced UV-damaged DNA-binding protein (UV-DDB) dimerization and its roles in chromatinized DNA repair.
Proc.Natl.Acad.Sci.USA, 109, 2012
5TSD
DownloadVisualize
BU of 5tsd by Molmil
Crystal structure of NADPH-dependent 2-hydroxyacid dehydrogenase from Rhizobium etli CFN 42 in complex with NADPH and oxalate
分子名称: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, OXALIC ACID, Probable hydroxyacid dehydrogenase protein
著者Matelska, D, Shabalin, I.G, Kutner, J, Handing, K.B, Gasiorowska, O.A, Cooper, D.R, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2016-10-28
公開日2016-11-16
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of NADPH-dependent 2-hydroxyacid dehydrogenase from Rhizobium etli CFN 42 in complex with NADPH and oxalate
to be published
3W0G
DownloadVisualize
BU of 3w0g by Molmil
Crystal Structure of Rat VDR Ligand Binding Domain in Complex with Novel Nonsecosteroidal Ligands
分子名称: (2S)-3-{4-[2-(4-{[(2R)-2-hydroxy-3,3-dimethylbutyl]oxy}phenyl)propan-2-yl]phenoxy}propane-1,2-diol, Mediator of RNA polymerase II transcription subunit 1, Vitamin D3 receptor
著者Shimizu, T, Asano, L, Kuwabara, N, Ito, I, Waku, T, Yanagisawa, J, Miyachi, H.
登録日2012-10-30
公開日2013-10-09
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Structural basis for vitamin D receptor agonism by novel non-secosteroidal ligands.
Febs Lett., 587, 2013
5TV2
DownloadVisualize
BU of 5tv2 by Molmil
Crystal structure of a fragment (1-405) of an elongation factor G from Vibrio vulnificus CMCP6
分子名称: Elongation factor G
著者Filippova, E.V, Minasov, G, Shuvalova, L, Cardona-Correa, A, Dubrovska, I, Grimshaw, S, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-11-07
公開日2016-11-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of a fragment (1-405) of an elongation factor G from Vibrio vulnificus CMCP6
To Be Published

223790

件を2024-08-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon