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PDB: 17822 件

3CH5
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The crystal structure of the RanGDP-Nup153ZnF2 complex
分子名称: Fragment of Nuclear pore complex protein Nup153, GTP-binding nuclear protein Ran, GUANOSINE-5'-DIPHOSPHATE, ...
著者Vetter, I.R, Schrader, N.
登録日2008-03-07
公開日2008-07-01
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The Crystal Structure of the Ran-Nup153ZnF2 Complex: a General Ran Docking Site at the Nuclear Pore Complex
Structure, 16, 2008
6MNF
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Anti-HIV-1 Fab 2G12 + Man8 re-refinement
分子名称: Fab 2G12, light chain, Fab 2g12, ...
著者Calarese, D.A, Stanfield, R.L, Wilson, I.A.
登録日2018-10-01
公開日2018-10-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.758 Å)
主引用文献Dissection of the carbohydrate specificity of the broadly neutralizing anti-HIV-1 antibody 2G12.
Proc. Natl. Acad. Sci. U.S.A., 102, 2005
6MOU
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Bacteroides intestinalis feruloyl esterase, Bacint_01033
分子名称: 1,2-ETHANEDIOL, Isoamylase N-terminal domain protein
著者Koropatkin, N.M, Pereira, G.V, Cann, I.
登録日2018-10-04
公開日2019-10-16
最終更新日2021-01-27
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Degradation of complex arabinoxylans by human colonic Bacteroidetes
Nat Commun, 2021
6JYI
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Crystal structure of the PadR-like transcriptional regulator BC1756 from Bacillus cereus
分子名称: Transcriptional repressor PadR
著者Kim, T.H, Park, S.C, Lee, K.C, Song, W.S, Yoon, S.I.
登録日2019-04-26
公開日2019-06-26
最終更新日2019-07-10
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structural and DNA-binding studies of the PadR-like transcriptional regulator BC1756 from Bacillus cereus.
Biochem.Biophys.Res.Commun., 515, 2019
4CN1
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GlgE isoform 1 from Streptomyces coelicolor D394A mutant with maltose- 1-phosphate bound
分子名称: ALPHA-1,4-GLUCAN: MALTOSE-1-PHOSPHATE MALTOSYLTRANSFERASE 1, alpha-D-glucopyranose-(1-4)-1-O-phosphono-alpha-D-glucopyranose
著者Syson, K, Stevenson, C.E.M, Rashid, A.M, Saalbach, G, Tang, M, Tuukanen, A, Svergun, D.I, Withers, S.G, Lawson, D.M, Bornemann, S.
登録日2014-01-21
公開日2014-05-21
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural Insight Into How Streptomyces Coelicolor Maltosyl Transferase Glge Binds Alpha-Maltose 1-Phosphate and Forms a Maltosyl-Enzyme Intermediate.
Biochemistry, 53, 2014
6NTD
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Crystal Structure of G12V HRas-GppNHp bound in complex with the engineered RBD variant 12 of CRAF Kinase protein
分子名称: GTPase HRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
著者Maisonneuve, P, Kurinov, I, Wiechmann, S, Ernst, A, Sicheri, F.
登録日2019-01-28
公開日2020-03-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Conformation-specific inhibitors of activated Ras GTPases reveal limited Ras dependency of patient-derived cancer organoids.
J.Biol.Chem., 295, 2020
4JRM
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Crystal structure of beta-ketoacyl-ACP synthase II (FabF) from Vibrio Cholerae (space group P212121) at 1.75 Angstrom
分子名称: 3-oxoacyl-[acyl-carrier-protein] synthase 2, ACETATE ION, GLYCEROL
著者Hou, J, Chruszcz, M, Shabalin, I.G, Zheng, H, Cooper, D.R, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2013-03-21
公開日2013-04-03
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal structure of beta-ketoacyl-ACP synthase II (FabF) from Vibrio cholerae (space group P43) at 2.2 Angstrom
To be Published
4JO6
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Streptavidin complex with SBP-Tag
分子名称: SBP-Tag, Streptavidin
著者Barrette-Ng, I.H, Wu, S.C, Tjia, W.M, Wong, S.L, Ng, K.K.S.
登録日2013-03-17
公開日2013-05-01
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The structure of the SBP-Tag-streptavidin complex reveals a novel helical scaffold bridging binding pockets on separate subunits
Acta Crystallogr.,Sect.D, 69, 2013
4JY6
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Crystal structure of human Fab PGT123, a broadly reactive and potent HIV-1 neutralizing antibody
分子名称: GLYCEROL, PGT123 heavy chain, PGT123 light chain, ...
著者Julien, J.-P, Diwanji, D.C, Burton, D.R, Wilson, I.A.
登録日2013-03-29
公開日2013-05-08
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Broadly Neutralizing Antibody PGT121 Allosterically Modulates CD4 Binding via Recognition of the HIV-1 gp120 V3 Base and Multiple Surrounding Glycans.
Plos Pathog., 9, 2013
6NTC
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Crystal Structure of G12V HRas-GppNHp bound in complex with the engineered RBD variant 1 of CRAF Kinase protein
分子名称: GLYCEROL, GTPase HRas, MAGNESIUM ION, ...
著者Maisonneuve, P, Kurinov, I, Wiechmann, S, Ernst, A, Sicheri, F.
登録日2019-01-28
公開日2020-03-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Conformation-specific inhibitors of activated Ras GTPases reveal limited Ras dependency of patient-derived cancer organoids.
J.Biol.Chem., 295, 2020
6NSQ
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BU of 6nsq by Molmil
Crystal structure of BRAF kinase domain bound to the inhibitor 2l
分子名称: 5-[(4-amino-1-ethyl-1H-pyrazolo[3,4-d]pyrimidin-3-yl)ethynyl]-N-(4-chlorophenyl)-6-methylisoquinolin-1-amine, Serine/threonine-protein kinase B-raf
著者Maisonneuve, P, Kurinov, I, Assadieskandar, A, Yu, C, Zhang, C, Sicheri, F.
登録日2019-01-25
公開日2019-06-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Rigidification Dramatically Improves Inhibitor Selectivity for RAF Kinases.
Acs Med.Chem.Lett., 10, 2019
5VL5
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Coordination Chemistry within a Protein Host: Regulation of the Secondary Coordination Sphere
分子名称: COPPER (II) ION, Streptavidin, [N-(3-{bis[2-(pyridin-2-yl-kappaN)ethyl]amino-kappaN}propyl)-5-(2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)pentanamide](azido)(hydroxy)copper
著者Mann, S.I, Heinisch, T, Ward, T.R, Borovik, A.S.
登録日2017-04-24
公開日2018-04-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Coordination chemistry within a protein host: regulation of the secondary coordination sphere.
Chem. Commun. (Camb.), 54, 2018
4F60
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Crystal structure of Rhodococcus rhodochrous haloalkane dehalogenase mutant (T148L, G171Q, A172V, C176F).
分子名称: FLUORIDE ION, Haloalkane dehalogenase
著者Plevaka, M, Kuta-Smatanova, I, Rezacova, P.
登録日2012-05-14
公開日2013-01-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Engineering enzyme stability and resistance to an organic cosolvent by modification of residues in the access tunnel.
Angew.Chem.Int.Ed.Engl., 52, 2013
4F5Z
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Crystal structure of Rhodococcus rhodochrous haloalkane dehalogenase mutant (L95V, A172V).
分子名称: BENZOIC ACID, CHLORIDE ION, Haloalkane dehalogenase
著者Kulik, D, Kuta-Smatanova, I, Rezacova, P.
登録日2012-05-14
公開日2013-01-23
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Engineering enzyme stability and resistance to an organic cosolvent by modification of residues in the access tunnel.
Angew.Chem.Int.Ed.Engl., 52, 2013
6KJO
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BU of 6kjo by Molmil
The microtubule-binding domains of yeast cytoplasmic dynein in the low affinity state
分子名称: Dynein heavy chain, cytoplasmic
著者Nishida, N, Komori, Y, Takarada, O, Watanabe, A, Tamura, S, Kubo, S, Shimada, I, Kikkawa, M.
登録日2019-07-22
公開日2020-03-18
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structural basis for two-way communication between dynein and microtubules.
Nat Commun, 11, 2020
5T0R
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Synaptotagmin 1 C2A domain, cadmium-bound
分子名称: CADMIUM ION, Synaptotagmin-1
著者Taylor, A.B, Hart, P.J, Igumenova, T.I.
登録日2016-08-16
公開日2017-06-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Non-Native Metal Ion Reveals the Role of Electrostatics in Synaptotagmin 1-Membrane Interactions.
Biochemistry, 56, 2017
5T12
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N-terminal domain of Enzyme 1 - Nitrogen
分子名称: IODIDE ION, Phosphoenolpyruvate--protein phosphotransferase
著者Stanley, A.M, Botos, I, Buchanan, S.K.
登録日2016-08-17
公開日2016-11-23
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.299 Å)
主引用文献Structure of the NPr:EIN(Ntr) Complex: Mechanism for Specificity in Paralogous Phosphotransferase Systems.
Structure, 24, 2016
5T0S
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Synaptotagmin 1 C2B domain, cadmium-bound
分子名称: CADMIUM ION, SODIUM ION, Synaptotagmin-1
著者Taylor, A.B, Hart, P.J, Igumenova, T.I.
登録日2016-08-16
公開日2017-06-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Non-Native Metal Ion Reveals the Role of Electrostatics in Synaptotagmin 1-Membrane Interactions.
Biochemistry, 56, 2017
6O1B
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Crystal structure of the TIR domain G601P mutant from human SARM1, crystal form 1
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Sterile alpha and TIR motif-containing protein 1
著者Horsefield, S, Burdett, H, Zhang, X, Manik, M.K, Shi, Y, Chen, J, Tiancong, Q, Gilley, J, Lai, J, Gu, W, Rank, M, Casey, L, Ericsson, D.J, Foley, G, Hughes, R.O, Bosanac, T, von Itzstein, M, Rathjen, J.P, Nanson, J.D, Boden, M, Dry, I.B, Williams, S.J, Staskawicz, B.J, Coleman, M.P, Ve, T, Dodds, P.N, Kobe, B.
登録日2019-02-18
公開日2019-09-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.67 Å)
主引用文献NAD+cleavage activity by animal and plant TIR domains in cell death pathways.
Science, 365, 2019
5T3S
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HIV gp140 trimer MD39-10MUTA in complex with Fabs PGT124 and 35022
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp160, ...
著者Stanfield, R.L, Wilson, I.A.
登録日2016-08-26
公開日2016-09-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (4.5 Å)
主引用文献HIV Vaccine Design to Target Germline Precursors of Glycan-Dependent Broadly Neutralizing Antibodies.
Immunity, 45, 2016
5T4L
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PLP and GABA Trigger GabR-Mediated Transcription Regulation in Bacillus subsidies via External Aldimine Formation
分子名称: (4R)-4-amino-6-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}hexanoic acid, Aspartate aminotransferase
著者Wu, R, Sanishvili, R, Belitsky, B.R, Juncosa, J.I, Le, H.V, Lehrer, H.J.S, Farley, M, Silverman, R.B, Petsko, G.A, Ringe, D, Liu, D.
登録日2016-08-29
公開日2017-03-29
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献PLP and GABA trigger GabR-mediated transcription regulation in Bacillus subtilis via external aldimine formation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4BLS
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P4 PROTEIN FROM BACTERIOPHAGE PHI12 Q278A MUTANT IN COMPLEX WITH AMPcPP
分子名称: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, NTPASE P4
著者El Omari, K, Meier, C, Kainov, D, Sutton, G, Grimes, J.M, Poranen, M.M, Bamford, D.H, Tuma, R, Stuart, D.I, Mancini, E.J.
登録日2013-05-04
公開日2013-08-21
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Tracking in Atomic Detail the Functional Specializations in Viral Reca Helicases that Occur During Evolution.
Nucleic Acids Res., 41, 2013
5W0J
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Antiparallel coiled coil hexamer formed by de novo peptides (ACC-Hex2).
分子名称: CHLORIDE ION, peptide 1
著者Spencer, R.K, Hochbaum, A.I.
登録日2017-05-30
公開日2017-10-04
最終更新日2022-12-14
実験手法X-RAY DIFFRACTION (2.201 Å)
主引用文献The Phe-Ile Zipper: A Specific Interaction Motif Drives Antiparallel Coiled-Coil Hexamer Formation.
Biochemistry, 56, 2017
4JMR
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A unique spumavirus gag N-terminal domain with functional properties of orthoretroviral Matrix and Capsid
分子名称: Env protein, Gag protein
著者Taylor, I.A, Goldstone, D.C, Flower, T.G, Ball, N.J.
登録日2013-03-14
公開日2013-05-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A Unique Spumavirus Gag N-terminal Domain with Functional Properties of Orthoretroviral Matrix and Capsid.
Plos Pathog., 9, 2013
4JQO
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Crystal structure of anabolic ornithine carbamoyltransferase from Vibrio vulnificus in complex with citrulline and inorganic phosphate
分子名称: CHLORIDE ION, CITRULLINE, DI(HYDROXYETHYL)ETHER, ...
著者Shabalin, I.G, Winsor, J, Grimshaw, S, Domagalski, M.J, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2013-03-20
公開日2013-04-17
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.082 Å)
主引用文献Crystal structures and kinetic properties of anabolic ornithine carbamoyltransferase from human pathogens Vibrio vulnificus and Bacillus anthracis
To be Published

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件を2024-08-14に公開中

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